BGIOSGA007443

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Revision as of 02:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007443| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007443, complete gene.| tag = P0482F1...")
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Gene Name

BGIOSGA007443

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007443, complete gene.

LocusTag

P0482F12.27

Ensembl Transcript ID

BGIOSGA007443-TA

Ensembl Protein ID

BGIOSGA007443-PA

Length

4030

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1523103..1527132

Sequence Coding Region

1523103..1523158,1524152..1526521,1527031..1527094,1527127..1527132

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1523103..1527132 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1523103..1527132 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCAGCGGACTACAGATTTATAGCCAGCAGCAATACGGGCTCCAAGACGAAATCGCCGTCGCGGCCGAGGAGGCCGCGGCGCTCGACGCGCTCCCGCTCTCCGAGCAGCTCGTGCTGGCCGTGCTCCGCCACCGCCCGCGCCACCTCCCCGACGACGACGCGCTGCTGCTGCTCCGCCTCAGGTTCTTCGACTGGTCGGGGAGCCGCGGGCGGTACTCCCACACGCGCGCCGTGTACCACTCCGTCTTCCGCCTCCTCTCCCGCTCCCGCCGCTCCGCCGTGGTGGTGGACTGGCTCCGCCTCTTCTCCAACGCCAACGCGACCCCCGCCAGGTCGCGCTTCCACGACACGCTCGTCGTCGGCTACGCCGTCGCCGGCGATCCCCAGCGCGGGCTCAGCATCCTCGGTCGCATGCGATTCCGCGGCCTCGACCTCGACGCCTTCTCCTCCCACATCCTCCTCAATTCCCTCGTCGAGGCGTCGCTCCATGAGTATGCTGATTCCTTCGCTCGCCACCTTGCTGCAAGTCCTGTGGCGACCTGCATTCGCATCAAGAGCCTCTGCCGCCAAGCCCGCAGCAGAGATGCCGTGGCTCTCCTGGACACCCTCCCTTTCGACCAAGCATCCAGTGCCCCTGCAGCTGGCTCGATCATCACAGACTTGTGCCGCCGTGGGCGCTTTGATGATGCAGCTCAGATTGTTGACAGGTTCCCCTCCGCTGATGTGTATGGCTCATGGATTCATGGCCTCGTCGAGGCCGGGAGACTCGACACTACGTTGCAGTTCCTTTCTGAGAAGAAAGAAGCCGAGGGGTATATTCCTGATGGACCTCGGTATGACAAGCTTACGTATCGCTTGCTTCGCAGTAACAGGCTCGGTGAGGTGTATGACTTGCTTGTGGAAATGATGGAGGAGGGCATTGCTCCAGGCCGTTCAACCATGAATGCCGCGCTTTGCTTCTTTTGCAAGGCTGGGCTCGTGGAAGTTGCGGCACACTTGTATCGGTCAAGGATGGAGCTTGGGGTTAACCCTAACAAGGATGTGTACAACAATTTGATCAGGGCTCTTTGTCGGGTTGGGGACACAGAAGAGGCGTGCCTGGTGTTGGAGCAGGCTATGGCAGAAGGGTACTTCCCTGGGCGACAGACATTTACCATGTTTGCAAATGTGTTGTGTCAGGAGGGGAAGCTAGATAGGGTGCGAGTGCTCCTTGACAGAGCACTCAAGCAGGAGGCATGCCCAACGGACAGTGTCTTGGCCAAGTACCTTGTGGCATTGTGCAAGAGTGGGGATGTGGAGGCAGCATGTGCAGTGCCTCAGATGGCAGGCAGCAAAAGTCCTAAGGGCTTATATCGCTACGAATCAACTTACAAGAGCTTGATTCGGGCATTGATATTGATCAGGAGGGTGGATGTACTGCCAAGGCTCTTACTGGAAATGCAAGACATGGGGCACATCCCGAGCCGAAGCCTCTATCAGTCGGTTGTTTGTGCTTTGTGTGAGGTGAGCAGGTATGCTGAGGTTCTGGAGCTGCTGAACAACCAGCTGCAACGGACTGACCTACACCCCCGTGTATGCTACAACTACTTCATCGCTGGGGCTGGGCATGCTAAGAAGGCTGACATGGCCAGGGAGGTATATAACCAAATGGAGTATTCTGGGCTTGAACCATCAGGAGACAGCAATGTCCTTCTTCTTATGAGTTATCTGAGGAGTAAGCGTATTGGCGATGCACTAAACTTCTTCAACTTCATTCGTGACAAGAAGACACCTGGCACCAAGCTGTACAATGTATTCATATCTGGTCTATGTGAAGCTCAGAAGCCAGAGCAGGCAATGGTGTTCTGGAGGGAAGCGAGGGAGAAGGGTTTAGTCCCAAGCATCAGCTGCTATGAACAGCTTGTGCTCCTGTTGTGCTCTGTGAAAGATTATGACAATGTCGTAAAGGTTATTGATGACTTCAAAGAAACAGGTCGCCCTGTTTCGGCTTTCTTGTGTAACGTGCTTCTGTTGCACACATTGAGGGGCAGTGACCTTCTGAAGGCTTGGAAACGTTCAGAGCAGGCAACAGTGAAACCAGAAGAGATCCAGGGTAAGGGGGTAGGACGGTTCTTGATTGGCGAACTTATTATGATGTTTGCAGGTGGTATTAGGAACATGAATGACTTAGAGGATTTAGAAGAGGACCTAGAAAAACATTTTCCAGTTGATGTTTACACTTATAACATGCTGCTGCGAGGGTTGAGCATGGTGGGGAGGATGGACTCTGCCTGTAACTTGTTTGAGAGGCTGTGCCGCAAGGGGTATGAACCGAATCGGTGGACTTTTGATATAATGGTACATGGCTTCTGCAAGAATAGTGACAGGGATGAGGCCGAGAGATGGATGGAAGCAATGCACCGAAATGGGTTCTATCCCACATGTCTATATAAATATCTAATAGACCAAGCTCAAGTTAATCTAGCCTTTTGTATTTTCCAAGCCAAGGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MSSGLQIYSQQQYGLQDEIAVAAEEAAALDALPLSEQLVLAVLRHRPRHLPDDDALLLLRLRFFDWSGSRGRYSHTRAVYHSVFRLLSRSRRSAVVVDWLRLFSNANATPARSRFHDTLVVGYAVAGDPQRGLSILGRMRFRGLDLDAFSSHILLNSLVEASLHEYADSFARHLAASPVATCIRIKSLCRQARSRDAVALLDTLPFDQASSAPAAGSIITDLCRRGRFDDAAQIVDRFPSADVYGSWIHGLVEAGRLDTTLQFLSEKKEAEGYIPDGPRYDKLTYRLLRSNRLGEVYDLLVEMMEEGIAPGRSTMNAALCFFCKAGLVEVAAHLYRSRMELGVNPNKDVYNNLIRALCRVGDTEEACLVLEQAMAEGYFPGRQTFTMFANVLCQEGKLDRVRVLLDRALKQEACPTDSVLAKYLVALCKSGDVEAACAVPQMAGSKSPKGLYRYESTYKSLIRALILIRRVDVLPRLLLEMQDMGHIPSRSLYQSVVCALCEVSRYAEVLELLNNQLQRTDLHPRVCYNYFIAGAGHAKKADMAREVYNQMEYSGLEPSGDSNVLLLMSYLRSKRIGDALNFFNFIRDKKTPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCYEQLVLLLCSVKDYDNVVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLKAWKRSEQATVKPEEIQGKGVGRFLIGELIMMFAGGIRNMNDLEDLEEDLEKHFPVDVYTYNMLLRGLSMVGRMDSACNLFERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGFYPTCLYKYLIDQAQVNLAFCIFQAKA</aaseq>

Gene Sequence

<dnaseqindica>1..56#1050..3419#3929..3992#4025..4030#ATGAGCAGCGGACTACAGATTTATAGCCAGCAGCAATACGGGCTCCAAGACGAAATGTATGTATAACAGGTGGGACTATATACTAATAGTGTAGTATACGTTTATATGCTACTATTGCATGACTTAGCTATTAAATTGACTATAGATGATTTGGAGCTAGTAATTGGCTATACTATTAAACTTGCTCTAGTCACTTTTTGTGTCATAACTATGGGCAAACTAATAGCTTCATCTTTTCGCTTATACTTGTGGTAATTGTAACGGCTCATTAACTAATAAAAAATAATTAATGGACATTTTTTATAAATGTATTCCAAGCGATTTTAAAACAGATGGTGTAAAGTAAATTACTCTCTCCGTTTCAAATTATAAGTCTTTTTATTTTGGTCAAAGTCAAACTACTTCAAATTTAATTAAGTTTGTAGAAAAATATAATAATATTTACAACACCAAATTAGTTTTATTAAATCAATGATTATATTTTCATAATATATTTGTCTTGGGTTGAAAATGTTACTATTTTTCTCTACAAATTTGAACTTAGAGTGATTTTACTTTAACCAAAGTCAAAACGACTTATAATCTAGAACTGAGGGAGTATAATAGAAAACCACAAAATCAACTTAGATTAAGTTTTGAAATTTACATTTTCACTAAGGCTTATAAGACGAAAATTAAACGATGGGGGTTTAAATTTAAAAAAGAGGAAATGGATGCGACGCGTGTTAGTCGAGTAGCCGAGTCCGACCCAAAAACACTCACTCGGCCCACATCACGCCACCACCCCGACCCAACCCAAACTTCTTTTCCACGCCGCCGCCGCCGCCGCCGCCGCCCCACGCCCGATGCCACCCGCCGCCGCCGGCTGCCACCGCTGCCGGCGGCTTCCTCCCCACCGTCCGTTGACCTCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCCTTCCGCGACTGGTTCCTCCTGTCCCGCCGCGGGGCCGCGGGGGCCGCCGCGCCGCCCGCGGCGCTCGACGCGATCTACAGCGCCGTCGCGGCCGAGGAGGCCGCGGCGCTCGACGCGCTCCCGCTCTCCGAGCAGCTCGTGCTGGCCGTGCTCCGCCACCGCCCGCGCCACCTCCCCGACGACGACGCGCTGCTGCTGCTCCGCCTCAGGTTCTTCGACTGGTCGGGGAGCCGCGGGCGGTACTCCCACACGCGCGCCGTGTACCACTCCGTCTTCCGCCTCCTCTCCCGCTCCCGCCGCTCCGCCGTGGTGGTGGACTGGCTCCGCCTCTTCTCCAACGCCAACGCGACCCCCGCCAGGTCGCGCTTCCACGACACGCTCGTCGTCGGCTACGCCGTCGCCGGCGATCCCCAGCGCGGGCTCAGCATCCTCGGTCGCATGCGATTCCGCGGCCTCGACCTCGACGCCTTCTCCTCCCACATCCTCCTCAATTCCCTCGTCGAGGCGTCGCTCCATGAGTATGCTGATTCCTTCGCTCGCCACCTTGCTGCAAGTCCTGTGGCGACCTGCATTCGCATCAAGAGCCTCTGCCGCCAAGCCCGCAGCAGAGATGCCGTGGCTCTCCTGGACACCCTCCCTTTCGACCAAGCATCCAGTGCCCCTGCAGCTGGCTCGATCATCACAGACTTGTGCCGCCGTGGGCGCTTTGATGATGCAGCTCAGATTGTTGACAGGTTCCCCTCCGCTGATGTGTATGGCTCATGGATTCATGGCCTCGTCGAGGCCGGGAGACTCGACACTACGTTGCAGTTCCTTTCTGAGAAGAAAGAAGCCGAGGGGTATATTCCTGATGGACCTCGGTATGACAAGCTTACGTATCGCTTGCTTCGCAGTAACAGGCTCGGTGAGGTGTATGACTTGCTTGTGGAAATGATGGAGGAGGGCATTGCTCCAGGCCGTTCAACCATGAATGCCGCGCTTTGCTTCTTTTGCAAGGCTGGGCTCGTGGAAGTTGCGGCACACTTGTATCGGTCAAGGATGGAGCTTGGGGTTAACCCTAACAAGGATGTGTACAACAATTTGATCAGGGCTCTTTGTCGGGTTGGGGACACAGAAGAGGCGTGCCTGGTGTTGGAGCAGGCTATGGCAGAAGGGTACTTCCCTGGGCGACAGACATTTACCATGTTTGCAAATGTGTTGTGTCAGGAGGGGAAGCTAGATAGGGTGCGAGTGCTCCTTGACAGAGCACTCAAGCAGGAGGCATGCCCAACGGACAGTGTCTTGGCCAAGTACCTTGTGGCATTGTGCAAGAGTGGGGATGTGGAGGCAGCATGTGCAGTGCCTCAGATGGCAGGCAGCAAAAGTCCTAAGGGCTTATATCGCTACGAATCAACTTACAAGAGCTTGATTCGGGCATTGATATTGATCAGGAGGGTGGATGTACTGCCAAGGCTCTTACTGGAAATGCAAGACATGGGGCACATCCCGAGCCGAAGCCTCTATCAGTCGGTTGTTTGTGCTTTGTGTGAGGTGAGCAGGTATGCTGAGGTTCTGGAGCTGCTGAACAACCAGCTGCAACGGACTGACCTACACCCCCGTGTATGCTACAACTACTTCATCGCTGGGGCTGGGCATGCTAAGAAGGCTGACATGGCCAGGGAGGTATATAACCAAATGGAGTATTCTGGGCTTGAACCATCAGGAGACAGCAATGTCCTTCTTCTTATGAGTTATCTGAGGAGTAAGCGTATTGGCGATGCACTAAACTTCTTCAACTTCATTCGTGACAAGAAGACACCTGGCACCAAGCTGTACAATGTATTCATATCTGGTCTATGTGAAGCTCAGAAGCCAGAGCAGGCAATGGTGTTCTGGAGGGAAGCGAGGGAGAAGGGTTTAGTCCCAAGCATCAGCTGCTATGAACAGCTTGTGCTCCTGTTGTGCTCTGTGAAAGATTATGACAATGTCGTAAAGGTTATTGATGACTTCAAAGAAACAGGTCGCCCTGTTTCGGCTTTCTTGTGTAACGTGCTTCTGTTGCACACATTGAGGGGCAGTGACCTTCTGAAGGCTTGGAAACGTTCAGAGCAGGCAACAGTGAAACCAGAAGAGATCCAGGGTAAGGGGGTAGGACGGTTCTTGATTGGCGAACTTATTATGATGTTTGCAGGTGGTATTAGGAACATGAATGACTTAGAGGATTTAGAAGAGGACCTAGAAAAACATTTTCCAGTTGATGTTTACACTTATAACATGCTGCTGCGAGGGTTGAGCATGGTGGGGAGGATGGACTCTGCCTGTAACTTGTTTGAGAGGCTGTGCCGCAAGGGGTATGAACCGAATCGGTGGACTTTTGATATAATGGTACATGGCTTCTGCAAGAATAGTGACAGGGATGAGGCCGAGAGATGGATGGAAGCAATGCACCGAAATGGGTTCTATCCCACATGGTACACTATGAGGATATATAACAATTTAGCGTTGCGATCAACTGATCATAAAGTCATCTCATTTGTATAAGTAATCATCTCTCTGCCACCGCTTTCATGCCTTGGTCTGCTGTGATCCTATGACTTCACTGGAACAGGTAAAACTATTATCAGAACCTTGTTCTATGGTTTTAGTTATTTAAGAAGGTACTCGGTGCGATTCATTTGCTGTTATGTTTTTTGTGTAATTCCTTCTATGTTTTCTTACAACACAAGTCACATTAGACCTTTCGCTGTGTTTTGCACTCTATCTTGGACACACATTAGCGGAGGTAATTTGTTAAACATGACAATTTTCAGTTGGCAGTCGCATTCGAGTTCCACTGTTAGGAACAGGCATGCAGTTGCTTAATAACATGTAAATACATATTTATCTATCCTACTTTTACAAGTCCATTTTGTTTGTACAATTCATACTGCACTGATTGAAAACCTTTTACCGCACATGAATTGGTTGTGATCATTTTTAGTCTATATAAATATCTAATAGACCAAGCTCAAGTTAATCTAGCCTTTTGTATTTTCCAAGCCAAGGTAATTCAGTGCGGTTTTCTGGATGTTTGCAGGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007443