Os12g0567500

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0567500| Description = Protein kinase-like domain containing protein| Version = NM_001190084.1 GI:297729298 GeneID:9271876| Length = 6663 b...")
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Gene Name

Os12g0567500

Description

Protein kinase-like domain containing protein

Version

NM_001190084.1 GI:297729298 GeneID:9271876

Length

6663 bp

Definition

Oryza sativa Japonica Group Os12g0567500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23541890..23548552

Sequence Coding Region

23541890..23542602,23542709..23542777,23543043..23543169,23543251..23543486,23543573..23543742
,23543919..23543999,23544077..23544148,23544337..23544408,23544514..23544652
,23545205..23545707,23546881..23547074,23548016..23548552

Expression

GEO Profiles:Os12g0567500

Genome Context

<gbrowseImage1> name=NC_008405:23541890..23548552 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23541890..23548552 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaagccgccgcagcagttcaccggcggtggcggcggcggctgctgccgaagctgatgctactcctgtgcgccgtcgtccatggccagcagccggacagcctcggcttcatcagcatcgactgcggcatccccgacggcggcggctactccgacgagtccacccgcggcctccgctacgtccccgacgccggcttcctcgacgccggcgcgggcctcagcgccggcatcaacccgccctacaccgaccgcgacctcgccgcccgctacctcaccgtccgctacttccccggcgccgcctccgccgccggcgagcggggcggctgctacacgctccggcagctctcgccgggagggaggtacctcgtgagggccaccttctactacggcaactacgacggcgccatcgccatgctccccgtcgtcttcgacctccacctcggcgccaaccggtggaccgccgtcaacgtcaccgccgccgacgccatctacatcttcgaggccgtcgtgtcgccgccggcggacttcctccaggtgtgcctcgtgaacatagggaagggaacgccgttcatctccgggctggacctgaggccgctgaaaccggagctgtatccggaggcgacggcgaaccagtcgctgcttctgctcaaccacgaccgcccgccggcgaggttcgccttcaaccgctaccagttctggcgcccggcgagctactacaaactattcaggtacccattcgatccgtacgaccggctgtggcagccgtacggcgacgacccgtcgtggacgaacatcaccgtcgccgccgccgtcgacgtcaccaacatcagccgctccgacgacccctccccgatcctccgcagcgccgccacgccggcgaacgccaccgtccgccgcctcgacttcccctggagctccgacgacgccgccaccaccacctacctcctgctgctctacttcgccgagctgcagcggctgccggccggcgcagcgcggcggttcgacgtcctcgtcgatggcgacgcctccgccggcggcgggcggcgagggtacacgccccggtacctcgcggcggaggtcgtgaggtcgacggtgcgggcggcgcggccggggcagcggcacgtcgtgtcgctcgtcgccgcgccggactccgcgctgccgcccatcgtcaacgggctcgagatctactcggtgcagccgatgcctgaactcgcgacgaacgacagagacgcgaaggcgatgatggaaattcgcgataactatgaactgaagaagaattggatgggggatccatgtgctccaaaggcatttgcctgggttggattgaactgtggttattcttcatctgatcctgcattggtaacagctttgaatttgtcatcaagcgtgttgattggtccagttaatctttcttttggtgatctgaagtccctgcaatacttggatttgtccaataacagcttatctggcccaatacctgattttctagtgcaaatgccagcactcaagttccttgatttgtcaagcaataaactcagtggatcgattccttctgacttacttcaaaagagagaaaatggatcacttgtattaaggattggcaacaatgcaaatctctgctataatggggctaataatacctgtgctccggagagtaagcaaagcaagagaatccttgtgattgcaatagctgttccaatagttgcagcaactctgctgtttgtggcagcaaaatttatccttcacaggaggaggaataaacaagatacctggatcacaaacaatgcaagacttattagccctcacgaaaggtcgaacgtattcgagaaccggcaattcacctacagggaattgaaactcatgacatcaaacttcaaagaggaaatagggaaaggaggattcggcactgtcttcctaggatatttggaggatggaactccagttgctgtcaagatgtgctcaaaaacatcttctgaaggggataaaaagtttttagctgaggctcagcacctgactagagttcatcacagaaaccttgtttccttgattggatattgcaaggataagaaacatctggcacttgtttatgagtacatgcaaggaggaaacctggaggatcgtttaagaggagaggcctccattgctgcaccactcacctggcatcaacgtctgaagatcgctctcgactctgctcaaggattggagtacctgcacaagtcatgccagcctccattgatccacagggacgtcaagactcgcaacatcctcctctccggcgacctcgacgccaagatcgccgacttcggcctgaccaaggtgttcgccggcgacgtcgtgacccacgtcaccacgcagccggccggcacgctgggctacctcgacccggagtactaccacacctcgcgcctcagcgagaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcgtcaccggccgcccaccggccgtccccctcggcgacggcgacggcggcggcggcgagagcgtccacctcgccgtgtgggcgaggcagcggctggccgagggcgacatcgagagcgtcgcggacgcggccatgggaggctgcttcgaggtgaactcggcgtggaaggtggcggagctggcgctgcggtgcaaggagcggccgtcgcgggagcggccggccatggcggacgtcgtcgccgagctgaaggagtgcctcgagctggaggcgtcacgcgcgctgggacgcggctacagctgctacagcagcggcagcggcggcggcagctcggtggcgacgacgacgacgacgagcggcgccgccaatatcagcgcggcggcgtcggcggcgagtgtcagtgacgcccagatcggcgagctgaggcaggagagcgtgctcgagctgggaccaagatga</cdnaseq>

Protein Sequence

<aaseq>MEEAAAAVHRRWRRRLLPKLMLLLCAVVHGQQPDSLGFISIDCG IPDGGGYSDESTRGLRYVPDAGFLDAGAGLSAGINPPYTDRDLAARYLTVRYFPGAAS AAGERGGCYTLRQLSPGGRYLVRATFYYGNYDGAIAMLPVVFDLHLGANRWTAVNVTA ADAIYIFEAVVSPPADFLQVCLVNIGKGTPFISGLDLRPLKPELYPEATANQSLLLLN HDRPPARFAFNRYQFWRPASYYKLFRYPFDPYDRLWQPYGDDPSWTNITVAAAVDVTN ISRSDDPSPILRSAATPANATVRRLDFPWSSDDAATTTYLLLLYFAELQRLPAGAARR FDVLVDGDASAGGGRRGYTPRYLAAEVVRSTVRAARPGQRHVVSLVAAPDSALPPIVN GLEIYSVQPMPELATNDRDAKAMMEIRDNYELKKNWMGDPCAPKAFAWVGLNCGYSSS DPALVTALNLSSSVLIGPVNLSFGDLKSLQYLDLSNNSLSGPIPDFLVQMPALKFLDL SSNKLSGSIPSDLLQKRENGSLVLRIGNNANLCYNGANNTCAPESKQSKRILVIAIAV PIVAATLLFVAAKFILHRRRNKQDTWITNNARLISPHERSNVFENRQFTYRELKLMTS NFKEEIGKGGFGTVFLGYLEDGTPVAVKMCSKTSSEGDKKFLAEAQHLTRVHHRNLVS LIGYCKDKKHLALVYEYMQGGNLEDRLRGEASIAAPLTWHQRLKIALDSAQGLEYLHK SCQPPLIHRDVKTRNILLSGDLDAKIADFGLTKVFAGDVVTHVTTQPAGTLGYLDPEY YHTSRLSEKSDVYSFGVVLLELVTGRPPAVPLGDGDGGGGESVHLAVWARQRLAEGDI ESVADAAMGGCFEVNSAWKVAELALRCKERPSRERPAMADVVAELKECLELEASRALG RGYSCYSSGSGGGSSVATTTTTSGAANISAAASAASVSDAQIGELRQESVLELGPR</aaseq>

Gene Sequence

<dnaseqindica>5951..6663#5776..5844#5384..5510#5067..5302#4811..4980#4554..4634#4405..4476#4145..4216#3901..4039#2846..3348#1479..1672#1..537#atggaggaagccgccgcagcagttcaccggcggtggcggcggcggctgctgccgaagctgatgctactcctgtgcgccgtcgtccatggccagcagccggacagcctcggcttcatcagcatcgactgcggcatccccgacggcggcggctactccgacgagtccacccgcggcctccgctacgtccccgacgccggcttcctcgacgccggcgcgggcctcagcgccggcatcaacccgccctacaccgaccgcgacctcgccgcccgctacctcaccgtccgctacttccccggcgccgcctccgccgccggcgagcggggcggctgctacacgctccggcagctctcgccgggagggaggtacctcgtgagggccaccttctactacggcaactacgacggcgccatcgccatgctccccgtcgtcttcgacctccacctcggcgccaaccggtggaccgccgtcaacgtcaccgccgccgacgccatctacatcttcgaggccgtcgtgtcgccgccggcggacttcctccaggtatatacgttataaatttggataaattttgttgttcttttttaagaaatgaatttcactttgaggcttttttaacttgaacagtttaccgagcggtttctctgtgtgaaccagcaagaatggctcataagcatgtaatcgagagattatattgtcgatttttaaaacaccggttatcacatctcttagtacaaattctaaaagatataccaggcaccaccagggttcaaaatttcagaaccatttcggccgaattttttaattttttttgtgaacgttagcaatatttgtacaaaatttcagaccaaaattttgccatatcagcaccctccgatacaaataccgaaatcgaaatattgaaccctgggcaccacaatttaacaatgcaggattttattcttcctttcaaatcataattatacataggaaaccaatgttattaattacatataatttatcttgagccaactactcatctcttagaaatgaactagctggtgcatgcagctcaatatagggtctatttgggagagtttcacaattgcaatttctctcagaatcagaagcttcccaaatagtttttttatctaaattttaaaaagttataattatagaatgtagaaaataaattagaagctagaaaattttttaaaaaaactcaatttttccatatccttagaaattgactatcaaccatccgtttgctagagttataatttggtcgtgtctgccgattgctaggctctataattttggaataaaacttttataaacgtgttcttagcggtcaaaaagcaaatgctgaaaaataaacctcgataaaaaaaccccaaaatcaactttaaatttaaggttaaaaatttaaattttggccaatatacataaacataaacgataagcgaaaagatggggctgctagttaatttgcgaatcttctacaggtgtgcctcgtgaacatagggaagggaacgccgttcatctccgggctggacctgaggccgctgaaaccggagctgtatccggaggcgacggcgaaccagtcgctgcttctgctcaaccacgaccgcccgccggcgaggttcgccttcaaccgctaccagttctggcgcccggcgagctactacaaactattcaggtgagatctccatcgacacaacagccactaatactacggttttctgaatgtagtagtttcagaatccatgggttctgtgtcaacttgaacagctgccgactgaggccctctctagtttacataaatttttccaaacaaatgtcgcatcgaatctttagacacatacatagattattaaatatagataaattaaaaaactaatcacacagtttgcatggaaatggcgagacgaatcttttgagcctaattagtccatgattagccataagtgctacagtaacccacatgtgttaatgacggattaattagactcaaaagattcgtctcgcggtttccagtcaagttatgaaattgattttttcatttctgtccgaaaacccatttcgacatgcagtcaaacatccgatgtgacacctaaaaattttcttttcgcaaactaaacgcaccctgaatttcctgtccacgttaatgtcagttatattctaaatcacgataggccgccggcctgagctccctgaaacacgacctgattgacgcatggcatttgaccagcgcaagcaatgttaaacaaagttatcatcttaattaagctgtcgtctgtttgtacacctgtctaagttagtttagcctctctttttttcaactctttcgtaatcttcacaaaatataatcttaaatcgatttttgctaaacatcttgcgacaattttttgcccgaaatctcccatcaaaacttttcaatatatctctattatcagtagttttaaaacaaattaaaaaataaattacaggtaaaaatcaaaatcaactctaaaattaaaatttagctatgctgataaactatgagagacataatacattttcatgccagttactacatatgagggattcagttcagattcattgtattagtatgtgtagtcatgtttaaattccaactttttcatcacatcgaacttttttacacacaaactttctacttttccttcacatcgttccaatttcttcaaattttcaattttggtgtggaactaagcacagccgtagtttatttcatcacacatctcttaatcagttcaaccacacattttactccattaaaattcgaaattttctccatttaatcaaacctaatcattattagcttttcttgcaaaattaataacatcaacaggtacccattcgatccgtacgaccggctgtggcagccgtacggcgacgacccgtcgtggacgaacatcaccgtcgccgccgccgtcgacgtcaccaacatcagccgctccgacgacccctccccgatcctccgcagcgccgccacgccggcgaacgccaccgtccgccgcctcgacttcccctggagctccgacgacgccgccaccaccacctacctcctgctgctctacttcgccgagctgcagcggctgccggccggcgcagcgcggcggttcgacgtcctcgtcgatggcgacgcctccgccggcggcgggcggcgagggtacacgccccggtacctcgcggcggaggtcgtgaggtcgacggtgcgggcggcgcggccggggcagcggcacgtcgtgtcgctcgtcgccgcgccggactccgcgctgccgcccatcgtcaacgggctcgagatctactcggtgcagccgatgcctgaactcgcgacgaacgacagagacggtatgagtttaaccagatttaaattcgtttgaaaaataaaattcgatgaaattcgtttgttttttttttaaaggactacctatatgttgatcttgcgaagcttcgaatctcgcacagttttcaatcaatggatatagcccgtcttaaatgaaataacaaaaaaaatgagctaagcatgtaaaaaattgtaaatatatagcaaataaatttaattttagtgtactgtaactgagtgtaagtgttatgtagccgggtgtgaatacaaattagatttacaagaaatactctcggtgcagccaacgcctgaacaaattcgtttgaatgctcaaaatcttttttcaaaggtttggagagaatgctgttgatcaacttgcatatagatcataacattgtgtatttggtagggtgtacagcatagttgcacatctctgaatcttgatgttttttggcccccaaatattttattcagtttaaaatctcggatttgagttgtttgttagaatgatggtgaggtaaaaagttcagaatctcctttttttttcgtatgaacagcgaaggcgatgatggaaattcgcgataactatgaactgaagaagaattggatgggggatccatgtgctccaaaggcatttgcctgggttggattgaactgtggttattcttcatctgatcctgcattggtaacagctttgtaagtagtcacaaaattgagcattttaacagtgctgttttatcaaatgcagtcgaaaaacttgtagtggtacgaatctacttctaaatgatttttttttcgcaggaatttgtcatcaagcgtgttgattggtccagttaatctttcttttggtgatctgaagtccctgcaatacttgtgagtgcaaaatttggtagttttttttttcaaaaaaaaaaaggttatctgttctcacttcctgaccggaaatatcggccactaatttcactagcaaaaacctgaagtagcatgatagttaaaatatttattgatgtactagatcagctttacctattggagtattttcataatgatttcaatttcagggatttgtccaataacagcttatctggcccaatacctgattttctagtgcaaatgccagcactcaagttcctgtaagtattcttcttagccaggattcgctttacaataaattacaccagtatgttaagaatgtacttggtttttacagtgatttgtcaagcaataaactcagtggatcgattccttctgacttacttcaaaagagagaaaatggatcacttgtattaaggtctgcaactctggatcatcttgtaaactcataccttgccaaacatcccctgatggacctgtgatctatgtagttgtgttcctgttgccaaaatatctgtatggacctagagttagaatttagagtcaatctagtctctaaatttaactaattcagaattgtttctcttatgctaggattggcaacaatgcaaatctctgctataatggggctaataatacctgtgctccggagagtaagcaaagcaagagaatccttgtgattgcaatagctgttccaatagttgcagcaactctgctgtttgtggcagcaaaatttatccttcacaggaggaggaataaacaaggtaatcaatcaacagttcatcaaaagaacaactgaacctgcattttctgaagattgttcatataagatgacttttgattatttcagatacctggatcacaaacaatgcaagacttattagccctcacgaaaggtcgaacgtattcgagaaccggcaattcacctacagggaattgaaactcatgacatcaaacttcaaagaggaaatagggaaaggaggattcggcactgtcttcctaggatatttggaggatggaactccagttgctgtcaagatgtgctcaaaaacatcttctgaaggggataaaaagtttttagctgaggtaatctatcaggttgttcagttgaaattcatctttttacgcgtgccgggaataaataattgcccttgttccatttttcaggctcagcacctgactagagttcatcacagaaaccttgtttccttgattggatattgcaaggataagaaacatctggcacttgtttatgagtacatgcaaggaggaaacctggaggatcgtttaagaggtaagctatttggcaacatactgtttcacccattgctaaatttcagttttaaacattattctttaccaaacatagtcagtacatttgtgtgctgttgattataaccctgaatgtgtgctgttgtgttatgctaatttctcagttctgaatgctgcactcatgtgtccactctccaactatttttaaaaaaagctttttcatatccatttattttgcatgattttcatatccatcttaatttctttttataattattctgtcacaggagaggcctccattgctgcaccactcacctggcatcaacgtctgaagatcgctctcgactctgctcaaggtatatacaagactgcacagtaattgcacacacctgaaaacatgttcaaagcctgacacatttgaccaaaatttggacaaatttcaactgtccatggatattgcaggattggagtacctgcacaagtcatgccagcctccattgatccacagggacgtcaagactcgcaacatcctcctctccggcgacctcgacgccaagatcgccgacttcggcctgaccaaggtgttcgccggcgacgtcgtgacccacgtcaccacgcagccggccggcacgctgggctacctcgacccggagtactaccacacctcgcgcctcagcgagaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcgtcaccggccgcccaccggccgtccccctcggcgacggcgacggcggcggcggcgagagcgtccacctcgccgtgtgggcgaggcagcggctggccgagggcgacatcgagagcgtcgcggacgcggccatgggaggctgcttcgaggtgaactcggcgtggaaggtggcggagctggcgctgcggtgcaaggagcggccgtcgcgggagcggccggccatggcggacgtcgtcgccgagctgaaggagtgcctcgagctggaggcgtcacgcgcgctgggacgcggctacagctgctacagcagcggcagcggcggcggcagctcggtggcgacgacgacgacgacgagcggcgccgccaatatcagcgcggcggcgtcggcggcgagtgtcagtgacgcccagatcggcgagctgaggcaggagagcgtgctcgagctgggaccaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0567500, RefSeq:Os12g0567500