BGIOSGA007412

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Revision as of 02:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007412| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007412, complete gene.| tag = OJ1020_...")
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Gene Name

BGIOSGA007412

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007412, complete gene.

LocusTag

OJ1020_C02.21

Ensembl Transcript ID

BGIOSGA007412-TA

Ensembl Protein ID

BGIOSGA007412-PA

Length

4763

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1240831..1245593

Sequence Coding Region

1240831..1240857,1241420..1241693,1242047..1242422,1243759..1243977,1244310..1244448
,1244582..1244830,1245294..1245593

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1240831..1245593 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1240831..1245593 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTACCCACCGACTTCGACATCAAGGTGTTGATTGAGCGGCACGAAGCCCTGACGGACGACGTGCAGGAGATGCTGCAGCATCAACGCCGGCGACACCAGAAGACGGCGAGCGGCGGCCGGGAGCGGATAGCCACCGTCGACCACCTCAGGCGCCTCTGCATGGACCACTACTTCCAAGACGAGGTCGACGACGCCATGGACGCCTGCCTGCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTTGACGCCACCCTCGCCTTCCGCCTCATGAGAGAAGCTGGCCACCATGTCTCAGCAGATGAGGTTCTTGGAAGATTCACAGATGATAATGGCGAATTCAGGCTCGATTACAGAAAGGACATCAGAGGGTTACTCAGCCTGCAAGACATATCACACATGAACATTGGACAAGAAGCCTCACTCTGCAAGGCAAAGGAGTTCTCAACCAGGAACCTTGAATCTGCCATCAACTACCTCGAGCCAAATCTTGCAAGATATGTGAGGCAGTCGCTGGATCATCCCTACCATGTCAGCCTGAATCAGTACAAGGCCAGGCACCATCTCAGCTACCTCCAGACCTTGCCTATCCGGTGCACTGCCATGGAGGAGCTCGCACTTGCAGACTTCCAGCTCAACAAGCTACTCCATCAGATGGAGATGCAGGAGATCAAAAGATGGTGGATGGACCTGGGATTGGCTCAAGAAATACCAGTTGCCAGGGACCAGGTTCAGAAATGGTTTGTGTGGATGATGACAGCCATCCAGGGTGCCTCCTTGTCAAGATGCAGAATTGAACTCACAAAGATCGTCTCCTTTGTCTATATTGTGGATGATATTTTTGATCTGGTTGGCACACGTGAGGAGCTCTCCTGCTTCACTCAGGCAATCAGAATGTGGGACCTTGCAGCTGCTGATTCCTTACCTAGCTGCATGAGATCATGCTTCAGGGCTCTACACACAGTTACAAATGACATCGCAGATATGGTCGAGAGAGAACATGGAGTAAACCCTATCAATCATCTGAAGAAAGCTTGGGCAATGCTGTTTGATGGATTCATGACAGAGACAAAATGGTTGTCTGCTGGCCAGGTTCCTGACTCAGAGGAATACCTAAGAAATGGAGTTGTCACCTCAGGAGTGCCACTTGTATTTGTACACCTGCTGTTCATGCTAGGGCATGATGTGAGCCAAAATGCAGCAGAGTTTGTTGATCACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTGAGACTCTGGGATGACCTGGGCAGTGCCAAGGATGAGGCACAAGAAGGATTGGACGGATCGTACAAGGAGCTATACCTCAAGGAGAACCCGGGGCTCGCCGCTGGCGAGGCGGAGGAGCACGTGCGGCGGCTGATCGCGGGCGAGTGGGAGGAGCTCAACCGGGAGTGCTTCTCCGCTAGCCCCAGTAGATCGTCGCCGGCGACGACCTTCCCCGCCGGCTTCACGCAGGCGGCGCTCAACGCCGCCAGGATGGTCGGCGTCATGTATGGCTACGACGGCGAGCGGCGGCTCCCCGTCCTCGACGACTACGTCAGGATGCTGCTCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MLPTDFDIKVLIERHEALTDDVQEMLQHQRRRHQKTASGGRERIATVDHLRRLCMDHYFQDEVDDAMDACLLEELAHGGDLLDATLAFRLMREAGHHVSADEVLGRFTDDNGEFRLDYRKDIRGLLSLQDISHMNIGQEASLCKAKEFSTRNLESAINYLEPNLARYVRQSLDHPYHVSLNQYKARHHLSYLQTLPIRCTAMEELALADFQLNKLLHQMEMQEIKRWWMDLGLAQEIPVARDQVQKWFVWMMTAIQGASLSRCRIELTKIVSFVYIVDDIFDLVGTREELSCFTQAIRMWDLAAADSLPSCMRSCFRALHTVTNDIADMVEREHGVNPINHLKKAWAMLFDGFMTETKWLSAGQVPDSEEYLRNGVVTSGVPLVFVHLLFMLGHDVSQNAAEFVDHIPPVISCPAKILRLWDDLGSAKDEAQEGLDGSYKELYLKENPGLAAGEAEEHVRRLIAGEWEELNRECFSASPSRSSPATTFPAGFTQAALNAARMVGVMYGYDGERRLPVLDDYVRMLLF</aaseq>

Gene Sequence

<dnaseqindica>1..27#590..863#1217..1592#2929..3147#3480..3618#3752..4000#4464..4763#ATGCTACCCACCGACTTCGACATCAAGGTAAGCTACGTACCCTAATTAAACAATTATTTAGGTAGCTACTTTCTCTATTTTGTACTATTATAGTCATTTTGTTTTTTCCAATCAGAATGTCAAATATGTTTTTATGCTACTCCCTTCGTAGCAAGAGTTAGAAATATTTTATATTTAAGTTCTTTTGCAAATAAGTTGTTACTATTTGTAAGTCTCTATATATGCAAGACTTTAATAGATAAGTAAATTAAATGTTTGATCAGAGATCATCCGATGAGTCATCTTAATACTCATTGCATTTGTTGCATACGTGTGCATGCAATTCTTGATCTTTGCTATATGTAGAATAAGTTAATTTTTCTTTGATCATGGTGCCAAAAGTAATATGTATAATTTTTATGAAAGAAGGGAGCTAGTATGTTTGTTTTATATTAAAAATGTTATTAAAAGTTTAACTTACATAAAAGTCAAAACGAACATGTTATCAAATAGTGAAAATTAGGTAGCTAATAATGAACACCATGCATGATACTACTAATCAATATATTTGATTAATTGCTAATCTAGCTCGTGTTTAATTGATCTGCAGGTGTTGATTGAGCGGCACGAAGCCCTGACGGACGACGTGCAGGAGATGCTGCAGCATCAACGCCGGCGACACCAGAAGACGGCGAGCGGCGGCCGGGAGCGGATAGCCACCGTCGACCACCTCAGGCGCCTCTGCATGGACCACTACTTCCAAGACGAGGTCGACGACGCCATGGACGCCTGCCTGCTCGAGGAGCTCGCCCATGGCGGCGACCTGCTTGACGCCACCCTCGCCTTCCGCCTCATGAGAGAAGCTGGCCACCATGTCTCAGCAGGTGAGATGATCACTCTTTATGTGCGAACGCGCGAAAGGGTTGCACGTCAATACTTTAGAAGAAAAAAATTATAGTTACACAACGCAATCAGCTAGATCGGCTTATACCAGGAGAAGGGAGAAAAAGCAAAATAAAAAGCTGAAGCTTAAAAAACTACAGCAGCTAAATACAAAACTCCAAGCAGTTGAGAGGGGCCGAGCCACGCTACACTCCCAACAAATCCCAAAAACGGCAACACCAGCTAAAGAACACAGATGGCCCTCCGAGGGTGTGAGATGATCACACACTAATGATCATATATCATATGTTACAGATTAATCAATCAACTAACCATGATTAATTGTCAATTGCAGATGAGGTTCTTGGAAGATTCACAGATGATAATGGCGAATTCAGGCTCGATTACAGAAAGGACATCAGAGGGTTACTCAGCCTGCAAGACATATCACACATGAACATTGGACAAGAAGCCTCACTCTGCAAGGCAAAGGAGTTCTCAACCAGGAACCTTGAATCTGCCATCAACTACCTCGAGCCAAATCTTGCAAGATATGTGAGGCAGTCGCTGGATCATCCCTACCATGTCAGCCTGAATCAGTACAAGGCCAGGCACCATCTCAGCTACCTCCAGACCTTGCCTATCCGGTGCACTGCCATGGAGGAGCTCGCACTTGCAGACTTCCAGCTCAACAAGCTACTCCATCAGATGGAGATGCAGGAGATCAAAAGGTACATATTACAGTACATACATTATTGAATCATTGATATACATACTAGCTAGCTAGCTACTCCCCCCGTCCCAAAATATAAGAACATAGGATTAGATGTGATATTTTCCAATACTATGAATATGGACAAACATCATGTCCAGATTTGTAGTGCTATAAAATATCTCATCTAGTACTTGTTATAATTTAATTTTTGTTGTAACAAAACAACAATGATTCTTACTTAGTTGAAACACACTTGTATCGAACAATAGTACGATTCATAGAATCATAGAAACTTACTATCTCCGTTCTAGAATGTAAAAGGCTTTAGTGTTTAACACGGTAATCAAGAAAGTAGGTAGAATTAGGTGGTGTTTGAATCTCCTGAAGACGAAGATGAAGATAAAGATTAAGTGTTTCATACAAACTTGAAAGATGGATTGATCTGATTTTTTAGAACAACTTTCATATAAAAAGTTTTCGTATGAAACGCACCGTTTAGTAGTATGAAAAGCGTGCCAATTTATCCAAAAGTTTATCTACTTTTTTAGTGGATTCGAAAGGGACCTTAAATGGAGAGATGTTGTGATTAGGGTTGTGAACCTATAATTGGTTGGAAAAAGAATATCAATGGAGAAATTATAATATGTTGGGATAAATTCTTAGTTGTAGAAAGGAAGGAATACATGCATAGTCATAGCTACTTGCTATAGTTTAATTTCCTGTATTAATTGAACAACCGTGTTTCTTCTTAATTAGTTAGTTGAAACACACTTGTATCAAACAACTGTAAGAATATTCATAAGTAGGAGTAGTACCTTGCTCTTCCATGCATAGCTACTTGCTGTAATTAATTTCCTGTATTAATTGAACAACCGTGTTTCTTCTTAATTAGTTGAAACGTGCACGCTTGTATATATCAAACAACTGTAAGATTCATAGTACCTTACTCCTAGCTACTTGCTGAGTAATTTCCTGTATTGACTGAACAACAGTGTTTCTTCTTAATTACTTTATTCATTTTATAATATAAAAGATTTTAGATAGATGTAACATATACTAGTACAATAATGAATCTAAACAGTCTGACACATCCTAGTACCAGATTCATTGTACTAATATGTGTCCCATCCACCTAAAATCTTTTATATTATAGGACGGAGAGAGTATCAAACAACAATGTGATTCGTAGTAACTTACATGCATGCCAACTACTTGCTGTATTAATTGAAACAACAGTGATTCTTCCTAATTAGTTGAGCAGTTGTATCAAACAGCAGTGGTTCATAGTTAATTTGCTGGATTAAACTTTGACTATGAGTGTCTGAAAATGATAATATGAACTATGCATGCAGATGGTGGATGGACCTGGGATTGGCTCAAGAAATACCAGTTGCCAGGGACCAGGTTCAGAAATGGTTTGTGTGGATGATGACAGCCATCCAGGGTGCCTCCTTGTCAAGATGCAGAATTGAACTCACAAAGATCGTCTCCTTTGTCTATATTGTGGATGATATTTTTGATCTGGTTGGCACACGTGAGGAGCTCTCCTGCTTCACTCAGGCAATCAGAATGTAAGTCTCAGCTTAAGATAGATAATTAACATGAGTCTTCAACATACATTTGATTTTCCCTATTCTCTTTTTTCTTATTCACTGGATTATTTGCTCTACACATAGAGATATGATTTTTCAAAAACTTCTTGTCTAGCTATTTTATTTCTTAGACTACTTATTACTAATATAAGCCATTTGTTACATTTATAATATTTAATATTTAATTTGTCCCTATAATCAAGTAGATATATACCATCAACTTTCATTCGCGAATAATCTATTTAGAACAGAGCCTTAATTTAAATTGTTATTATGATTATAAGTAACAATTAATAATGATTTTTTTACAGGTGGGACCTTGCAGCTGCTGATTCCTTACCTAGCTGCATGAGATCATGCTTCAGGGCTCTACACACAGTTACAAATGACATCGCAGATATGGTCGAGAGAGAACATGGAGTAAACCCTATCAATCATCTGAAGAAAGCTGTAAGTAATTTTTCGTTTGTGTTAGAACATTTTTTTAAAAAAATCTCATTCACAACGAATTTGCAGCAGGACTGACCATGCATATGCAATGCAATTGACTGAACTTTCTTTCTACCATGTGTATCTTGTGCAGTGGGCAATGCTGTTTGATGGATTCATGACAGAGACAAAATGGTTGTCTGCTGGCCAGGTTCCTGACTCAGAGGAATACCTAAGAAATGGAGTTGTCACCTCAGGAGTGCCACTTGTATTTGTACACCTGCTGTTCATGCTAGGGCATGATGTGAGCCAAAATGCAGCAGAGTTTGTTGATCACATCCCTCCTGTCATCTCCTGCCCAGCAAAAATCTTGAGACTCTGGGATGACCTGGGCAGTGCCAAGGTCAATACCTTTTTCTCACCATGTCAAACATGCTACTCCCGGCCCTTCAATTTCTTTAATATAGATAATGTCGTTGTCTTCTGTACATACATCGTCTGGCTACTGTATTTGGTTTATACTTTAAGTATGACTTACATTTTTTTTCATATTTACATAATTTTATTTCTAATAATATGAATAGTTAAACACATGTTAAAAATCAACGATGTCATATTTATTAAAAACCGGGGGAAGTAATTACTACACACTTATACGTAGCAAATTAATCTTATTCTTCTTTGAAATCTTATTCTCATGTTTTAAATCAGCGCCCACACACACATCAAAGCAATATGGTATCTCTGATATCTTCTCTAAGGATTGTAAAAATATAATTATTTTAAAAAAATGTTTAAAGTTGTATGGGAGATTGATCTTTGCTGGGCCTATCGTGAACTGAAAATGTATGAAATAAAAATTGTAGGATGAGGCACAAGAAGGATTGGACGGATCGTACAAGGAGCTATACCTCAAGGAGAACCCGGGGCTCGCCGCTGGCGAGGCGGAGGAGCACGTGCGGCGGCTGATCGCGGGCGAGTGGGAGGAGCTCAACCGGGAGTGCTTCTCCGCTAGCCCCAGTAGATCGTCGCCGGCGACGACCTTCCCCGCCGGCTTCACGCAGGCGGCGCTCAACGCCGCCAGGATGGTCGGCGTCATGTATGGCTACGACGGCGAGCGGCGGCTCCCCGTCCTCGACGACTACGTCAGGATGCTGCTCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007412