Os12g0566100

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0566100| Description = Complex 1 LYR protein family protein| Version = NM_001190082.1 GI:297729294 GeneID:9268407| Length = 3330 bp| Defin...")
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Gene Name

Os12g0566100

Description

Complex 1 LYR protein family protein

Version

NM_001190082.1 GI:297729294 GeneID:9268407

Length

3330 bp

Definition

Oryza sativa Japonica Group Os12g0566100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23458856..23462185

Sequence Coding Region

23458856..23459102,23460279..23460376,23461244..23461288,23461784..23461861,23462051..23462185

Expression

GEO Profiles:Os12g0566100

Genome Context

<gbrowseImage1> name=NC_008405:23458856..23462185 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23458856..23462185 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacggacgaagagctggtaaggcctcaggctagcggggccaagaacatgggattcgccaagttcgattccatgtcggagctgcactgcaagattcccactgtcctagttcattgggggcttggcttgatgagactgaagagtgggtggaaggagatgccttcgattcaaaaggctttgcctccagagcttgctgataatgtgatcagactgtaccgtgaatgcttaaggagggccaggttcattgggcatcagaaacacaatacggggcttattgtttcaatggtaagggagcagtttaagaaaaacatgcatgaaactgatccagagaagatacagaaaatgaaggatgaatggaagaggcatgtaggaaaggaactgatcagggatgatgaattcagagacgcctggagagaaaaggagctttggcctgtcaaaatgggaccatttctcagggaattccctgctgggtgtgacacactacttactgtctgcagatcaaatgatggtgaaagaacacaaagaacaatgcctccttgtgcacacaattctcatccagccatcagctatggacctcaagagatggatcattctgcctga</cdnaseq>

Protein Sequence

<aaseq>MTTDEELVRPQASGAKNMGFAKFDSMSELHCKIPTVLVHWGLGL MRLKSGWKEMPSIQKALPPELADNVIRLYRECLRRARFIGHQKHNTGLIVSMVREQFK KNMHETDPEKIQKMKDEWKRHVGKELIRDDEFRDAWREKELWPVKMGPFLREFPAGCD TLLTVCRSNDGERTQRTMPPCAHNSHPAISYGPQEMDHSA</aaseq>

Gene Sequence

<dnaseqindica>3084..3330#1810..1907#898..942#325..402#1..135#atgacgacggacgaagagctggtaaggcctcaggctagcggggccaagaacatgggattcgccaagttcgattccatgtcggagctgcactgcaagattcccactgtcctagttcattgggggcttggcttgatggttaggttaaccttcgttttcagatcgatggttggtctggtgtggggaagttttcagatcgatggttggtctggtgtggggaagaatgcccggcagggcgattggttgtggtagaattggatatttttgtgggttaactagaggtttgatcttttttttttggttacatgttttcagtgactggttcagagactgaagagtgggtggaaggagatgccttcgattcaaaaggctttgcctccagagcttgctgataatgtgatcagagtaagtctcagttctgcgttacgccttttccgatcgacgacatcaacacgacctgtgtgtggtgatgagcagtcagtcctgaatttttacatgtatggttggatcagttctatagtcagtcccaaattttcttacatgtatggttattggtttgagcagctctatagtcagtcccgaattttcttacatgtatcatctatggttattggtttgagcatttctatagtcggtccctaatttctacatgtatggttctttggttagaacagttctacagtcagtcttgtaaatgttttacatgtatagttagagcagctctatcagtgaatcaccctaaaactttacaaaagcttttccaaaacatgtctgtcatgcccgtgtagcctgatttttcgttgtgtttatttatgagataccattgcaatgaaatgaaataatgtcagatgaggcaaaaatgtcatttgctgttgaacattgttttttttcatgttgtagctgtaccgtgaatgcttaaggagggccaggttcattgggcatcaggtacacatatttggttttcacttttccatcttattatcttgtgttgcgtgtactctttctgaacacatatcaactcgcagttctctaccaagtaagggtgtgttcggatgagcaggtcaggatctgctcatcccagcacgcaaaacgaaatggctcattagcgtatgattaattaatatgatttttaaagccactttcctatagaaaatttttgcaaaaaaaaaaacacactgtttagtggttcagaagtgcgcgcgtggaaaatgagggaatataagctgggaaatggtagtgccgaatgaagcctaaaaagtataattatcccattttcagctcatcctttagacttgtattccaaatggaattttgggatactttcctttgttttcttttcagaaatctgtctaattatcccattttcacttcatcctttagacttgtattccaaatggaatcttgggatactttcctttgttttcttttcagaaatctgtctaattatccattttcagctcatcctctagacttgtattccaaatggaatcttgggatgctttcctttgttttctttttagaaatcttatctaatgaactgatgcttttctggaaaaatcacatagtaataaggattattattatttttaggtacttcatattgatctccataaaatgtagatgaaagatgcaaccggttaatcttttataaagtttgcaagattcatgagagtcaggtacacagtgtgcaataaaatccggcaaacctaagattaagaactctttcctttttcttttcctgattttatgggatatcttgtatcaacttgcacatgttttttcctgactgaattgtcatgtcttgtaactcagaaacacaatacggggcttattgtttcaatggtaagggagcagtttaagaaaaacatgcatgaaactgatccagagaagatacagaaaatgaaggatgagtaagttacttctctttccacaccattgtttggatgatacttcttatcgtttggtactttatattgtttgtacatatcttctaattgattcttgctgtgcagtgcggcaaggggccttatcaatcacattttgtatgaatctgagaagatgacaggacgcaaattttcaagttaagaaatttggaactagacaatcagtgtgctgtatgaataatagtaaacagtgatgtgatcttgtggttgctgaattactttgttttttttttggcacaaggatcaactaatcctttgatgggtcattgagttattaaggtggttgttttctttggtttcatctactgtggctcttgactcttgaggtgtttcacccaagcttgcaatatgctacttgggcaggtcatcttgaaacctggaaatatgaatcttcagtgattgataatgctttctttcagaaatcagatccataataatttatagtcctttctcctgtgatccatcgaatattgaaactttgcacagctactgtgtatgctgatcgatcaacttgagtatgatgtgttttgctcgtgtttcctggttccatctccatggaacagaactacacccacaacttgcaatagtgcaaactgtaagcattcatggcgatggttttttggaacgtagttttatggatcaaaattctgggagcatctggagctttctgaggatcccaggtggtagtctgtagtatggaaacagtttatacagtgaaaaagcttgcaaatatgaaatgcatctttgtcagaaatatgatatatgattgcattgtgctcactgttcaaaactgagtagtgttatcctttcattctctcgtacaaatgttgagcaatctcttcagagttcagtttcatcagttctacaggccacagaggcatttcagccgttcttttcctccaacaagaaacaactagtccaggcttgacttactggagtgacacaattcattccaattattcagtgtcacatctgtagatttctggatgttctgcctgtctcttatcacctaacatgcctttggatctgctatctgaactttttgattgatccatctacaccctctataggaattgtcacattgctatcaacaatctgaaaaaaaaaaggtgagataaaaccaatggcaatgcatcaaagtagatggaagaggcatgtaggaaaggaactgatcagggatgatgaattcagagacgcctggagagaaaaggagctttggcctgtcaaaatgggaccatttctcagggaattccctgctgggtgtgacacactacttactgtctgcagatcaaatgatggtgaaagaacacaaagaacaatgcctccttgtgcacacaattctcatccagccatcagctatggacctcaagagatggatcattctgcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0566100, RefSeq:Os12g0566100