BGIOSGA007462

From RiceWiki
Revision as of 02:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007462, complete gene.| tag = OJ1007_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007462, complete gene.

LocusTag

OJ1007_D04.9

Ensembl Transcript ID

BGIOSGA007462-TA

Ensembl Protein ID

BGIOSGA007462-PA

Length

3751

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1780376..1784126

Sequence Coding Region

1780376..1780818,1781941..1781974,1782111..1782299,1783276..1783365,1783456..1783521
,1783619..1783710,1783821..1783868,1784000..1784126

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1780376..1784126 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1780376..1784126 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCCACGGCTCGCCGGCGGCGGTGGCGGCGTCGGCGGCGGTGGCGGAGATGAGGTTCACGACGGGGGGGTCGTCGACGCGGTCGTGGGAGCCGACGGTGACGGCGGACACGTCGGACCTGCACTACTGGATGCAGTGGCGCGCCGCGGTGTGCGCGCTGTCCGTGCTCGCGTGCATGGCCGTCGCGGCGTGCCTCGTGTGGCGCCACGAGGGCCCCGGCGCCGAACGCCGCCCCGGCGGCGCGTCCGGCGGCGGCGGCGGGAGCAAGGAGCGGCGGCGGCCGGGGGTGCTGTACGACGACGAGGCGTGGCGGCCATGCCTCCGGGACATCCACCCGGCGTGGCTGCTCGGCTACAGGCTCATCTCCTTCTTCGTCCTCCTCAGCTTGCTCATCGTCATTGTCATCTCCGATGGTGGCACCATCTTCTACTACTACACTCAGTGGACCTTCATTCTGGTGACGATTTACTTCGGGCTCGGCACGGCGTTGTCCATCTATGGATGCAGCAAGCTTGCTGATGAGAATGTTGTCACTGAAAGAACAGACATGGAGCTCGGCTCGTACGTCGCCCATGGAGCTGGTACTAAACCCAATTTGAATGGGGAAGATGACACAGGAGAGATTGCTGGATTCTGGGGTTACCTGCTCCAGATCATCTACCAGACAAATGCAGGCGCAGTGATGCTTACAGATTGTGTGTTTTGGTTCATCATCTTCCCATTCCTTACAGTCAAAGATTACAATCTAAATTTTTTGTTGATAGGAATGCACTCGGTAAATGCCGTTTTCTTGCTTGGTGAAGCTGCCCTGAATAGCTTGAGCTTCCCTTGGTTCCGGGTCGCATATTTCTTTCTCTGGACTGCTCTCTATGTCATTTTTCAATGGATTCTCCATGCATCAACTCCACTTTGGTGGCCATACCCATTTCTCGATGTTTCAGCTAATTTATCTCCTTTGTGGTACTTCGCCGTCGCGATCATGCAATTACCATGCTACGCGGTATTCAGACTGGTGATCAAACTGAAACACCACCTGCTCACAAGGTGGTTTCCGGGTTCAGTCGTAAGAGGCTCATCTACACCATAA</cdnaseq>

Protein Sequence

<aaseq>MFHGSPAAVAASAAVAEMRFTTGGSSTRSWEPTVTADTSDLHYWMQWRAAVCALSVLACMAVAACLVWRHEGPGAERRPGGASGGGGGSKERRRPGVLYDDEAWRPCLRDIHPAWLLGYRLISFFVLLSLLIVIVISDGGTIFYYYTQWTFILVTIYFGLGTALSIYGCSKLADENVVTERTDMELGSYVAHGAGTKPNLNGEDDTGEIAGFWGYLLQIIYQTNAGAVMLTDCVFWFIIFPFLTVKDYNLNFLLIGMHSVNAVFLLGEAALNSLSFPWFRVAYFFLWTALYVIFQWILHASTPLWWPYPFLDVSANLSPLWYFAVAIMQLPCYAVFRLVIKLKHHLLTRWFPGSVVRGSSTP</aaseq>

Gene Sequence

<dnaseqindica>1..443#1566..1599#1736..1924#2901..2990#3081..3146#3244..3335#3446..3493#3625..3751#ATGTTCCACGGCTCGCCGGCGGCGGTGGCGGCGTCGGCGGCGGTGGCGGAGATGAGGTTCACGACGGGGGGGTCGTCGACGCGGTCGTGGGAGCCGACGGTGACGGCGGACACGTCGGACCTGCACTACTGGATGCAGTGGCGCGCCGCGGTGTGCGCGCTGTCCGTGCTCGCGTGCATGGCCGTCGCGGCGTGCCTCGTGTGGCGCCACGAGGGCCCCGGCGCCGAACGCCGCCCCGGCGGCGCGTCCGGCGGCGGCGGCGGGAGCAAGGAGCGGCGGCGGCCGGGGGTGCTGTACGACGACGAGGCGTGGCGGCCATGCCTCCGGGACATCCACCCGGCGTGGCTGCTCGGCTACAGGCTCATCTCCTTCTTCGTCCTCCTCAGCTTGCTCATCGTCATTGTCATCTCCGATGGTGGCACCATCTTCTACTACTACACTCAGTAAGCCACTCCATTTCATTTTCTCAGCTACTACTTTTTTTTTACCTCTTCATTAATTATCTGTTCCTTTCCCCCAAAAAAAACATGTCATTTTAACTTGGAACTTTGGAAGATGGTGTTCTTGATGCAAAGTTTAACTTCCTCCTTATCTGTTTTCCCCCATATAACTTGGATGGTGTTCAGGATGCAAAGTTTGGTGATAAGATTTTTTTTAAAAGAAAAAAAAAAGCAAGGAAATGAGATTGATTAAAATTTTCATTGTGTGCTCAAGTGCTTCAACTAGGAGGAATGTACTGTGGTCAAGAAGTTTGGCATTTGTTCCCCTTTGGTGTAATTTAGATTTTTCAGGGAATAAAGGGTGCTTTTCCATGAAGCAATTGGTTTTCTGAACATGCATATAAAGAATTAATGAAAACTGTCAGGCAGAATTCCTGGCATTTTCTGTTAAAAATACTATGCACAATTGATGGCTAAAAACGGTTTGCCTGTTAGCTTAGACAGCAAGCGACGCGCCTCACCATTTTGGTTCTATTGTTCATGGTCATGGGTAGTACCAAGATTTGTACTAGCACATCTCTGAAACTGTTTTTATATGTGACACATTACCTCAATTTAATAATTACAAAGGACCTCACATGTTATTTGGAGCGCATTTAAAAATGCAGTCTTTTGTGCAGTATGGAATACAGTGTCATAACTGTTCATACTCAGTTTATTAACTACCAGTCTACCAGCTAGAAGTACTGAAATTCGGCATTACTACCTGTATGGTCAGTAGTTTTTATTAATGTTTTTGATTAATGGAATGGACAACACTAGGAATACCCACTCCAACTTAGCTACCTGGTCTTACATGACTTCCTGTTCCATTAAACATTTCTCACATCAAGTTAATCAAATACTGCCTTTTGATAATATATTATAATATATGACCTTTTTGTTGCAAAATTCTGGTGTTTATCATATTTCTCAATAAACAAACTAGTGTATCTGGTTGCAAGAATCAAATTATCGTTACATGGATCCGCTAGTTGTTGGTGTTTGTCACCCTGCTCCCAGAAGTAGCATTTGTCACCAGCCTTCCTCCTCTAATAAGTGGTTGTTGAACTGTCGATAATGCAGGTGGACCTTCATTCTGGTGACGATTTACTTCGGGGTAGGTCCCTTAATCCCTCCTTTTTCACAACAAAATAGTTTGTCTCTGCACTGAATTCATGAATCTAATGATTCATGTCGATTTATCTTTACATCGAACACATCTGAAGAAAAGTTTGTTTTGTGGAATTGTTCAGCTCGGCACGGCGTTGTCCATCTATGGATGCAGCAAGCTTGCTGATGAGAATGTTGTCACTGAAAGAACAGACATGGAGCTCGGCTCGTACGTCGCCCATGGAGCTGGTACTAAACCCAATTTGAATGGGGAAGATGACACAGGAGAGATTGCTGGATTCTGGGGTTACCTGCTCCAGATCATCTACCAGGTAAAGAGGGATTCCATGCAGCCAAAGAACTTAGAATAACCATCCACTTGAGCGCCTTTTTTTTTCTTATTTGTTATTGAAGAGAGTTATCTTATCTGCACTGACATTTGCGTCCATGGAGAGGGGGTCTGATCTCATTAGGCTTTTCATACGCAATTATTGCACTAACAACTAAAGTACGTTTGTGGTGTGCTCTGATGAATTGGATTCCGTTTCTAAAGATCAGATGTGCCCACATACTAGCATCTTTGTCCGGTCACATTTCAAGGGCTCTCACGTAGCCGCCCTACATGAGCCATCTTGACATCTTGTTGGTCCTATCTAAATATTCAGATAATCTCTGCAAATCTCACATTTCCTTGTACCTCAAGGGCTGAATCAGCTTTAAACCGCTTTGCGAAATGTAGGGCTGACTCTTTTTAGTAGTGGCATCAAGAATAAAGACAACATGTTTCCTTTGTGTTGATTTGCAAGGCCTAACTGTACCCAAACGGTGACTGAATACCTTCCTAGGCTGAAATAGGACAGAATGGAACTATTGTTCTGCTTTGTGATAAGAATTACTAGATAGTTCTATGGATGGTAGTTTACTAGCGCCATGTTTAGTTCCAAAGTTATTCTTCAAACTTTCAACTTTTTCATCGCATCAAAACTTTCCTACACACACAAACTTCCAACTTTTCCGTCACATCATTTCAATTTCAACCAAACTTCCAATTTTGGTGTGAACTAAACACAACCTAGATCTGTGTTGGGTTACTGTGTACACTTTGCCAACAAAATTTTGTAATATATCTCACCTTTTTTAGAGAAAAGAATGGGTATATTCATTAATTCATAATCGTTGTGAATATCCTTTTAAGGATTTATGCTCTTATTATCAAACTTTACAGAAAACTGAGTAATTTATGTAAGTTTTACAGTTTACTAGCAATTTTTACTGAACCAGTATCTGACCTTTTATCTGCCATGACAGACAAATGCAGGCGCAGTGATGCTTACAGATTGTGTGTTTTGGTTCATCATCTTCCCATTCCTTACAGTCAAAGATTACAATCTAAATTTTGTAAGTATTACATGCTTCAGGCCTTCCCTACCTGCCATCTCATACTTTGACCAATACAGTGCTAAAAATTCAGTTACTATGTTTCGACAGTTGTTGATAGGAATGCACTCGGTAAATGCCGTTTTCTTGCTTGGTGAAGCTGCCCTGAATAGCTTGGTAAGTTGATAACTACTTATCTCGATCAGTCAAGTAATTTTATGAATGAATGAATGGTTAATTTGACAATTACCCACTGAATTCAACATATCTGCAGAGCTTCCCTTGGTTCCGGGTCGCATATTTCTTTCTCTGGACTGCTCTCTATGTCATTTTTCAATGGATTCTCCATGCATCAACTCCACTTTGGTAACTTTTTTTTTCTAACTCCCATTCTCTCCTAACTACTAAAACCATGACTAAGAGTAGTACTTGCATCTTTCTGTTACTGATCACTACATTTCATATCTATTTGTCAGGTGGCCATACCCATTTCTCGATGTTTCAGCTAATTTATCTCCTTTGTGGTAATTCCATTACCTCCCTACAATGATACTTCCTCCCATATGTCTTCTCTTGCAAAGATTACAAACTGAAATCATCATGAATATCACAACTCAAATCATCAGATTTTCAATGAATCTTTTCATCTACACAGGTACTTCGCCGTCGCGATCATGCAATTACCATGCTACGCGGTATTCAGACTGGTGATCAAACTGAAACACCACCTGCTCACAAGGTGGTTTCCGGGTTCAGTCGTAAGAGGCTCATCTACACCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007462