BGIOSGA007471

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Revision as of 02:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007471| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007471, complete gene.| tag = OS02G01...")
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Gene Name

BGIOSGA007471

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007471, complete gene.

LocusTag

OS02G0133100

Ensembl Transcript ID

BGIOSGA007471-TA

Ensembl Protein ID

BGIOSGA007471-PA

Length

4344

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1927930..1932273

Sequence Coding Region

1927930..1927963,1929208..1929505,1929587..1929686,1929769..1930035,1930128..1930205
,1930292..1930393,1930474..1930523,1930616..1930715,1930819..1930917
,1931011..1931127,1931456..1931582,1931665..1932062,1932169..1932273

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1927930..1932273 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1927930..1932273 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGGCATCTCGATCGCCTCGCGCGGCCATGTTTTGAAGGGTCTTCAAGTAATGATGACAAGAGAGATCACAAGTCAGACGTTGAAAATTCTGAAGATGACAAGAGAACAAGAATGGGTTCTCTGAAGAAAAAAGCTATAGATGCATCAACCAAAATTAGGCATTCCTTGAAAAAGAAGAAGAGGAGGAGCGGCAGTCGGGTCCTCTCCGTGTCTATTGAAGATGTGCGTGATCTAGAGGAGCTGCAAGCAGTTGAAGCATTTAGACAAGCACTGATTTTGGATGAGTTGTTGCCTGCAAGGCATGATGACTATCATATGATGCTGAGATTTCTAAAAGCAAGGAGATTTGACATTGAGAAAGCAAAGCAAATGTGGACTGACATGCTTAAATGGAGGAAGGAGTACGGTACAGATACAATTGTTGAGGATTTTGATTACAATGAGTTAGACGCTGTTCTGCAATATTATCCTCACGGTTATCATGGAGTTGACAAAGACGGGAGACCTGTTTATATTGAAAGGCTTGGAAAGGTTGACCCCAATAAGCTTATGCATGTAACAACAATGGACCGATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAATTGATGCTAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAAGAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAACTATTTTCGTCAGTCTTGCAAAGGCTGGGAGATCTTGAAGAGAAGTTCCTGATGCTTCAAGATAAGCCTTCAGAGATGCCCTGCGAGAAAGAAGAGTTGCTTAATGCTGCTGTCCGCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGAGGAACTACTAGCCTACATCGACAGTAAGGAGGTTGCCAAGGCTCAGAAAAAGAAGAAGGCGATGTTTTGCTATTAG</cdnaseq>

Protein Sequence

<aaseq>MSGHLDRLARPCFEGSSSNDDKRDHKSDVENSEDDKRTRMGSLKKKAIDASTKIRHSLKKKKRRSGSRVLSVSIEDVRDLEELQAVEAFRQALILDELLPARHDDYHMMLRFLKARRFDIEKAKQMWTDMLKWRKEYGTDTIVEDFDYNELDAVLQYYPHGYHGVDKDGRPVYIERLGKVDPNKLMHVTTMDRYVRYHVKEFERSFLIKFPACSLAAKRHIDSSTTILDVQGVGLKNFSKTARELIVRLQKIDNDNYPETLYQMFIVNAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEVIDASELPEFLGGACTCPEYGGCLKAEKGPWKDQNILNIVLSGEAQCARQIVTVSNGEEKIISYAKSKHHTIRGSDTSTAESGSEAEDVTSPKVLRSYISHPKLTPVREEVKMVRATSFSTRMPEYDVPVVDKAVDATWKREVTRKTAFSSKDSSLTSTESSSNGSLDRIVAVLLAVFMAIITLVRSVKDLAAKRLPDKNESEQKYSTLYPDSMPKEEFRPPSPTPGFVEAELFSSVLQRLGDLEEKFLMLQDKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIRQEELLAYIDSKEVAKAQKKKKAMFCY</aaseq>

Gene Sequence

<dnaseqindica>1..34#1279..1576#1658..1757#1840..2106#2199..2276#2363..2464#2545..2594#2687..2786#2890..2988#3082..3198#3527..3653#3736..4133#4240..4344#ATGTCGGGGCATCTCGATCGCCTCGCGCGGCCATGTGAGTTGGGGATTTTGATTTTTCTCTCCGTTCTGTTTTTTGGGGTTTTTTTTGCTCGATTTTTTTTTCCTGGGAGATTTGATTGCTGGGGGGTTATGAGATTGGATTGGATTGGCTGCATTGGGATGTCTCGCCGTGAGGATTGGCCTGCACTGGCGCCGCGTTAGAACCCGGATTAATCACAGAGACTAGATTAGATTTAGGATTTAGGCGAATCAAGCTCGCTGCGAGTTCTCTCGCTTCCGTGTGTTCTGGTTTGGAATAAGTTAGGGCTTAGTATCCATCGAGTCGTAGGACGGTTTGCGTCCAGTCTATGTGTGGTTCGAGTTTGACCGGTTCAATATTGTGCTGTTCTGGTCTTGTTGAAGGTTCCATGTTCTCTGGTTTTGATGGACGCGTAGCTCCCAGAATGTGAGTGGCCAGGCTAGGTTGGATGCTTTGACTTGTGAAGCATAAAATTCACGGGGGACTTTCGGTTTGGTGCTGGATTTTTCTGTGACAGGAAACTAACTTACTATATAGGCTTCAACTTGATTGAAGGGAGAAAATGTTTTTGATACAAGGAGAAGGTTTCATGTCGATTTCCGCATAGAACACTGCATTGACCAGTTCAATAACCTCAAGCTCCGCACAATCTTAAATTCATGAATTCTGAATCTGGTTGACTAGATGGCCAGAAATTTCAACGCAGCGTACACTAAAAGTCACAATTAAGAACACATATATCATGTTGGGTAGGATTTTGATGTTCATCATCTTATAAAAAAGAATTGAATAAATCCTTTTTAGGTAGAAACTTGTATTGTTTGGGTATAGTTGTTGACAAAAGTTACATAACATTTGTTGACAAAAGTTGACAAAATTTCCAGCTGTAACCATTTGGATACATAAGGTTGTTAGTATTGAATTATCTAGTTGTGTAACTAAGCTAGTTTGGTGGATTCATTGTTGTGAACAAAGCTATTCCAATGCTTAGATTGCTGAAAAATTGACATCACCTTGTCTTCTTGCTAGCATGAAGAGTTTAGACAAACTTAATTTTATATCTTAAATACGTTGAGCGGTTGTCAAAGTTTATTTATTTATTTATGTACAAGTAGCTAATTGTTGTAAATTTGCACGATTACCGAGATTTTTTTCCTTTTCTTTCTTTTTTGGATGTGGTGGGGCATGAGCAGTTCTTTTGTTTAGAATGTTTAGAAATATCACCCTTTATCTGCATTCTAAAATTTCCAATGATCCAGGTTTTGAAGGGTCTTCAAGTAATGATGACAAGAGAGATCACAAGTCAGACGTTGAAAATTCTGAAGATGACAAGAGAACAAGAATGGGTTCTCTGAAGAAAAAAGCTATAGATGCATCAACCAAAATTAGGCATTCCTTGAAAAAGAAGAAGAGGAGGAGCGGCAGTCGGGTCCTCTCCGTGTCTATTGAAGATGTGCGTGATCTAGAGGAGCTGCAAGCAGTTGAAGCATTTAGACAAGCACTGATTTTGGATGAGTTGTTGCCTGCAAGGCATGATGACTATCATATGATGCTGAGGTATATATACCCTATTACTTACCATCATTTTTTTAACCCAACTGCAAACATGCTGATGACTTGACTAATTGATTTGTGTAGATTTCTAAAAGCAAGGAGATTTGACATTGAGAAAGCAAAGCAAATGTGGACTGACATGCTTAAATGGAGGAAGGAGTACGGTACAGATACAATTGTTGAGGTTAGTGTTCTTGCTTGTGCCTATAAAACAATTTGGATTTTGTTTGGCTATAAATAATGCCTGTAACTACATTTCTCTGTAGGATTTTGATTACAATGAGTTAGACGCTGTTCTGCAATATTATCCTCACGGTTATCATGGAGTTGACAAAGACGGGAGACCTGTTTATATTGAAAGGCTTGGAAAGGTTGACCCCAATAAGCTTATGCATGTAACAACAATGGACCGATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGTATGCTGCTGAAGCTTTAATCTCCAGACTGATTATTCTTTCTTTTTTTTCTTTTCACTCAGGCATGTGCTAATTGAGCACATTCTTTTCAGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGGTACTGTCTTCTACTCAATTCGCTGATAAGCACAGTACTGTGTTAATTTTCTTGCTAACTTTTTTTTCGTGGTTTTATGTGTTCAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTAAGTCTTTATTCTTACTACACTTCAACTTTTGCATGGGAAAGATACTTAGTGCCTAAGGTAATTATATATTTCTTCAGGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAATTGATGCTAGGTAAGTAATGTTCAATGTACTCTTGTTGGGACACTCTTTTTGTTTGTTCTTCATTTTCTTTAATGTTCCTTCCATTTTAATAAATTAATCAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATGTACGTTTGATTTCTTCCTTACTGTTTGTCTATTCATTATCAGTGCATTGCTTTCTATACCCTTCCTCATATGTTTTAATAATTTTTTTTATACTGATACCAGATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAGTATGTCTCACAACTCAGTACTATTTTTCTATTGCTTTCTTTGCCTTGTGCTCTATGCAGAAACCTAAATCTTGCTTTATTCTGGATTGCTAGATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAAGAGGTTGGTAGTTTTAGTTTTGTTATCCAGAACTGTTTCTTGGTTGCAAGAATATATTCTACAGTACCGTCTGTTGTTTCCTTCCTCCCTATGCCTATTTGTTGAGAGCAGGGAAGGAGGCGGGGCACATTAAAACTAAAATATAACTTATGTTTCTTTGTTGTTTTACATAAATAATTTCATCTATTTTATAGAAAGTGCAAACTAAGCAGTACTGAAGTGAACTAGTGATGCTGGCTTGCATCCTCTTATGTTACAAAATAAATGCTTTCTCCTTTAAGCTCTGTTATTATGGATTATGCCACTTAAATTAAATCATTTCCTTCTTCAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGGTTTGTTGGTAATATAATTGTAAGATCTGAAATTTACCTTTGGTTGCTGCCAAAACCTGATGATTCCCTCTCTTCAATATAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAACTATTTTCGTCAGTCTTGCAAAGGCTGGGAGATCTTGAAGAGAAGTTCCTGATGCTTCAAGATAAGCCTTCAGAGATGCCCTGCGAGAAAGAAGAGTTGCTTAATGCTGCTGTCCGCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGTAAACAATTCTGAACTGCGAAACTTTACATTATAGTATCGTTTATCACTACTTTATTAGGGTATGTGAAACATGTCAGCTGATCATTTGCAAAAATTTTCTCAAGGCCCTACATGAGGCTCTTATCAGGCAAGAGGAACTACTAGCCTACATCGACAGTAAGGAGGTTGCCAAGGCTCAGAAAAAGAAGAAGGCGATGTTTTGCTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007471

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