BGIOSGA007475

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Revision as of 02:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007475| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007475, complete gene.| tag = P0585B0...")
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Gene Name

BGIOSGA007475

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007475, complete gene.

LocusTag

P0585B01.16

Ensembl Transcript ID

BGIOSGA007475-TA

Ensembl Protein ID

BGIOSGA007475-PA

Length

4267

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2018588..2022854

Sequence Coding Region

2018588..2018870,2019212..2019353,2019763..2020108,2020243..2020485,2021062..2021118
,2021257..2021337,2021575..2021636,2021840..2022854

Genome Context

<gbrowseImage1> name=IndicaChromosome02:2018588..2022854 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:2018588..2022854 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGCGCCTCGGGGTGCGAGGAATTTTCCTCGCCTTTCCTTTTCTTTCCAAGGCGAAGAGCACTTTTTGGCTTCTTTTTTTTACCCACCCTTCCTCTTCTTCTCTTCTCTCGCCCAACCAATCGCCTTCTCGGATTCTCCTCCTCCGCAAGCCCAGCCCTGACGTTGTCTCGGACACCCAAAGGCTGTGTTTGATCTCCGCCCGCCACCTGTCTTCCTCCTCCTGCTGCGCGCGCGCCTGCTTCTTCTTCCCGTTGAGCCAGAGAGCGGTTCTTGGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAATGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCAGGGTAGTATGCACAGAAGGACCGGAGCGTGTGAAGGAGCTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCACCTTGCAAGGGAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGGAAGAGAGATCGAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTTTGGCCACCACTTTGCCATTGATTTACTCACCTGTCAGAGTAATGGTGAAATATATTGCTATGGTGTGGATTCATTGGACGCTGAAACTCAGAAGGCAATTCGTTTCATCTCGAAAGTAACATTGCTTGCATCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTAGCTACTGGGGATGGAATTGCAATGTCTCATCGTGCGCAGGCTGTAATATCTAATATGGAGTTTGTGCAGTTCCACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAGAAGAGAGAATGCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAATCAGTCCATGGAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGATGTGGTCGCAAGAAGCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCTGGATATCAGTCACAAGCCAAGGGAAAAGGTTCTTGCCCATTTTCCAAACATTGCAGCTGAATGCCTGCGCCACGGTCTCGACATCACACAACAGCCGATACCTGTTGTTCCTGCAGCTCATTACATGTGTGGGGGTGTCCGGGCTGGGTTGCAGGGGGAGACAAATGTGAAAGGCCTGTATGTTGCTGGTGAGGTTGCATGCACTGGATTGCACGGTGCTAATCGGCTTGCAAGCAACTCACTGCTTGAAGCACTGGTGTTTGCTCGGAGAGCAGTGCAGCCTTCAATAGATCATATGGTCGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAATGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MWRLGVRGIFLAFPFLSKAKSTFWLLFFTHPSSSSLLSPNQSPSRILLLRKPSPDVVSDTQRLCLISARHLSSSSCCARACFFFPLSQRAVLGAEPGMAALMNGFGSLQCKATVHVEKGHMQASGMAFFSPVNRCAQVHISSIPHFIGAKSVSASQLRMRHKVGSIRASAASCLQDETTKYFDFVVIGSGVAGLRYALEVSKYGSVAIITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDEETVRVVCTEGPERVKELIAMGASFDHGEDGRLHLAREGGHSHNRIVHSADMTGREIERALLQAVDNDDNISLFGHHFAIDLLTCQSNGEIYCYGVDSLDAETQKAIRFISKVTLLASGGVGHIYPSTTNPPVATGDGIAMSHRAQAVISNMEFVQFHPTALSDEGLPIKPATRRENAFLITEAVRGDGGILYNQSMERFMTSYDDRAELAPRDVVARSIDDQLKKRGEKYVLLDISHKPREKVLAHFPNIAAECLRHGLDITQQPIPVVPAAHYMCGGVRAGLQGETNVKGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHMVDADVDPSFAKKWARPVLSVSLRDSILSDIIEKTKQARMELQSIMWEYVGIVRSTNRLKHAEWKISDLESEWEEFLFRRGWKPTMVGVETCEMRNLFCCAKLVVKSALARHESRGLHFTEDFPYLEESKRKPTVIFPTHIQELTWSSKPLQKQLQCK</aaseq>

Gene Sequence

<dnaseqindica>1..283#625..766#1176..1521#1656..1898#2475..2531#2670..2750#2988..3049#3253..4267#ATGTGGCGCCTCGGGGTGCGAGGAATTTTCCTCGCCTTTCCTTTTCTTTCCAAGGCGAAGAGCACTTTTTGGCTTCTTTTTTTTACCCACCCTTCCTCTTCTTCTCTTCTCTCGCCCAACCAATCGCCTTCTCGGATTCTCCTCCTCCGCAAGCCCAGCCCTGACGTTGTCTCGGACACCCAAAGGCTGTGTTTGATCTCCGCCCGCCACCTGTCTTCCTCCTCCTGCTGCGCGCGCGCCTGCTTCTTCTTCCCGTTGAGCCAGAGAGCGGTTCTTGGTGCAGGTGAGGCACCAAGATCTCCCTCTTCTTCCTCCTGCGATTCAGCGAAATCTTTAGGTAGGTAGGAGTAACTCCAAGTCAATGTTTTTCTTTCCCTTTTTTTGTTGTTGTTGTTGGAATTTTCACATGTGTTTGGCATGATCTCGAAACAGCAGCGATCTTTGTATGATCTCCATGTTTGTTGGGATTTGGTGATGTGATATTGTGATGTGATTCATCGGGATCTTCTCCTCCTTTTTCGTCTGGTTTAGATGCTGCATCTGCATGCGTGCTCGCTGAGAAATCCCCCGTTTGTTTTCGCTCATCTTGATCTGTGTCTGTTGCTTTCGTCTCGTCTTGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAATGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGGTGATCTTGATTCTTGCAGCTCTCAGATTGTCTTTGTGTGTGCTTGTTTCCAAATGTTCATCAGCTTTATTTTTGGTAGGAAGCACAACACTTCGGTTTTGCTGCTTACAAGAATTTACCTTTTGAAAAGCTGATGTTTTAAAGTCCTCATCCTTCTTTGACCCTGAATTTTGCCTAAAGAAGTTCTCTTGGGGTGGGTGGGGGGAATGGACGCTGATGCTTCAAAAATGGGAAGAACATGATTCAGCTAGGAGACTGAGAAGTCATGTGAAAATTCGTCAGTTTGTTTTTACTGTCAATTTTAACAGTGTCACCTATGGCAAATTGCAAGCTTTGATGGAAGATTCTGAAACTGTTGTATTGTTTAAAGCTGATGACACTGTACTGATTGCGCTTACTGATTCTGTAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCAGGGTAAGTTCAGCATCCATCATGAAGGCAATGGTTGATTTGTCATCTAGAGCAATATGATCAATGCGTATTTCCGTTGTCCTTTCCTGTTATAAAAATCACAATACTGGATTAGTACATTCCATTTTATATTTCAGGTAGTATGCACAGAAGGACCGGAGCGTGTGAAGGAGCTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCACCTTGCAAGGGAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGGAAGAGAGATCGAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTTTGGCCACCACTTTGCCATTGATTTACTCACCTGTCAGGTTGGTTAATTGACATGTTACCTCTTGCTTCATTCTTGAGTGTCCTGCGTTATAGTCCTTTTTTTTGTGGACAATACTTTTGTTGATCCTGCATAACAACAAAATTCAATATATAACTTGCTTGAAGTAATGACCCTAGCTTCTATTAGTTTGGACCTAAAAAAATAGTCTAATGGAAACTGAACTAGAAGCGACAGGGAACTCGTGATAACTGGCACTATCACTGTCGGCTTCCTAACTCTTGTCGGTAGCTGCCTCTTAATCGTGGCGTTTAACGTTTGACTAACTACTGATAGAGTCAAATCTGGAATTATCTTTAATAAGCTGCACGTGTTACATTTATCTTTTCTAGATTATCCTTGTCTCCACTCCTATTTTTTAATTACAATGTCTCAATCACATTATGATTTCAACATTTTTTACTTAATCTATTCCTGAGAGTACGATAAGAGTATGAACAAATTGAAACGTTTATATTCCATAAATGAAAATGCATGCGCTACATACCATAACCAAATTTGCACATCCTATTAGTAGACTGGAATGACTTGACTAACAGGAGGTTTTCTGTTGCAGAGTAATGGTGAAATATATTGCTATGGTGTGGATTCATTGGACGCTGAAACTCAGAAGGTACATCAGCTGTAATTTTGCTTACATTTCCTCCTGCCAGATTTGTCATGCAATTTTTACATTTTCTCTTGTCATATTTTTCATCTTGAAACCATTTATGAACCAGCTTTGTAAATATATGTCCTATGTGATATCCAGGCAATTCGTTTCATCTCGAAAGTAACATTGCTTGCATCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTATATGATACATCACCCTCACAATCTTTAATATTTTTTTCGTATAATGGATTATTTGAAGGCATTAGCTCTACCTTCTGTTCTATATCATGCTCATTTTTTGCTTTGAAACGACAAATATCGTAGATGAACAACCAAATACGATGCACCATGTAGTTTATTATTTGATGGACAATAAGTTGCTGATGTAATGCTTAGTACGATATTTCTTAGACTCTTTGAATCCAAACATTTCAGGTAGCTACTGGGGATGGAATTGCAATGTCTCATCGTGCGCAGGCTGTAATATCTAATATGGAGTGAGTATTTCTTTCCTGAGTACACACCGTTGACCTTTGTTCTCAAAACAAAATTGAGGATCTCCTCATCCATCAGCTTTCAATTCATAGCAATAGCTACCTTAGAAATCACTTTTCCTTCTAACTTCCCTTCGTAAGTTTTGAAACTTTCATCTCGTATCTGGGAAATATAAATGACATTGACACATCCCAAACAATGACAGGTTTGTGCAGTTCCACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAGAAGAGAGAATGCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAATCAGTCCATGGAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGATGTGGTCGCAAGAAGCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCTGGATATCAGTCACAAGCCAAGGGAAAAGGTTCTTGCCCATTTTCCAAACATTGCAGCTGAATGCCTGCGCCACGGTCTCGACATCACACAACAGCCGATACCTGTTGTTCCTGCAGCTCATTACATGTGTGGGGGTGTCCGGGCTGGGTTGCAGGGGGAGACAAATGTGAAAGGCCTGTATGTTGCTGGTGAGGTTGCATGCACTGGATTGCACGGTGCTAATCGGCTTGCAAGCAACTCACTGCTTGAAGCACTGGTGTTTGCTCGGAGAGCAGTGCAGCCTTCAATAGATCATATGGTCGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAATGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007475