Os12g0566300

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0566300| Description = Similar to ATP citrate lyase beta (Fragment)| Version = NM_001073584.1 GI:115489129 GeneID:4352549| Length = 3874 bp...")
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Gene Name

Os12g0566300

Description

Similar to ATP citrate lyase beta (Fragment)

Version

NM_001073584.1 GI:115489129 GeneID:4352549

Length

3874 bp

Definition

Oryza sativa Japonica Group Os12g0566300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23478921..23482794

Sequence Coding Region

23479057..23479155,23480276..23480452,23480537..23480779,23480960..23481011,23481095..23481209
,23481304..23481385,23481526..23481621,23481705..23481806,23481891..23482005
,23482110..23482228,23482393..23482464

Expression

GEO Profiles:Os12g0566300

Genome Context

<gbrowseImage1> name=NC_008405:23478921..23482794 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23478921..23482794 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctcaagcgcctcgccgccatcgacctccacatcctctccgcccaggtcacggaatcaactgatttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttggttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacctagatcttgctcaagtccgccaattcgtcaaagagcggttgggagttgaggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttccacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagcttctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttcttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgccaccctaccgttagaggttcggacaaaaataggtgatttcatcagaggtgtatattctgttttccaagacttggatttctcattccttgagatgaatccgttcaccatggtgaatggggaaccatatcctctagacatgagaggagaattggacgacacagctgcctttaagaactttaagaagtggggaaacattcagttccctctgcctttcggaagagtcctcagcccctctgaaagctttatccatgaactggatgagaagacaagctcatcgctcaaattcacagtcctgaacccgaaagggcgcatttggacaatggttgcaggtggtggtgctagtgtcatatatgctgatactgttggagatttgggatatgcgtcagagcttggaaattatgcagaatacagcggcgctcccaacgaggaggaggttctgcagtatgctagagtggttttggattgtgccactgctgatcctgatggccgtaagagagctcttctcattggaggtggtatagcgaacttcactgatgtcgctgctacattcagtggcatcattcgagctttaagagagaaggaatccaaattgaaggctgcacggatgaacatttacgttcggagaggtggtccaaactaccaaactggccttgccaaaatgcgtacactaggtgcagaacttggtgttccaattgaggtatatggaccagaggcaacaatgactggaatctgcaagcaagccattgattgcatcatggctgaagcataa</cdnaseq>

Protein Sequence

<aaseq>MARKKIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELV NQEPWLSSMKLVVKPDMLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKAPI TTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTP DACAPLIATLPLEVRTKIGDFIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGEL DDTAAFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMV AGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRA LLIGGGIANFTDVAATFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLG AELGVPIEVYGPEATMTGICKQAIDCIMAEA</aaseq>

Gene Sequence

<dnaseqindica>137..235#1356..1532#1617..1859#2040..2091#2175..2289#2384..2465#2606..2701#2785..2886#2971..3085#3190..3308#3473..3544#acgcgacccaagccgatccgcccgcacccgcacacacatcgctcggtcgaaggaggaggttctagaaacttctggaagcggcggaggtgtggggagagagagagagagagagagagagagagagaggcagagagccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacctcaagcgcctcgccgccatcgacctccacatcctctccgcccaggtacaccacatccatctacctctctgttcctcgcgcttggatcggctcgtggtttggtggaattccgcgtggatctcggcgctcggggatcggagcgtgtggattcggcgacctctcgcggtttggcctcgtaggatcttcgggggggggggggggggggagggggggtaagggttggagttctgaggtgttttggactcggaggtgtgctccgattaggcgaaattctgctcaaagagggctcaatttcgtgttgtcaactggtgattgtagctgtggctgtagctgccggctgatgtggaagtatatgtgatttgttagaatggttagtacctggcaacgaaatctgtttgggtgattgggcaaaatacatttgaattggataaaatgagaatggggaattgtttacagcaatcgtacacttccactgctgctaagcttttcgcatatttgatgcaacctgcgatcatcggagcatcctttgtgctatgggatctcattagtggtatgatggtatgatgcttttgtttgtgggttggatgggtcatgtgatgcacaaggtgtgtcttagatctgttgcgatgatggtgtaaactctgtctgaggtattgctttattgtccttaccaaggttttggtttcggtgtctggttttcctaatgaaattccactgctggtaggtgaactggttggtagcttttgacttggagtgctctgcttttgatatttggttacctttcttttgatttttaaccataatggtagacgtttaatgtgcgctaccgaggtccaaagcttcatcttggatctgagattcaacatctctagtttgggttaggataatcttgctctgatggtgtaggctcatgttgaatttcagtaccatctatgaaaagctaagtgttgtcatatttctaaataccagataggaacaagcaatctattctgatttcctttgaactcaaaagcacactcagctgtgttagaatagctacgcttatgggtgaaaaagagtgaagttagttttgatatattcttgactgcattagcttttgttctgcagtagtttgtgtttaatagtgccgcaatccatgactaatttgaactgtactttttcttaggtcacggaatcaactgatttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttggttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacctagatcttgctcaagtccgccaattcgtcaaagagcggttgggagttgaggtagttatacattttcccatgctttgcctctaaaaccttgttagttataactattctaagctatccggtatgcctgttatgcaggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttccacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagcttctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttcttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgccaccctaccgttagaggtacgcttatacattgtatcaccttccccatgtcacgttgttttttttttaacatgttgacttttctcccattctggactcaattcctctagtgttagaacttattattgatgatacctattttggtctgcattagccatcttgtgctcatgtcattcacgtcttctgtctgaatttcaggttcggacaaaaataggtgatttcatcagaggtgtatattctgttttccaaggtaattcacagttgaaaaataaaaataatctggaattgttgttttccaagataactcagttcattctattgatcttctggcagacttggatttctcattccttgagatgaatccgttcaccatggtgaatggggaaccatatcctctagacatgagaggagaattggacgacacagctgcctttaagaactttaagaagtatgattcaggcttttttttttctagcttacatagtgtccagttcaatcctttcaccatgcttgtcatgctaaccagagcttccatggcataggtggggaaacattcagttccctctgcctttcggaagagtcctcagcccctctgaaagctttatccatgaactggatgagaaggtaacctcatatttctttctttcccctctgaagtctgctgcctgttagtacatatcacttaaatttggatacaaattgaatttcactgcctctgcatgcaaaatattgaatcttgaattgaggttgatgtaatttttcagacaagctcatcgctcaaattcacagtcctgaacccgaaagggcgcatttggacaatggttgcaggtggtggtgctagtgtcatatatgctgatactgtaagtctaactctatccagatcttttttaggttaagttttgaagtttatcagtgccattcacacactggacaatatcaccaggttggagatttgggatatgcgtcagagcttggaaattatgcagaatacagcggcgctcccaacgaggaggaggttctgcagtatgctagagtggttttggatgtaagggctccagaggaaccttttcggctgacagtttgatcattatgtttccgctctgacaaaatgatatttgaatctttgtagtgtgccactgctgatcctgatggccgtaagagagctcttctcattggaggtggtatagcgaacttcactgatgtcgctgctacattcagtggcatcattcgagctttaagagagaaggcaagtttcgattggatcgttgttctgtccccaaccactcccacttgttgccattaaaatcttcatccatcttattattgtctggcttccaaatctggtggcaggaatccaaattgaaggctgcacggatgaacatttacgttcggagaggtggtccaaactaccaaactggccttgccaaaatgcgtacactaggtgcagaacttggtgttccaattgaggtatggacctactggctacttactatgttcttccagcaaaccttagctcagccatttcctacactatttatcagaattcgtcagagattaactttattagacataggacaccattggaccatccccatgatcataacggacgagctgaattcactgaattgcaggtatatggaccagaggcaacaatgactggaatctgcaagcaagccattgattgcatcatggctgaagcataattcagacaactatttgcgctgttcccagcttgagtccattttgtttcagaaattgtcagtgtgaggtgttgcctttctctctgagggaatgtgtgctgttgttggtgtaaaacaaaacaaagaaagatcgtattgttagaataaactacatctgtaagtttgtaacgtaattacgcaataatgttaatgtttgtttctagttctgaattctctgtgccttggttggtggccttatccaccaaactcaaagagggttcttgattttgtcatgtatgagagacagtgaaatggagggcttagtgacaggaactgcgttgttgtggcttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0566300, RefSeq:Os12g0566300

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0566300&oldid=6093"