Os12g0566900

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0566900| Description = Protein of unknown function DUF895, eukaryotic domain containing protein| Version = NM_001073590.1 GI:115489141 GeneI...")
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Gene Name

Os12g0566900

Description

Protein of unknown function DUF895, eukaryotic domain containing protein

Version

NM_001073590.1 GI:115489141 GeneID:4352555

Length

7486 bp

Definition

Oryza sativa Japonica Group Os12g0566900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23511687..23519172

Sequence Coding Region

23512035..23512217,23512364..23512487,23512586..23512698,23512917..23513007,23513101..23513336
,23513979..23514023,23514177..23514290,23514370..23514433,23518619..23518782
,23518902..23519120

Expression

GEO Profiles:Os12g0566900

Genome Context

<gbrowseImage1> name=NC_008405:23511687..23519172 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23511687..23519172 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagacggccacgctcccgccggagccgagctcgcggtggccctcgacgaggaggaggaggaggccgccccgctggtatccggcagacgcggcgccgcggcggcggcgagggcggcgacgtcccagacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtcaacacggacgagaacctggggtcggtgtcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctcgtcccctcctggtacacaatggtgccagcctccctgtatctgggttttactgcatcgatcatctgggttgggcagggtacatatctcacgtctgctgccctcagtcatgcaagagacaataatttgcctgaaggccaaactttggggaacttcaatggagagttctggggaatgtttgctagcacacaggtcattggaaatttgatctctcttgcactactgagagatggaaaggatggaggaagtgtcacggggaaaagtctgctgtttgttgtgtttcttggctgcatgattgtcggcattatattaatgtgtttactttccaaaagggacgagaaaggaaataatgctccaacacattcctcatttggggctatgatgaagtatattgttgcccctctcaaggaccgaaggatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatgggctgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggagccatggcaatatatggtgcagccgatgttgtttgttcattggttgctggacgtttgacctctgggcttcattcagctacatctatcgtttcggttggagctattcttcaggctgtagtcctgttctggttacttcttttttacagtccaatgggtggactgcttggtgcagcagttccactgtttataggtgccttatggggtgttggtgatggtgtcttgaatacacagttaagtgcattacttgggctgctgttcgaggatgtcaaggaggcagcttttgcacagttgaaggtttggcaatcgggtgccatcgcagtcatcttcttcctgagcccaaatattacgctacaagccatgcttatcttgatggccactgcgctcatcatctctttcggcgcattcttgttacttacacttgttgtggagaagccatcgaccgtcagatcgtga</cdnaseq>

Protein Sequence

<aaseq>MEDGHAPAGAELAVALDEEEEEAAPLVSGRRGAAAAARAATSQT RDLHLLSSAFLFVFLAYHAAQNLQSTVNTDENLGSVSLGLLYTSFTAFSVVGSPVVRR MGSRRALVLGTSGYLLFIAANLVPSWYTMVPASLYLGFTASIIWVGQGTYLTSAALSH ARDNNLPEGQTLGNFNGEFWGMFASTQVIGNLISLALLRDGKDGGSVTGKSLLFVVFL GCMIVGIILMCLLSKRDEKGNNAPTHSSFGAMMKYIVAPLKDRRMILIIPLIAYSGLQ QAFVWAVFTKNIVTPVLGISGVGGAMAIYGAADVVCSLVAGRLTSGLHSATSIVSVGA ILQAVVLFWLLLFYSPMGGLLGAAVPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEA AFAQLKVWQSGAIAVIFFLSPNITLQAMLILMATALIISFGAFLLLTLVVEKPSTVRS </aaseq>

Gene Sequence

<dnaseqindica>6956..7138#6686..6809#6475..6587#6166..6256#5837..6072#5150..5194#4883..4996#4740..4803#391..554#53..271#gcagtttggcaccgaagccacgccaccaccaactcctccccccaaatccgccatggaagacggccacgctcccgccggagccgagctcgcggtggccctcgacgaggaggaggaggaggccgccccgctggtatccggcagacgcggcgccgcggcggcggcgagggcggcgacgtcccagacccgcgacctgcacctgctgagctcggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtcaacacggtagccgaatcgattcaattcgaccgatcgatcgatcacgcagacgcggcctccatggattcagattaatccgatcggatttggtgttttgcattgctggtgggtgggtggggttgcaggacgagaacctggggtcggtgtcgctggggctcctgtacacgtcgttcacggcgttctcggtggtgggctcgccggtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctcttcatcgccgccaacctcgtcccctcctggtaaaacctaaccaacctgctcgatcccttcctcctcctcctccctatcacagcgtagattagcactagcgaatagtggaatggatgaaactctgaataattcagaaattcagacgagtctgactgatttctttttctgaattctgacggttcatctgacttgtttagctagaagaaaatggggatttgggagtgagttgaataatgaaggaatcccgggggtggtatttgcaaaaatgatttcgtcattttatttttggggttagattagcatttgcttgacagccggccagggccttactatcggaagcgtttaaattaaagatttgtcttgattatctacactcgcagttgagccgtagccaattttgaattttagaaacaatttaggttattttatcgcttttgtcactcagttttgacttgtgaccggtaagagtagaagcataaaattctcgtgttaaaaatgtatttttcataacattgatcacgtgtcttcatttgtttgaaagatccgattgcctgtctatactataagaatgttgataatggccatgtttaggtgtttatttgttttggcaaaaaaaattgacgtatacggacacacaattgaagtattaaatgtagactaataagcctaattaatccatcattagttgtagcatcacattatcaaattatgacgtaattaggctcaaaagattcatctctcaatttacatgcaaactatgtaattgtttttttcgtttatatttaatgcttcatgtgtccaaacatttgatctgacggaaaagttggaagtttgaaaggaactaaacatagccaatgtctcttcaacttataaatcgtagcctcgaaacaccaaaaatacctttcctaaagtttagatgaatcagttcggcggatatttctcaacaacgctagatggcctatctccaaattcattgcagtccttccatataccgataacttgtgaattgtgatatcttctctttttgaatcgatgaagtataagcgaatcacatatagcggcttgtttctatgcattaggcaacgaaaagaagtagagtgaccgagctgaaagcctgaaacgcaacgatctgattcatctgaagttctgaacatgcattgcccactgccaactgccgactgccaagttgccgaccagaagctgcagcattttgcaccaagaaagtaaggatgaatccgagctgaaacttttggctcaaacgggcgacgaatccggagcaaattatcatcagagtaggataatctcgtcggcagctgatggtttagtttttttgttggagaggcagatggtttaattagtagttccatgatttgatcagatgcgtcacctgacaaagaagatcccccaaattgtatgatactgcttgagctgcaaatggatgcgattaactatttagctccaacggcagcattggattaggatatgaaccaacggccaagccactgtcactgccatccttgaaaaaaaatccaagagcataacaacactggggttgcaggcagcttagcatgtgtttgatttggggatgaggtaagatgggttggactcatccttgtttttaggataggatcattttagagtctcaagatcattctcgttattctaaaaagttctctctctaattggattgaaaatgtgttctagcaaattgctagttttaaagtatttttcagctgtagcacgtttttacgatatcccctagcaaattacacaaactttgagtgccatgtagtaaaatttgtctaaatttttagtctttgaatcttagtctacactatacctaagccaataatccaaaatcatgcatactcataatattgtttgaatctcctgaaaataaagatgaatataaagattaagtgtttcacataaaacgagatggtaataacgtgtgattaattaagttttaattatttcaaacttgaaaaaggattaatctgatattttagaacaactttcatatagaaagttttcgcacgaaacacaccgtttagcagtttgaaaagcgtgcaaccttaatctaaaatttaatccacccttttcatgactaacgaacgggaccgcttcattttacttgtttgggagagttccctaactcccattaccaaacacagcataagagaatacaatcggcaagataggaaaaacgatttactctcatttaaattacttgtctttctaactttaccttgaatcaaacatctctactttctaccatcgttttttaaaaatttgtgtaaacgaagccgaacttcatccaccaattatgccaagcgattgggatcctcttcagtcactgcccactacaccgtgcctttgtcattgatatgtggacctgatgtgtcgtcgggctcatttattagtgacaaaggcatggtgcagtcgactgatctctatcctgataccaagtggtccttgttagttgaaaaattggaagtaactagaaaaaaaaatcttccaaggccagtaggccactgacaaaatgacaagaggcggggacaggaaggaaacgccaaagcagttacctgcaggtggggacaaaccccgcggcttcgagccactgccatgtgggccccacctccgcctccgcgcctcgtcgcctccgctcccctcccatcccctcgctacctcactctacccgctctataaaaggccttctagaaggagcttcccgcctcaagccgcgcggatcgatcgcttctagaagcttccgcctccgccgcgggccatggacgcgcgaggaggccaccaccgcgacgaggaggaggaggcggccgcggcgccgctcctcgccggcgccgcgccgttgggttactcgggccaccgccgtagccacgccggcgacctgcacgtcctctccgccgcgttcctcttcgtcttctccgcctactgcgccgcgcagaacctcgagagctcggtcaacaccgtgagtgtgccatctcgtccctcctcggtcctcgtcctcgtcctcctcgtcgtcgatcggtcgagctgatctcgatcgccgcctttcctgatccgtggatgatgctggccgcaggagggcgacctgggcacggtgtccatggggattctgtacacctccttcacgctcttctcggtggccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctcgccaacctcgtcccgacatggtgcgtgcggccgtacgctcgccttcgcctacggatcccatggttttgggttttgacgccttcgcctacggatcccatggttttgatttttgacatggtccgcatggtatcgctggtgcctaattgggcgtgctggtttggatgcctcacgcctgtttgatgaaatgcctagctagaccgtgttgatatgatgctccttttgctcagacacgggtactactgttgttaatcgatcatatggttttaatttggcggtgcagtgtagctcgtctcaccagtctactgtaagtgtttggttgtgcacggaatgcattttcattttctgataattaaatgctctgttaccctttttggtgtagctgagagcccatacagcaaattagttaaaacaatcgacaagttttttttactatgctactacctcagttttttaattgatgacgtagttgactttttgtcacacgtttgatcatttgttttattcaaaaaatgttatctaattattttttttgtgaattgttttatcactcaaagtattttaagcattatttatatcttatacatttgcataaaatttttgaataagatgaatgaataaacatgtgttcaaaagtcaacggcgtcatctattaaaaaacgtagggagtatttaccagcaacaatgtttcattttcttctttaatatatagcactctcatacaaatatggatggccgatggattctggccctagttgatgtgctttctattatactatgaaatatttcagctgtgcaaaatactattagaaatgaatcctttatgtttaacatatgctgagattctatatatggatgttaatttgtgcaacaaattgtcaggtacacaaaatactattagaaatgaatcctttatgtttaacatattctgagattctatatacggattttaatttgtgcaacaaattatcaggtacacaatggtgccagcctccctgtatctgggttttactgcatcgatcatctgggttgggcaggtatttacttgacagtgtgcttgataagtcttctctggtatccagtaatccagctcacataatatatctcacactgcagggtacatatctcacgtctgctgccctcagtcatgcaagagacaataatttgcctgaaggccaaactttggggaacttcaatggagagttctggggaatgtttgctagcacacaggtatggttgtacaaagctattctccaccaaaacttgccaagacatattttagtatctgttcttcataactcaagtgtagcatctatttctttctgcacatgtgggctctacagatacaaggtgtctttgactatttacatttgaattatgcaggtcattggaaatttgatctctcttgcactactgagagatggaaaggttagcatcttaattttgatcttctcatgtcttatcagaatatcctggactgtcatttgttatatattgtgtaccgctaactagtaactaaagtgaacttcatgatacgtacttttagcatcatgatttgttgcagtaagagaaaatatagttctgatgttaactggagagtcccattgtttcttttattctatcctggaaacttctgttgtacctctatacccaattcaaaatatgtgttctgctaggtttacaaaattgtctcaaaatgcatcgatatattagttgtaacaaaataatgattgcaaacaaaaatattgcagcacactacaagagaactatagaataattgcaatgagcactactgaaaataaatcttaatatttatcttttagatgtacattttaaaataaatatctaaaatattagctgtcctactctaatttcccatgaacttaactattataagatgccctgactcctgaggttagcaatactcaaaagtctaaacccccaaaagtatttgttcaaactgttcatcaatatactagttaaaagtctgtatgacttttgttaaattttgaaaccttttatgttcttaataaaaatcatgcttgatcatgtgattccttgttactccaggatggaggaagtgtcacggggaaaagtctgctgtttgttgtgtttcttggctgcatgattgtcggcattatattaatgtgtttactttccaaaagggacgagaaaggaaataatgctccaacacattcctcatttggggctatgatgaagtatattgttgcccctctcaaggaccgaaggatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatggtaagtactttgtagcgcatattgcctttcgacatttgttgctgtttgatttcttattatgtgctctgtaagataatgctgtgtaatttttagggctgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggagccatggcaatatatggtgcagccgatgttgttgtaagtttaaatcactaaagttgttagcatagcctgatgccatttcactatgaactctctattatcctttccctagggtcctactgttgctattgctttgtgaaagtatggcatatcttgtttcccagttatctataactaatctatatcatgctaaactattgaaaatgccataatttatgttttagctgacttttgatggttacctgacactgcagtgttcattggttgctggacgtttgacctctgggcttcattcagctacatctatcgtttcggttggagctattcttcaggctgtagtcctgttctggttacttcttttttacaggtttggtttcgttaatcgtcactgtgctgttacacctttcttctgcagttatgcttgccattggtatcacagtgagctcatctttctattgcctacagtccaatgggtggactgcttggtgcagcagttccactgtttataggtgccttatggggtgttggtgatggtgtcttgaatacacagttaagtgcattacttgggctgctgttcgaggatgtcaaggtaatatcgttttagttttctttagcttttcatcagcacggtagcgttcttcctatcgatgacggaaaaatataatatatggcatttcatttgctgatacttaaatggatactgaaatgattattttggaaaaatgtcaaatgcaggaggcagcttttgcacagttgaaggtttggcaatcgggtgccatcgcagtcatcttcttcctgagcccaaatattacgctacaagccatgcttatcttgatggccactgcgctcatcatctctttcggcgcattcttgttacttacacttgttgtggagaagccatcgaccgtcagatcgtgaggaaatccgaaatccttttgtccaacagaaaccaattccaaagtggggccaatttcaccacatatcttgatcagtgttaccaacaaccaaagcagcacatactgtatgcacgagcgatacgaaaccaaaaggaaatgaggtatctgtcagttgatgtgcaacacaacaccaccctgactccatttgtttcagcgatttttgctgaattgaagtgattgcattcaaaattagagtgacggccttgtagcaaaatctgttttcctccagttgtttctgttccgtggttgtttctaccaaatgtaacatcagtcaaatatatatgtttataatagctgctcttttgttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0566900, RefSeq:Os12g0566900