BGIOSGA007432

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Revision as of 02:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007432| Description = cDNA clone:J023078I12, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA007432, complete gene.| ta...")
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Gene Name

BGIOSGA007432

Description

cDNA clone:J023078I12, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA007432, complete gene.

LocusTag

OS02G0125600

Ensembl Transcript ID

BGIOSGA007432-TA

Ensembl Protein ID

BGIOSGA007432-PA

Length

5413

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1429585..1434997

Sequence Coding Region

1429585..1429977,1430235..1430669,1431274..1431829,1431936..1432204,1433036..1433360
,1434474..1434611,1434750..1434997

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1429585..1434997 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1429585..1434997 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTACTTTATGCTGATCCTCCTCCCCCAATAAAACCCCCTGAAATTAAAATCAAAGAACTAGCAAATAAGTCTACATATGAGTCCTCAATGATGGAGCAAAAGACAAGACTGCACGCCATTGAGCGCCACAGGTCGTGTGAAGTGAGTCAAGCAATCTTATCTGAGGTAGAAAATCGTCATCAACATCAAACCCTTGAGCCCATCAAAAGCCCAATATCTGGGTGTTCTCCTTCAGTAGAATCAACTACAGACACCAACACAGTACACAGGCATACGGTTGCAGATGCTGCTTGGGAGGCCCTAAAGAAATCAATAGTTCACTTCAGAGGCCAGCCAATTGGAACTGTTGCTGCAATAGACAAGTCTCAGGGAGCACTCAACTATGACCAGGTTTTCATGAGGGATTTTGTTCCTAGTGCATTGGCTTTCTTGATGAAAGGAGAACCAACAATAGTGAAGAATTTCCTGTTAGAAACTGCTCGCCTTCAGTTAAGAGAGAAGATGGTTGACCTCTTTAAGCTTGGTCAGGGTGTGATGCCAGCTAGTTTCAAGGTGCACCACTGCAACTCTAAGCACAAAACTGAAAGCCTGCTTGCTGATTTTGGTGAAACTGCCATCGGAAGAGTTGCTCCTGTGGACTCTGGCTTATGGTGGATTATTCTTCTTCATGCTTATACCATATGGACAAGGGACAATTCTCTGGCTGAAAGTCCTGAATGCCAAAGGGCAATGCGTCTTATTCTCAAATTGTGTCTCTCTGAAGGGTTTGATACATCTCCAGCTTTGCTTTGTGCTGATGGCTGTTCCATGATTGACCGAAGAATGGGTATATATGGCTATCCGATTGATATCCAGGCTCTGTTTTTCATGGCTCTGAGATGTGCCGTTACTTTGTTGAAAGAAGATCACAACGACGACTTTGTGTACCAAATATCAAGGAGAATCAAAGCTTTGAGCTACCATCTGCACAGTTACTACTGGCTTGACTTCCAGAGGCTGAATGAGATATACCGCTACAAGACAGAGGAGTACTCAGAGACAGCCTTGAACAAGTTCAACGTGATACCAGAATCAATCCCTGACTGGATATTCGACTTCATGCCCAGCCGCGGCGGGTACTTCATCGGCAACGTCAGCCCTGCGAGGATGGACTTCCGCTGGTTCTGCCTGGGCAACTTCATCGCGATCCTCTCCTCGCTGACAACCGGAGAACAGGCTGAAGCAATCCTGGACCTTGTGGAGGAGCGCTGGGAGGAGCTCATCGGAGAGATGCCCATGAAGGTGTGTTACCCCGCGATGGAGAACCAGGAGTGGCAGATCGTCACCGGGTGCGACCCCAAGAACACCAGATGGAGCTACCACAATGGAGGATCATGGCCAGTGTTGCTGTGGCTGCTGGTGGCGGTGAGCGTGAAGCTGGGGCGGCCACACATCGCGAGGCGGGCGGTGGAGGTGATGGAGAAGCGGCTGGTGAAGGACGAGTTCCCGGAGTACTACGACGGGAAGGCCGGGAGGTACGTGGGGAAGCAAGCGCGCAAGTTCCAGACGTGGTCCGTGGCCGGCTACCTGGTCGCCAAGATGCTCCTCGACGACCCCTCCAACCTCCGCGCCGTCTCCCTCGCCGACGACTGCCACATCCGCTCCGCCCCCCTCTCCCTCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGACCGGCGTGGGGCTTGTCGACCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGGCAAGATGAGTCCCCTTCTCAGCCCAAGAAATAG</cdnaseq>

Protein Sequence

<aaseq>MVLYADPPPPIKPPEIKIKELANKSTYESSMMEQKTRLHAIERHRSCEVSQAILSEVENRHQHQTLEPIKSPISGCSPSVESTTDTNTVHRHTVADAAWEALKKSIVHFRGQPIGTVAAIDKSQGALNYDQVFMRDFVPSALAFLMKGEPTIVKNFLLETARLQLREKMVDLFKLGQGVMPASFKVHHCNSKHKTESLLADFGETAIGRVAPVDSGLWWIILLHAYTIWTRDNSLAESPECQRAMRLILKLCLSEGFDTSPALLCADGCSMIDRRMGIYGYPIDIQALFFMALRCAVTLLKEDHNDDFVYQISRRIKALSYHLHSYYWLDFQRLNEIYRYKTEEYSETALNKFNVIPESIPDWIFDFMPSRGGYFIGNVSPARMDFRWFCLGNFIAILSSLTTGEQAEAILDLVEERWEELIGEMPMKVCYPAMENQEWQIVTGCDPKNTRWSYHNGGSWPVLLWLLVAVSVKLGRPHIARRAVEVMEKRLVKDEFPEYYDGKAGRYVGKQARKFQTWSVAGYLVAKMLLDDPSNLRAVSLADDCHIRSAPLSLTRRRLHPGPDLLTLSSPRLRAGLRLARAAAGEAPVETVEAPPSKPEAEPSPAASNGAAVKAEKPPAAAAAPPLPKFRDSRWVNGTWDLRQFEKGGAVDWDAVIDAEARRRKWLEDCPEATSPDEAVVFDTSIIPWWAWMKRFHLPEAEKLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIETVKKLIDETTFYDKQWQATWQDESPSQPKK</aaseq>

Gene Sequence

<dnaseqindica>1..393#651..1085#1690..2245#2352..2620#3452..3776#4890..5027#5166..5413#ATGGTACTTTATGCTGATCCTCCTCCCCCAATAAAACCCCCTGAAATTAAAATCAAAGAACTAGCAAATAAGTCTACATATGAGTCCTCAATGATGGAGCAAAAGACAAGACTGCACGCCATTGAGCGCCACAGGTCGTGTGAAGTGAGTCAAGCAATCTTATCTGAGGTAGAAAATCGTCATCAACATCAAACCCTTGAGCCCATCAAAAGCCCAATATCTGGGTGTTCTCCTTCAGTAGAATCAACTACAGACACCAACACAGTACACAGGCATACGGTTGCAGATGCTGCTTGGGAGGCCCTAAAGAAATCAATAGTTCACTTCAGAGGCCAGCCAATTGGAACTGTTGCTGCAATAGACAAGTCTCAGGGAGCACTCAACTATGACCAGGTTAGCATTTCCTTCACAATTGAACCATGGATATAACCATTTAGCCATAAAGGTTCCTTAATATTGTTACTATTATCTCTATATAACCTTACCAAATACACTCAGCACATGCCACTCTTAGAATATTCAGATAGGTAAAATAATGATGGGTGTGATTATTTCTCTTCCTGTAAAAAAACCTAGAAACTCATAATTCTCCTTATACATGGACATCCAATGCAATTGACAATGATAAAGTTCTTGTCACTCTGGAGCAGGTTTTCATGAGGGATTTTGTTCCTAGTGCATTGGCTTTCTTGATGAAAGGAGAACCAACAATAGTGAAGAATTTCCTGTTAGAAACTGCTCGCCTTCAGTTAAGAGAGAAGATGGTTGACCTCTTTAAGCTTGGTCAGGGTGTGATGCCAGCTAGTTTCAAGGTGCACCACTGCAACTCTAAGCACAAAACTGAAAGCCTGCTTGCTGATTTTGGTGAAACTGCCATCGGAAGAGTTGCTCCTGTGGACTCTGGCTTATGGTGGATTATTCTTCTTCATGCTTATACCATATGGACAAGGGACAATTCTCTGGCTGAAAGTCCTGAATGCCAAAGGGCAATGCGTCTTATTCTCAAATTGTGTCTCTCTGAAGGGTTTGATACATCTCCAGCTTTGCTTTGTGCTGATGGCTGTTCCATGATTGACCGAAGAATGGTAAGCCACTTAAACCCAACATTGCTTTGTTTTGTTATTGATGGTATGTCTCTTAACTGTTTGCTTACTTTCCTACTAGAGTGTTAACAGTCCTGATGCATTGTCAGAAGTATTATCTTGATCAAAGTTGAAATTGCATTAGGTTTGTTGTAGTAACATATACTGACGCTTTTGAATTTATTCAATCTGGGGTTTAAAAGGAACTGCCTTCTGTCAGGTCCTGCCTATTCGGTTTATTATTGACTGCAGAAACATTAAGAATGGGATAGGGTAGAGCATTACTTTTAGTTGCCATGAGCAATATGTACATGTTAAAACAGTTATTTACAATTCTGGGTATGACTGTTTTCTTTTCAGTTAATCCAGGCATTGATATCAGGATTTTTTAAAAAATATTTGGGCTGTTAACGGAAGAGACGTAATGCTGAATGGTTATAGTGGTACCTTCTGATACATGTTTATGTTGTTAAAGATCGGCTTGTTACATATTAATCAATTGGATGCTCTTAAATTTGGGATAGCAAATTATCTACTTGTCAGCATGAACATATTTCTGCATGGTTATCTTTCCCTTACTTACAGATTGCAATCTGTGCATGTGCAGGGTATATATGGCTATCCGATTGATATCCAGGCTCTGTTTTTCATGGCTCTGAGATGTGCCGTTACTTTGTTGAAAGAAGATCACAACGACGACTTTGTGTACCAAATATCAAGGAGAATCAAAGCTTTGAGCTACCATCTGCACAGTTACTACTGGCTTGACTTCCAGAGGCTGAATGAGATATACCGCTACAAGACAGAGGAGTACTCAGAGACAGCCTTGAACAAGTTCAACGTGATACCAGAATCAATCCCTGACTGGATATTCGACTTCATGCCCAGCCGCGGCGGGTACTTCATCGGCAACGTCAGCCCTGCGAGGATGGACTTCCGCTGGTTCTGCCTGGGCAACTTCATCGCGATCCTCTCCTCGCTGACAACCGGAGAACAGGCTGAAGCAATCCTGGACCTTGTGGAGGAGCGCTGGGAGGAGCTCATCGGAGAGATGCCCATGAAGGTGTGTTACCCCGCGATGGAGAACCAGGAGTGGCAGATCGTCACCGGGTGCGACCCCAAGAACACCAGATGGAGCTACCACAATGGAGGATCATGGCCAGGTACGTACGTACTATAGCAGTATAATCTCCAAATGTTGTGCATCGATCTGCAGCTGTTTCTTGTGGATGACAATCATAATTGATTGGAATGATGATGATGGATCAGTGTTGCTGTGGCTGCTGGTGGCGGTGAGCGTGAAGCTGGGGCGGCCACACATCGCGAGGCGGGCGGTGGAGGTGATGGAGAAGCGGCTGGTGAAGGACGAGTTCCCGGAGTACTACGACGGGAAGGCCGGGAGGTACGTGGGGAAGCAAGCGCGCAAGTTCCAGACGTGGTCCGTGGCCGGCTACCTGGTCGCCAAGATGCTCCTCGACGACCCCTCCAACCTCCGCGCCGTCTCCCTCGCCGACGACTGCCACATCCGCTCCGCCCCCGTCCTCAAGCGCAGCAACTCCTTCCCGTGATGATCAACACAATGCTCAAACTAAGCTCACACCGCACTTCACATATACTCACCACCACCACGTAATTAACGCTGCCTCGCTGTTAATGTTCTTATACGTACTTAGTAGTAGAAGTACTGGTAGTAGGAATTTGGGTGCACTCGTTTCACCGGATGCCTCAGCTGGTGGAGATTTTGGTAGCTTGGAAGTGCACGCGCAAACCTTGGGGTGGAAATGGATTTTTTTGATCAGGATGTTGGGACGCTCATGATTAGACCTGGATGGCTTTGATGATAGTGGATTGATTGTCCATCCACATTGATGTCGAATCTCTTCTGCTTATACTGAGCTTGTTGTTCTTGTTGTTTGTCGGTTTAGAAACCAGGTCATTTGTATCTTGACGATCAACTGGGTGCTGCTTGTTGAAACGTTGAGTAGTTGTCGCTGCCATTCGATACTGCACACTTGCATTTAATAGTGAGTTTCTATTACACTGTGTTGGTGTACGAAAGGAAAGCGTGGTGGTGCTAAGCTAGTGTTATCTCGGCCACAAGCCAATCAAAGGCACACGTAGGACGAGACCCCATCCAACCACCCCAGCCACGTCAGCAAGAGGGCCCACCCTGACCTGCCACGTGGGCAAGAAAAAGGAAGAGCGCACTCCCACTCCCACCCAAAGTGAAGTCCCAAGCGCTCACGCTAGCCTCTCATTTCCGCCTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGGTGAGGCTCAGTTCGTCTGCCTCCCTATTCCTCTCTATGCTTCAGTTTGCTGTTGCTGCCTTGCTGCTGCTGCTGATTAATTAGCTAGCACTACACTAATGGCGGTGGAATTCATAAAATCTACTACTAGAGTACTAGTAGCTAAGCATTGCATAACTGCATAGTACTACTTCAGTATTAGGACTCCTTTATCAGCCATTAGTTATTTGGTATTTACTTGATGAATCTCAGAATGTTTGCATGAATTGTCGTGGATACGATTGATGGGAGTGCCGTCTCGGCACTGCGACTTCAATTCCAGTGTGGTTTTTTAGCTGGGTTGCTACTGTGCTTTGATGAACCCATTGCTATGCCCTCTGGCCCCTGGATCTGTTTGTGCTTATATTGGAGTTTGGAGCTTACTTCCCATTAGTCTCAGTGATAGTGACAGTGACCTTCCATCTGCTGAAGCGAGGAACCAGCTTGCTGACAACAACACCTACAGTGCTATCCATTCAGGTTCCTGTTCTCTATGGCTGTACAACTTCAATAATCAGTGCGCCGCAAAATTATAAAAATAAAACTTCAATAATCGGTGGAGCATGATTAGATGGATAGCCTCATCTAGATGAAGTTTCTTAAAAAAAGGATGAAGTTTCTAGCGTGTCACCATTAATTTGCTTGATAACGTATGTAGAAGATGATGTAAACTGCTAGACACAGTACACTTGCTTTTACAGTTCAAGCTGCTGGGAGTGCCCTTGCAAAAAAGAAAAAAAAAACGAAAGCTAGGTGGACATGGGAAGCGCTGGAGTGCTAGGTTGGATAGGGAAGAGAGATCTGTCGTGTGTGCACAACTAGAGTTTGAACTGAACTGAAATCCAATTGATTTATGTTCTGAAACTGATCTTTTTTTTTTCTCAGCTGATTTGCATTTCTGTACGTAGCTTGTGTTTTTTTAATTTATGAATCGGTACAAACAAGATGTCTGCCAATGATGTGTAAACTTATGGCACTTGTCATTGTGCTGCAGTGAATGGAACAAAATGGGATTCCTTACTATCTAATGAGGCCGACTGACATAACTCCTTGGAAATGTTGCAATCATCTGATGCCATATTTGTTTGTTTGCAGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGTCATTCTTGAATCCTTCTCCTTTTCAAAAGCTGAATTCAAAAGTTTTTACTTGCATCAAGCCACATGTGCAAACAAACCACGTGCATGGGAAAGAAGAATTCATCACTTCTAACATCACACTCTTATGTCTCTGCAGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGACCGGCGTGGGGCTTGTCGACCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGGCAAGATGAGTCCCCTTCTCAGCCCAAGAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007432