Os12g0567200

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0567200| Description = Diaminopimelate epimerase family protein| Version = NM_001073592.2 GI:297613369 GeneID:4352558| Length = 5104 bp| D...")
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Gene Name

Os12g0567200

Description

Diaminopimelate epimerase family protein

Version

NM_001073592.2 GI:297613369 GeneID:4352558

Length

5104 bp

Definition

Oryza sativa Japonica Group Os12g0567200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23521848..23526951

Sequence Coding Region

23525458..23525547,23525646..23525762

Expression

GEO Profiles:Os12g0567200

Genome Context

<gbrowseImage1> name=NC_008405:23521848..23526951 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23521848..23526951 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattttgactgtaggtgcgacgcttgcttgtggaaccggtgcttgtgcagtagttgttgcagctgtcctcgagggtcgagctgaacggaaatgtgtagttgatttgcctggtggaccattggaaatcgaatggagggaggatgacaatcatatttacatgactggtcctgcagaggctgtcttctatggatctgctgttcactag</cdnaseq>

Protein Sequence

<aaseq>MILTVGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIE WREDDNHIYMTGPAEAVFYGSAVH</aaseq>

Gene Sequence

<dnaseqindica>3611..3700#3799..3915#atgtcgtccgccaccgccgccgccaccgccaccatcgccgccgccgccgcgaagctcgccgccacccccgcccccgccccctcccggcgccgcctcacgctccgcgggaaccccaccgcgcgccgctgcgtcgccgcgatggccgtgtccacccccaggtcggccgccgccgccgcgttcctcgagcgccgcgagtcggagcgcgccctccacttcgtcaagtaccagggccttgggaacgacttcatcatggtgcgacgccttactagcgcttccatttcacttttcttagaaccgatttgttgcttcccttcaatttttttaatcccctttgtaatcagtcgcttcgtctgcacgaattagagcagtctctgctgctttagacgcggtgatttctgtatttttttgatttagtcttggattttttttcttcaggtggacaatagggattcggccgtgccgaaggtgacgccggaggaggcggcgaagctgtgcgacaggaacttcggcgtcggcgccgacggtgtgatcttcgtcatgccgggggtcaatggcgcggactacaccatgaggatcttcaactcggacggcagtgagccggaggtgagcaatccattgcatttctgcagtgcgtgataggaaatgtattcgggtgttggtgttttgtgatatccgtagtgattcgtcaatcataaatgcaatgtggatgatatggactaatctaatgttagcatgatcctcattaggtaggatagtggaaagaaagcgcaaaagctttgcacgttctcaacttctcataaagtttcttgtgtccctgaattgttaggcggggatacttagcctgaaaattaactgtgcaagtgtgtactagctgcttatagctctccatgtagattaggccttgtactagtttaatccacactcagaataggtcatagggaacttaagtgaaatctgctggtactctatacaatgctggggatctaattcgttgattattcattatctttaatctgtatgtgtatgtcttaagtgtgtatttttactctattacattttaaccaacccctacatgttattcattatctttattctgcatgtcttaaccttgttatcttgtgacattctaattgttatcatgttaccaacccctacatctaaagcagaactttagtctatgtactttcaattagatatatactccagtggaaattaaaaatggactaaaatttctttgagcttgtttttgtgaactatgcataagaaaccatccatttgtttgtcaaagtggttgattatactctatgtttctctattcagcttgttagtgctgaattattctcacatgccttatgtattatttctatttatttcagatgtgtggcaatggagtccgttgctttgcccggtttatagctgagcttgaaaacctacagggaacacataggtaatgtactactcaatatcctttagtaggattacaagaatagtgaacttcaaactatcattgaaaatgcttaaaaaatacctattatcatgatattaatcttaaagtacttcatgattggattgcaacctgttctttgccaacgccaatagaattatgatatggatgaaccattctttgtaatggagctgaagttacattcttgcatttcagcttcaaaattcacactggcgctgggctaatcattcctgaaatacaaaatgatggcaaggtaaatgccttttagttttttagttattgtttacttttaagcatgataatgccttttgaatttgaaggtataaaccactgtagtttgccattcacctccctcaatcgattttatttatatatctgccattatatggtttttgtttcttggtctgtataacctgcctgggcttgtatgcttcttgcaatttactagcaacatgatactttataccattatgaaggactcgcacaattgttcatagattcatttaaatacagaaaaacctcatgaagtcatacagtttacatttctgtacttctagttgccattttgttcttatgacttcaacttatatttcagtaagtatgccataacaactttcttaagtcatatggcaagcatgtcgtactgatggtttcagtctagcatactgttctagctcttgcaattttattggatgtgttaaaaggaaatatgttggcctgagctttcttagctccagtagtcttgataatacacctatcctgtcaagcgtaagccattaattgactgattcattcttgttgaatgtgattcccaaaaagtatgaaattattttattgatagatccacttgcatttatcttgttcacaggtaaaggttgatatgggccagcccattctctctggaccagatattccaacaaaactgccatccaccaagaatgaagccgttgtccaagctgatttggcagttgatggctcaacatggcaagtaacctgtgttagcatgggcaatccacattgtgtcacatttggcacaaaggagctcaaggtaattgacttgcaagttcatattctcgtagttttaaattacattctgtcaaaaccgttaatatgcctaaatatttcctatacaaatatgttaaattgttgcctattgattcatgtggatcttgcaattattcatttatggggatatcatggcttattaaaacatttcaatattttttatgtttccatacaggagtgcttgcttaggcccaaggtctacagtctagaactccagatcaatttaacgtgttttaatcctattatcttttgtttagtttttagttaaattaactgctgatcctaccagttggctttgtgatccacttgttcattaccacaagatttgctaatattgttgctttcacttccaataaatgtttgcactttctatgttatatacttcatgcaagcttgagaaatgtctctagatgcttcaatacgtgattgcctctgtttattggcccatatgttctgatatagccaacaagatccccctagcaaccataaatatttttttctgctagtgattaggttcctgtgttgtttgaactgtatatatcctagcctatccaggtccaggctgtccatataataatttattgttgtcttggctggaaaaacaggttttgcatgttgatgatttaaagcttagtgatattgggcctaaattcgagcatcatgaaatgtttcctgcccgcaccaacacaggttactcttaattattatagaaccgtatgccttctattcatacatattcttgcatttgagtttacttaaattaattttcttctgcagaatttgtagaggtcctgtctcgctcacacctcaaaatgagagtctgggagcgtggtgctggtaactgatgttcccttaatcttgatttttataggatatatgcactgtggtttaatttcagcatgttcctttttttttcatgcatatatctttgtctgttaggaatgttgcatgtcatatagtcatagcatcataggtgttgctgtgtcattagcaccacaacattagtgcattctgtaaataactgtagtgtatgtatgtgattcagtggtatctccttttatattctgaggtatacaatatatgattttgactgtaggtgcgacgcttgcttgtggaaccggtgcttgtgcagtagttgttgcagctgtcctcgagggtcgagctgaacgggtttgtcctttcaactgtttgtactttgcactgtcaatttcatctctattgtaccttatatccttatctgtagttggccacattttgttgggatacagaaatgtgtagttgatttgcctggtggaccattggaaatcgaatggagggaggatgacaatcatatttacatgactggtcctgcagaggctgtcttctatggatctgctgttcactaggtcagcttgtttctttaaatagaaagctatctcaatttgtcagtagctgctttgtgatatattatttttgttataagtgcattgttgaaatcattataacattgatattatctacctgtgtaaaagggtaaagtatgatccatagttctcataagacctgaatggcaagagcgtattggtttaacttatgagcttgttcctatcttatgttcatggctgttgataaaatagaattgcatgtccttttttttgttttacttggttagttagtgtttgcagaaatcgtaaccctggaacataactaggaggtataattaccaacaaaaataaatgaaaggggaagtcatatatgacatatactgagcagtcacggtgtgaagaatttcaagcctaaccttcattaggatatacgcttaccaactaaataaagattcacatcaaagattatgtaagttgaatcattctaattattgtgtttatcagtttatagaaatactgggttgatccaatctagattgacagagggaacaaagatagatcagctgttagtaaattatattgagtaagaagataaaatactagatattacttgttttccatagttaattatgtggttaggagaatgttgtcttgtttgatccctgatatcttacatttctgagtggatctcatataaatagttttcttttcatgcaagttgtaagcatgctgtattgcatgtccactgtatagcacagtttttaattggagaaaactgatagttacagtgacacgtgcaattatatttagaactatgatggtcatagtttttagttagccaagtaaaatgattttattttgtaaaaaaacattttttagactatgaaggtgttgcaccattttgtcattaacagattaacatatcaatgcatgtagatgcttaccaaacattttttttaggtaccagggaccaagctggaaaagtttaccgcaactgggagcctgagagattgagtataaggtctatcaaattggtgttttggtaccagcacaacccctcttgattcttaattgcgcctgtggcctgcttactatgggcagaattacggggttctttcaaacaaatctactattttaaatcttttctgcttctttagtttgtcaggtttgaaccctatattggtagtaaatctctcctactttttttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0567200, RefSeq:Os12g0567200