BGIOSGA007428

From RiceWiki
Revision as of 02:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007428| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007428, complete gene.| tag = P0575F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007428

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007428, complete gene.

LocusTag

P0575F10.37

Ensembl Transcript ID

BGIOSGA007428-TA

Ensembl Protein ID

BGIOSGA007428-PA

Length

4431

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1403233..1407663

Sequence Coding Region

1403233..1403713,1404708..1404775,1404886..1405017,1406633..1406794,1407340..1407663

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1403233..1407663 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1403233..1407663 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCCGCGACGGAGACCACGGCGACTTCGCCGGCTGCGGCTGCCGCTGCGCAGCCGGAGGCGGAGGCGGAGGCGGAGGCGGAGTCGGCGGCGACGCCGGTGGCAGTGGCGGCGGCGGCGGCGGCAACCTATCAGCCGCCAGCGCCGGTGGTTCCAGTCGCCGTGGCAGGTGCGGCGGCGGGGAGAGGGAACGGGAAGAGGAAGAGGGGGAGGCCGAGGAAGTACGGGCCGGACGGGAGCCTGCTCCGGCCGCTGAAGGCGACCCCGATCTCGGCGTCGGTGCCGGACGACTCCGGCGGGGGGCAGTACACGCCGGCGGCGGCGGTGGGGGCCGTCATGAAGCGCGGCAGGGGCCGCCCCGTCGGGTTCGTCAGCCGCGCGTCGCCGGTGTCCGTGGCCGTGACGGCCGCCACGTCCACCGCCGCGGTGGTCGTCTCGTCTCCGGCCACCCACACCCAGACGCCGCTCGGGCCGCTAGGTGAATTGGTAGCATGTGCTTCTGGTGCAAACTTCACACCTCATATCATTAACGTTGCTGCTGGCGAGGATGTTAATATGAAGGTCATATCTTTCTCCCAACAAGGTCCAAGGGCAATTTGCATTCTGTCTGCTAATGGGGTGATTTCAAATGTTACATTGCGTCAGCAAGATACTTTAGGTGGTACAGTGACTTATGAGGGCCGGTTTGAGCTGCTCTCCTTATCCGGATCATTCACGCCAACTGATAGCGGTGGAACGAGAAGCCGCTCCGGTGGAATGAGCGTCTCGTTGGCGGCCACGGATGGCCGTGTCATCGGAGGCGGAGTTGCCGGCCTCCTTGTGGCTGCAAGCCCTGTTCAGGTTGTGGTAGGAAGCTTCCTGCCGAGCTACCAGCTGGACCAGAACGCCACCAAGAAGCCCGTCATCGAGATCACGACGGTGCCGCCGCCGCCGCCGGCCATCGGCTTCACCATCTCCAGCGGCGACCCTATGGAGGACTCCTACAGCGGCAGCCATGGCCAGCACCGCTCCGGCGCCGCCGCGGCGACGACGACGACGGCGAAGGCCAACTCGACGTCGGCGTTCAGGTTGGAGAACTGGACGCCACCGGCGCCGCCGGCGGCGGAGGCGGCGAGGACGAAGACGCCGTCGTCGGAGGCCAAAGTCCCAGTCCCCGGAGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEPATETTATSPAAAAAAQPEAEAEAEAESAATPVAVAAAAAATYQPPAPVVPVAVAGAAAGRGNGKRKRGRPRKYGPDGSLLRPLKATPISASVPDDSGGGQYTPAAAVGAVMKRGRGRPVGFVSRASPVSVAVTAATSTAAVVVSSPATHTQTPLGPLGELVACASGANFTPHIINVAAGEDVNMKVISFSQQGPRAICILSANGVISNVTLRQQDTLGGTVTYEGRFELLSLSGSFTPTDSGGTRSRSGGMSVSLAATDGRVIGGGVAGLLVAASPVQVVVGSFLPSYQLDQNATKKPVIEITTVPPPPPAIGFTISSGDPMEDSYSGSHGQHRSGAAAATTTTAKANSTSAFRLENWTPPAPPAAEAARTKTPSSEAKVPVPGA</aaseq>

Gene Sequence

<dnaseqindica>1..481#1476..1543#1654..1785#3401..3562#4108..4431#ATGGAGCCCGCGACGGAGACCACGGCGACTTCGCCGGCTGCGGCTGCCGCTGCGCAGCCGGAGGCGGAGGCGGAGGCGGAGGCGGAGTCGGCGGCGACGCCGGTGGCAGTGGCGGCGGCGGCGGCGGCAACCTATCAGCCGCCAGCGCCGGTGGTTCCAGTCGCCGTGGCAGGTGCGGCGGCGGGGAGAGGGAACGGGAAGAGGAAGAGGGGGAGGCCGAGGAAGTACGGGCCGGACGGGAGCCTGCTCCGGCCGCTGAAGGCGACCCCGATCTCGGCGTCGGTGCCGGACGACTCCGGCGGGGGGCAGTACACGCCGGCGGCGGCGGTGGGGGCCGTCATGAAGCGCGGCAGGGGCCGCCCCGTCGGGTTCGTCAGCCGCGCGTCGCCGGTGTCCGTGGCCGTGACGGCCGCCACGTCCACCGCCGCGGTGGTCGTCTCGTCTCCGGCCACCCACACCCAGACGCCGCTCGGGCCGCTAGGTATGGAAATTTTTGAGAAATTTTGCCGTAATTTCGAAAAATTCAGGTGAAAGGCCTGCAACTTTTTTTTGGTTCGTCTTAGGATAAAGATAATAAGCCTGTTTAGTTGGAGTTTAGTTGGGGTGGTGACTTGTGAGAGAGACAAGGCTTTTAGAGGAGAGACAGACAGGGACTGTCTACTGATCTAGTCTAGGTAGGTGAACTGAAAACTGAAAGAGGCCTGCAGCTTTCAGGTTAAGGTTGTTTCTGCTTGGACCTGTAGTACCAGGTGCTACTAGTACCTTGGTTCTGCCTACTGTGTGTCATGGTCTCATGGACTCATGGTTGGGTTTCAGAGTTATGAGTGTCTTATCTGAGGTTTCAGACTTCAGGTTATGAGTTATGCAAAACTTGATGAATTTTGTAGACAAGTTACCAGTAGGTATCACTATTCAGAAAGCCTTAGTTTGAGATTTCAGGGGAAACAGTACTACAGTAGTTAAAACTTCAACTCATCATGCTGTTTACTGCTTAGAACCTCTGTTGGGTGGTGTGGAACTGAAAACCTGCAACAGGCGTTTTGGTGTAAATACCTTCAGTTGTGAATTGTGATGAGATGTAGTCTGTTCCTATCTATTTGGTTAGGGTGGCAAGAATAACCATGGATGAGATGATATTAGTTGCTGGTGATTTTGAATCTAGTTTTGTCTGGGTGTATTTTACTGCAAATACTATTTTTTATGCATTAGTTGAATAAAGTTGTTACTTAGGTGATAAGGTGTGCATGTGGAAAAATACTACTACTATTTTGTATGCATTAGTTGCATAGAGTTCTTACTGGTAATTGTATGTTCATGTGCGCATGACAGTATGAGCCTACAATAAATTGAAATTTGTTCAAGGATAGCATTTCGCCTCCATACTTGATAAAAACACAAAGGCTAAAAAATATGAGAAGTGCATGATGTCCTGAAAGCTTTATTTCTCTCAATGCTGAGAACCTGTTGATGGGCAGGTGAATTGGTAGCATGTGCTTCTGGTGCAAACTTCACACCTCATATCATTAACGTTGCTGCTGGCGAGGTAAGATGTCACTGATTTTTTCTGTTTCCTCTTCTTGCTCTCACAATGTTAATAGCCTTGTCTACTAAATTTGCTTGAATGGTGTTACCAACTTAATTTTGTTATGCCAGGATGTTAATATGAAGGTCATATCTTTCTCCCAACAAGGTCCAAGGGCAATTTGCATTCTGTCTGCTAATGGGGTGATTTCAAATGTTACATTGCGTCAGCAAGATACTTTAGGTGGTACAGTGACTTATGAGGTTTGTTCTTTCCACCTCCAAATTAATATTCATGTTTCTTTTTGCAATTTTCTTGCTCTGCTTGTACAATATGCAAAACAGATATATCACCCGCATTTAATTTATGAACTGGAAAGGACAATCGATTGAGTCTTGTTATACTAGCCATATTACACTTTTTACTCGATTATATTGGCCTCTCAAGTTCATTATCATTGGTCTTGCATGTTGTTAATGAAACCTTTTACACTAAAACCATCTTTTTGATAATCTTATGATGACTTTTTTTTTTACTTAAGTCTAATGTAACTTTTGGTCCTGGCAAATATGAATTGCAAACAACATGTAAAACTGTGGAGGAAATATTTTGAAAAAGAAAATGTTGATTGTATGATTGATATGGAGTCAAAGTTGAGTGGCCCAAAAGTTTTGGTATAGTCAGTATGCAGGTTGAGGATTTTATGTGTTTCAATAAGCTAAGCAGAAGCTGTAGGCATGTGGTTTTCAGCATGCTGTCCCTGTTCTAGCGTGTGAAAACTGATTTTTCTTTAATCCTAGTTCTCCAGTTAATCTGGGCAAGAACTGTAGCTTTAAACCAGATCAGTTCACAAAAAGGAACCAAAACAACCAAAGAGATTCCTATAGAGACATTATAACTTTCTAAAGGGTGAATTAATAAGTAAAGACACAGTTTCCTTTTTGCAGTATTGATATTTTTTCTGCAATTTCGATTAAAAAACATTAATATCAACCTTACTGGTAGCAATGATGAATAGTTTAAGGTATAAGTGAGCGCTTTGTTTTAGTCTAATGAGAGTGTCGAACAGTAAAAGCAGTAAACAGCCAGGGCTTCATCAGTTCCACAACTAGTGGAATTGCACAATGGAAAATATGGCCACTTTCTAGGACTTTGTCCCAGGAGAATACGATTTACAATTGGAGGAAATATCCGCCACCTTGAGAGCAGTTGATTTTCTTAGAGAAAAAAAAAAGAGTAGTTGAAATTTTTTTTGAACGAATGAGTAGTTGAAAAATCAAATGGTGTAAATTATATGTCATAATACAATTCACATGATTTGACTTGAGTATATGGGTCTAGTAATAGTCATGATCAGGACTTCTCCGTGACCCAAAATAATCTTTGTTTCTTCACTTTACTACATGATGAAAGTTAAAAAAATGCAAGGAAATTAGGTGGAAACTAACAGGAGACCACCTGAAGAACTTGCATGGAAATTATGTGTGCATTTCATAGCATGTACATATGGATCCAGTCGGACGTTGTCAGCACTCAGCACTTAACAGTGGAAAAAGTGTGCCTAATGTATATATTGACAATGGAATAATTCCAACACCTAGCTTTTCCACACAAGCACATATGTACTATTCGAACAAACTTTTCAAGTCCAGTCTGCAGTACAATTCCTCTGTTTATATACTGTACGTGCTAATGACTGATCAACTAATGTTCATTTCAATCATATATGTGTGCATATCCACTCTTCATCATGCAGACTTGTTTCGATCTTCTAATCATAGATGTGCATATAGCCATGTCTATTTTTGTATCAAAGAACTTGATTAAAACTTTTCTCTCTAAATTCCTAACTGATCAATGTGCTGTTAATTTAATCAGGGCCGGTTTGAGCTGCTCTCCTTATCCGGATCATTCACGCCAACTGATAGCGGTGGAACGAGAAGCCGCTCCGGTGGAATGAGCGTCTCGTTGGCGGCCACGGATGGCCGTGTCATCGGAGGCGGAGTTGCCGGCCTCCTTGTGGCTGCAAGCCCTGTTCAGGTGAACCCTTTTTTCAGCTTGTCCAGAATTATTATCATGGACTATTGCTCAATGTTTCTAAAAATACAATTTTTCAAAAAAAAACCTTCTATTCTATTTTGAAGCTATTTGTAAGGTTTATAAATATATAATATTTAATTTATTCCTATAATCAATCGGCTTGAATTTGTGGATAATCTATTTAGAATGCTACCTTAAGCTCCATGGATTGTGTGTTCCAAAGTGTTGATGAATGATAGACGAAACTGAGTTTATAACAATTATTCGAGGGCACAAACAAATGGATTAAGTAATAGAAAAGTTATAAGTTTGATTTATCAAAGTTATCTAAAAACTATTGATATTATAACTTATAAGAAAACCAAGTGTACCGTCTAGAAGCTTGAGAAGAGTGTCCGCGATAATCCGTCATCCATTATATATAAAAAAAAGAACGTGCTGTACTTGATATTCAGATTACTCAACAATGACATATACTCATCCATCTGCTTTGCTTGCTGTTGGCAACAACCTGATTGAGTCGATTGATTGCTGTTCTCTATCAGGTTGTGGTAGGAAGCTTCCTGCCGAGCTACCAGCTGGACCAGAACGCCACCAAGAAGCCCGTCATCGAGATCACGACGGTGCCGCCGCCGCCGCCGGCCATCGGCTTCACCATCTCCAGCGGCGACCCTATGGAGGACTCCTACAGCGGCAGCCATGGCCAGCACCGCTCCGGCGCCGCCGCGGCGACGACGACGACGGCGAAGGCCAACTCGACGTCGGCGTTCAGGTTGGAGAACTGGACGCCACCGGCGCCGCCGGCGGCGGAGGCGGCGAGGACGAAGACGCCGTCGTCGGAGGCCAAAGTCCCAGTCCCCGGAGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007428