BGIOSGA007454

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Revision as of 02:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007454| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007454, complete gene.| tag = OS07G02...")
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Gene Name

BGIOSGA007454

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007454, complete gene.

LocusTag

OS07G0212400

Ensembl Transcript ID

BGIOSGA007454-TA

Ensembl Protein ID

BGIOSGA007454-PA

Length

4387

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1651618..1656004

Sequence Coding Region

1651618..1651879,1651986..1652254,1652351..1652554,1652664..1652756,1652850..1652945
,1653029..1653373,1653464..1653532,1653625..1653708,1653796..1653861
,1654076..1654141,1654275..1654340,1654438..1654503,1654621..1654668
,1654747..1654809,1654895..1654960,1655123..1655182,1655292..1655357
,1655527..1655574,1655657..1655860,1655984..1656004

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1651618..1656004 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1651618..1656004 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAGGAGTAGAAAAAGGCGTATTGTTCAGAGCAATGAGGAATATTTGTCAGAGGAACAGACTGAAGAAGAAAATACCCTTCCACAGCTTGCCACACCATCTGAACAAAAAACTGTATGTGATGATTCTGGAGAAGGCAATGAAGACACTGATGACGATTTTAATATCAATGATGGAGAAGGCAATGAAGACACTAATGACGATGTTGATATTGATGATGAAGGCAATGAAGATACTGATGTTGATATTAATGTTCGAGTTGAAAATGGAGCACCTGAAACACGTGGCAAGACAAAACTGAAAGATGTTTGGAACCTTCCGAAAGGGCTTAGAATTGTGGTACAATGCAATGATCTCAATCAGGCGGTAGGGGAAGAAGATGGAATTTTGGGTAAATTTCTTGGAATGATATCTAGGAATGGTAGTCTGTGTAGCTTAGGCTACACAGACTGGAGATATGTAATAGGAAAGAGAGAGAAAAATACAAATGAACTAAAAGTTAAAAAGGACATACTTAAGCAAGTAAAGATGAGATTCCTTTATGCTCCTCGGATGGAAGAGTTCATATTAAAAAAAATTGGAGAAAGATGGCGGCAATATAAAGCAAAACTAAAAGATTTGTATTTTGATGTGAATGAGACTAAGGAAGCTAATTGCAACAATGTCCCAGAAGGTGTGCTTTCTGACCAGTGGATTGCTCTTGTCAATCATTGGATGAACGAGAAATCGAAGAGAATAAGTGAGCAGAATAAGAAAAACTGCCAAAAGAAGAAGGCAATTCACACAGCAGGGACAAAGAGTTTTGCTCGCACAAGAGAAGAGATGAGACAAAAAGATCCTGCAAAGAAGAACCCACATAGAGCTGTTGTTTATGTCCACACACACAAGCGCAAAAGTGACAAGAATATAAATGGGCATGTGGATAATTTGAAGAGACTTATAGCTGAACAACCAGCTTTAGCGGATGCTAGTAAAGGAAAGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTAGGAGATGACAAGCCTGGGCGTGTGCATGGTCTTGGACTAGTTCCAAAGGCTAAACAAGTGCTTGATGTGCCAACTTCCCGACGTTTGCAGAATATAAATCTTACTACAGTGGAGGATAACTCCAGTGAAGATGTAATGGCTATTAGACTGCAGATGGAAAAGTTAGAACGCCATGTTGAGAATAATGATGCTGAACTTTTACAATTAAAAGAGAAGGCAACCAAGTTGGAAAAGGCACAAAAGAATCAGGGAGGTTTAGATGGAGCATCTACAAATAAAAAAGCTATTTGTGATGACGTACCTAATTCAAAAAGGAGGAGAGTGTATGGTGACAACCCCTCGCAAGAAATTTGTATGTTTGAGGAGGGAAACATTATGGATCAGCAGGACAACAGTTTGATGAATACACAAAGCCATGTGCACGATGAGAATTTGCAACCACCAACCAAGCATTCTACTGTTTACAAGCGCAAAGGAAATTTGGACCATAATGAGCTTATGCAACCAGGGAAGAGTATTTCTAGTGCATACAAGAACAATAAACCTGACAACCAGGACAACTATATGGTGAATGCACACAAAGTTACAAGTACACACAAGAACAAAGAGAACCTTACCCGCAAGCTTGTTAGACCAAGCCTAAACAAGTATAGTACTGCTTCTAAGAAACGGCAATGCAACACAATAGACTTTTTAACTGACAATTCAACAGTGAAAGTGTATGGTGACGGTCCCTTGCAAGAAATTTGTCATGTTGAACAGGAAAACATTGTGATGAATTCACAAAGCCATGCTCAAGATGAGGATAAGACACCACCAACCAAGCATGCTACTGCACACAAGAACAAACGAACCTTTGGCCTAAATGACCATGGGAAACAGATGGAGATTATTTGTGCCAAGAACAAGAAACCTGACAATCAGGACAGCCATATGGTACATGCACATAAAGTTGGTGGTGCATACAAGAAACAACAGTGCAGCAAAATGGACTTTATCACTGACAATTCAATGGAGGTTGGAACTAAAGTATTCTTAAAAAGTTGGAAAAATCGGAATACAAACGTGGCTCTTGCCACTATTGTAAGCTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGATTAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTTGACAAGATAAATGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MARSRKRRIVQSNEEYLSEEQTEEENTLPQLATPSEQKTVCDDSGEGNEDTDDDFNINDGEGNEDTNDDVDIDDEGNEDTDVDINVRVENGAPETRGKTKLKDVWNLPKGLRIVVQCNDLNQAVGEEDGILGKFLGMISRNGSLCSLGYTDWRYVIGKREKNTNELKVKKDILKQVKMRFLYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKDPAKKNPHRAVVYVHTHKRKSDKNINGHVDNLKRLIAEQPALADASKGKTAWKGDALNQILGDDKPGRVHGLGLVPKAKQVLDVPTSRRLQNINLTTVEDNSSEDVMAIRLQMEKLERHVENNDAELLQLKEKATKLEKAQKNQGGLDGASTNKKAICDDVPNSKRRRVYGDNPSQEICMFEEGNIMDQQDNSLMNTQSHVHDENLQPPTKHSTVYKRKGNLDHNELMQPGKSISSAYKNNKPDNQDNYMVNAHKVTSTHKNKENLTRKLVRPSLNKYSTASKKRQCNTIDFLTDNSTVKVYGDGPLQEICHVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKNKKPDNQDSHMVHAHKVGGAYKKQQCSKMDFITDNSMEVGTKVFLKSWKNRNTNVALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVDKING</aaseq>

Gene Sequence

<dnaseqindica>1..262#369..637#734..937#1047..1139#1233..1328#1412..1756#1847..1915#2008..2091#2179..2244#2459..2524#2658..2723#2821..2886#3004..3051#3130..3192#3278..3343#3506..3565#3675..3740#3910..3957#4040..4243#4367..4387#ATGGCAAGGAGTAGAAAAAGGCGTATTGTTCAGAGCAATGAGGAATATTTGTCAGAGGAACAGACTGAAGAAGAAAATACCCTTCCACAGCTTGCCACACCATCTGAACAAAAAACTGTATGTGATGATTCTGGAGAAGGCAATGAAGACACTGATGACGATTTTAATATCAATGATGGAGAAGGCAATGAAGACACTAATGACGATGTTGATATTGATGATGAAGGCAATGAAGATACTGATGTTGATATTAATGTTCGAGGTAACTGCTAAGTTTAATAGTCCTAATGGTAACAAATAATGACATTATTACTCGTATCCCTGATTACTAAGGATCACTTTTGTCTTCGCAATTTAACACCGAACAGTTGAAAATGGAGCACCTGAAACACGTGGCAAGACAAAACTGAAAGATGTTTGGAACCTTCCGAAAGGGCTTAGAATTGTGGTACAATGCAATGATCTCAATCAGGCGGTAGGGGAAGAAGATGGAATTTTGGGTAAATTTCTTGGAATGATATCTAGGAATGGTAGTCTGTGTAGCTTAGGCTACACAGACTGGAGATATGTAATAGGAAAGAGAGAGAAAAATACAAATGAACTAAAAGTTAAAAAGGACATACTTAAGCAAGTAAAGGTAATTCCTTTTCAGATCAACATTTTTGCTAACTTCTTGTATTATGTTATGCATATCCCCATATGGCCATATGAGTTTCTGTGTTGCTATATGTAGATGAGATTCCTTTATGCTCCTCGGATGGAAGAGTTCATATTAAAAAAAATTGGAGAAAGATGGCGGCAATATAAAGCAAAACTAAAAGATTTGTATTTTGATGTGAATGAGACTAAGGAAGCTAATTGCAACAATGTCCCAGAAGGTGTGCTTTCTGACCAGTGGATTGCTCTTGTCAATCATTGGATGAACGAGAAATCGAAGGTACATATACCATATTCATTTCTGTAATGGTCTTACAAATTAGAACTCTGTACTAAACAAAACAATGCAATATTCTTTTTTGATTGCTAACTCTACGAGACCATAACAGAGAATAAGTGAGCAGAATAAGAAAAACTGCCAAAAGAAGAAGGCAATTCACACAGCAGGGACAAAGAGTTTTGCTCGCACAAGAGAAGAGATGGTAAAACATGTCTTGAATAGTATTCATCTATTTCCATTTCAAGCATGTATAGCTACTATTAGGACTTTACTGATTTGGTCATGTGTTCCATAGAGACAAAAAGATCCTGCAAAGAAGAACCCACATAGAGCTGTTGTTTATGTCCACACACACAAGCGCAAAAGTGACAAGAATATAAATGGGCATGTGGTATACTATTAACACTCAACCATAGATATTTTTCAGTTATTCTCATATGTTGTTTTATTCGTATTAATTTTTCATATGTTTAGGATAATTTGAAGAGACTTATAGCTGAACAACCAGCTTTAGCGGATGCTAGTAAAGGAAAGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTAGGAGATGACAAGCCTGGGCGTGTGCATGGTCTTGGACTAGTTCCAAAGGCTAAACAAGTGCTTGATGTGCCAACTTCCCGACGTTTGCAGAATATAAATCTTACTACAGTGGAGGATAACTCCAGTGAAGATGTAATGGCTATTAGACTGCAGATGGAAAAGTTAGAACGCCATGTTGAGAATAATGATGCTGAACTTTTACAATTAAAAGAGAAGGCAACCAAGTTGGAAAAGGCACAAAAGAATCAGGTGAATTTAAGGGAGTTGAGTCTTAAAAAAATTATATGAACTTGTGTGTGACCCAATGAATGCATCTAACTTACCTAATTGAAGTTACAGGGAGGTTTAGATGGAGCATCTACAAATAAAAAAGCTATTTGTGATGACGTACCTAATTCAAAAAGGAGGGTATGTATCTTTATGGAAGAAATATCATAACATTTTCTGCATTATCTCATAAACTGTGGTATAGATCTCTGTTCATTTTCTGTTATGGACAGAGAGTGTATGGTGACAACCCCTCGCAAGAAATTTGTATGTTTGAGGAGGGAAACATTATGGATCAGCAGGACAACAGTTTGATGGTAATGTGATATAGCACCATCTTATAACTGGGAATAGCTGTGTTTTTTTACTTGGGAATAGCATTTATTTTCTCTCTTTTACAATAGAATACACAAAGCCATGTGCACGATGAGAATTTGCAACCACCAACCAAGCATTCTACTGTTTACAAGGTCCTTGCCTTTGCATTTAAAATATTATTATATATATATTCACTATTATTTACATAGCATTCATTATAATCATATGCCTTCTTTTACTCTAGAATACACAGTCTTTGGGCCAGAATCACAGTGGGAAGCAAAGGAAGATTACTTCCTGTGCAAACATAAACAAATAATTGGAACATTATAGTTTGTGCCAATTTTATGACCTATTCCATTGCAGCGCAAAGGAAATTTGGACCATAATGAGCTTATGCAACCAGGGAAGAGTATTTCTAGTGCATACAAGGTGAGTTGATTAAGTTCTCTCTTTATCCTTTCAAACTCAATGCCATAGTCAATAAGTGTTTGAAAGTAGTTTAATTTCGATATATAAATGTATATATAGATTTGTAAAATTTATTTGTTACCTTCCACTGTAGAACAATAAACCTGACAACCAGGACAACTATATGGTGAATGCACACAAAGTTACAAGTACACACAAGGTTATTTTTTCATCACTTTAAGTCACCATGTCTACAGATATAAGCTCTTTGAAACTATAACACACATGATTTACTAGTTATAATAATTGTATTGCAGAACAAAGAGAACCTTACCCGCAAGCTTGTTAGACCAAGCCTAAACAAGTATAGTACTGCTTCTAAGGTTAGTCTAATTGTTTCAAGTTCAAAATGCTATTTCTGTTTATTGAACACTACACAACAACTAAAATAGCACACACAGCATGTTGGTTTTTACTGTAAATTCTCTCTATTTTTTCAGAAACGGCAATGCAACACAATAGACTTTTTAACTGACAATTCAACAGTGGTAAACCTTGCTAACATTTTAGTCTAAATAGTTTAATAAAATCTGGTCTTAATGTCCTTTTATTTTCCACTGTGATAGAAAGTGTATGGTGACGGTCCCTTGCAAGAAATTTGTCATGTTGAACAGGAAAACATTGTGATGGTAATATACATAAATTTCATTGTTTTATACATGGGAATAGTTGCACTATTTTGTAACTGGGAATATATGCTCTCTTTGACAACAGAATTCACAAAGCCATGCTCAAGATGAGGATAAGACACCACCAACCAAGCATGCTACTGCACACAAGGTCCTTGTCTTTCAATTTATATTTTTATTCTGAACTCACCATGGTTGCATCCTATTATATGGTTATCATGGATACATAGCATTATATTATTTGGTATTGTTTGTAACTAACTATGAATGTTTACTATAGTTCATGACAATGTGATGTATTCTTTTATTCTAGAACAAACGAACCTTTGGCCTAAATGACCATGGGAAACAGATGGAGATTATTTGTGCCAAGGTTAGTTTTCACTTCTTATTGAGTTCAAAAATTATTTGATAGAAAAGTTTGAAAGTAAAATTTCTTAATATATATAATTTTAGCACTAATTTGTTGCCCTCCCCTATAGAACAAGAAACCTGACAATCAGGACAGCCATATGGTACATGCACATAAAGTTGGTGGTGCATACAAGGTTGTTTTTTTATTCACCATGTTTACAAATATCAGTCCATTCAAACTATAACATGCATGATTCACTAGTATTATGATTGAATTGGAGAACAATAATTGGCTCTGTTTGGTCTTTCTTTCTTTCTATCTTGTGGTTAAATTGCAAACCATGATCCAATTTTTTTTTATAGAAACAACAGTGCAGCAAAATGGACTTTATCACTGACAATTCAATGGAGGTATTTTACTGTGAAATTATTTATGATACTTGAATTTCTTAAAGTATATTGATAATATTGATGGATGTATTATGCACTTCAGGTTGGAACTAAAGTATTCTTAAAAAGTTGGAAAAATCGGAATACAAACGTGGCTCTTGCCACTATTGTAAGCTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGATTAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTAGGACTTGAAATTGCGTGGCCTGCAATTTTTATATGTTCCTATCTCTTACTTCTTACTTCGGAGATGTGCTTTTCGTCTTCATAATGGTATATTAATGCTTATATATTTTTTCTATTATAGGTTGACAAGATAAATGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007454