BGIOSGA007485

From RiceWiki
Revision as of 02:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007485| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007485, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007485

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007485, complete gene.

LocusTag

OSJNBA0026E05.3

Ensembl Transcript ID

BGIOSGA007485-TA

Ensembl Protein ID

BGIOSGA007485-PA

Length

3284

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2164957..2168240

Sequence Coding Region

2164957..2165007,2166174..2166279,2166580..2166765,2167330..2167806,2167916..2167999
,2168173..2168240

Genome Context

<gbrowseImage1> name=IndicaChromosome02:2164957..2168240 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:2164957..2168240 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGGGGGAGAAGACGTCCGCAAGGTTTCTCGCCAGGACATACAGCTCGTCCAGAATCTTATTGAACGATGTCTTCAGCTTTATATGAACCAGAAAGAAGTGGTTGAGACCCTATCATTCCAGGCGAAAATTGAACCTAGTTTTACTGAGCTTGTCTGGCAGAAACTTGAGGAAGAGAATCGTGAGTTCTTTAAAGCATATTATGTGAGACTTATGCTTAAGAATCAAATAATGGTCTTCAACAAGCTCCTTGAGGATCAGTATCGGCTTATGTGTAAAGAGCAGCCTTCTGGAGTACCTTCTATGCCTCCTACTACTAATGGCTCCAACATGGGCACATTGAATCAAAATGCATGCTTTTTGCCAGACACTACTCCCAGCACTGCAATGCCAGATAGCTTGCTACCCAATGGAAGTTCCAGCGGTATTGTAAATGGCACTCCATCCAGTGACCAATTTATCTATGCTGGTAAAGTCATTCATGGTCTTCCTAGCAGTATGGATGCTTCATCTAGTCTACTGGCAGCACATAACTCAACTGCTGGGAGGTTTAATGGAGACAATGGAACAACAATCAAGACAGAAGCAAGCTACTCGGGCAACTCTGATTTTGGTTTCTGCAATGAGAGCGCTTTCCTAGAACCTTGCCAGTCAATTGGGGATGCCTCTGGTGGATCCTTCAGCAGCTCTGAGCTGAATGGACAGCCACTAGGTGATCCAATTATGGACATGGATTCATCATCTTTTGGTTTCTTGAGCCAAATTCCTCGGAATTTCAGTTTTTCAGATTTAACTGAAGACTTTAGCCAAAGTGCAGAAATATTGGAGAATTATGGCAGATCCCCTTTTATCCCTTCTGAACCAAATAATTTCTCAGAGTCTACTCCTGGAGACCATGCAGAAATAGGAAATAGACGGCTAGATACCATATCCGAGGGTGTTAGTTATGAAGATTTTGGAAGCGATTAA</cdnaseq>

Protein Sequence

<aaseq>MSGGEDVRKVSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYYVRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTNGSNMGTLNQNACFLPDTTPSTAMPDSLLPNGSSSGIVNGTPSSDQFIYAGKVIHGLPSSMDASSSLLAAHNSTAGRFNGDNGTTIKTEASYSGNSDFGFCNESAFLEPCQSIGDASGGSFSSSELNGQPLGDPIMDMDSSSFGFLSQIPRNFSFSDLTEDFSQSAEILENYGRSPFIPSEPNNFSESTPGDHAEIGNRRLDTISEGVSYEDFGSD</aaseq>

Gene Sequence

<dnaseqindica>1..51#1218..1323#1624..1809#2374..2850#2960..3043#3217..3284#ATGTCCGGGGGAGAAGACGTCCGCAAGGTTTCTCGCCAGGACATACAGCTCGTGAGCACCACAGGAACCCTGATCCCTAACCTTTTCTCTCCCCCTCAATTTTTTTTGAGCCTACCTTGGTTGTGCATGCGCTGTGCTGTTTGTCCCCCTTCTTCACGACGATTTTCAAGTTATACGTTATCATTCAGATGCAAGGAATAACCGAAACGCGTGTTGTCGTAGCTACCATGTTATCATTCAGATGCAAGGAATAACCGAAACGCATGTTGTCATAGCTACCATGCTATCATTCAGATGCAAGGAATAACAGAAACGCATGTTGTCGTAGCTACCATGCTATCATTCAGATGCAAGGAATAACCGAAACGCATGTTGTCGTAGCTACAATGCTATCATTCAGATGCAAGGAATAACCGAAACGCATGTTGTCGTATCTACCATGTTATTAATCAGATGCAAGGAACAACCGAAATGCATGTTGTCGTTGCTACCATGTTGTCATTCAGATCCAAGGAATAACCGAAACGCATGTTGTCGTAGCTACCATGTTTCCTTTATATGTATATTTATTAGTACCTTTTATGCCTTTCATAATTGAATGGATTGACATGGCTGGCGAATGTCTGTGTTGCTTTAATATGCCCTCATTTGGGCTTTTATGTACTAGGGTTAGTTCGTTATTTCAGTATATGCGCGATCCCGTGTTGGACTTTAGTTAAAGATCATGTGCTGGAGTCACTGCAGGACAAGGTTGTCGGAAGGAGAGAGAAAGGAGAGCAAAAGAGTTTGGGGATGAAGGGAAAAGGGGAAAGAAATTTAAGGAAAAACACGTGGCCCAATTTATTATTTGAAGCTGAAAATCTCATAAAGCAGAATTATGATGTCTAACGGCATAATTGAAAATTTGAAACTCTTTATGTGCGTTTCTTTCCTTTTCTTCAAGTCAAATGCTGAATAGGCAACCGCTCTTGCTTCAATATCCAATGCTTAAAAAAGAACTTCTGAAAAAAAATCATTGTAGTGTTCCCTTACCTTTCCTTTTTTAATATGCAAGATATGCTCTCTTTTTTTTGTCGGATGTCCTTTATCATTTCTTGTACTTTCTCATTTATTTTGACTCTGTTAACACTTTTGTGTGAACATATTGGAAACTCTGTAGTTGTACTTCTCTCTGCATACTTGAAGCAATAAGTCCTCATACAAAAATTGTTTTACAGGTCCAGAATCTTATTGAACGATGTCTTCAGCTTTATATGAACCAGAAAGAAGTGGTTGAGACCCTATCATTCCAGGCGAAAATTGAACCTAGTTTTACTGAGCTTGGTAATACCCTTATACAGATTTTCTTTTTCTTGTTGTGCACTGAATGTAGCATAACTATAACTTGGTTGACTTCCCATTGCATATTGACATAGCAATATAGCATTCATGGTGCACCAAGCCTTTGAATTTTTATGAGCCAATGGTTAATATCGGACAGGAATATGTGTGCTTTCTAATACAATTTGGAGGGCATTAATTTCATTCCGTCGTAATTCATAAACAATTGGTTCTCCGATTGCTGTTTTTAATGGTAAAACACAAACACGTTTGCCTCTATTTCTCACTGTTGTTTTTCTCCAGTCTGGCAGAAACTTGAGGAAGAGAATCGTGAGTTCTTTAAAGCATATTATGTGAGACTTATGCTTAAGAATCAAATAATGGTCTTCAACAAGCTCCTTGAGGATCAGTATCGGCTTATGTGTAAAGAGCAGCCTTCTGGAGTACCTTCTATGCCTCCTACTACTAATGGCTCCAACATGGGCACATGTAAGTATATGTTGTTTTTTTTTTCATCAGCTGTCTATACAATGATGTTACCTTGCTTACTGTTCAACAAATCCCTCTAAACTATTTCATTCTAAATTGATGCTAGAGGTTGTTTACCCTCTTATTCGGGTAATATAGCTGTTCCGTCTGTATATATTAAGACAGTAGTAAACTAGTAGAGTGATGTCCGTTTCTTTGTACTAGTGATACAGTATGAAGAATTTATGGGCTTGCCAGTAGTATATCTTGGGATTACCATCGAGTTTAGATGATTTGCAAGTTGCAACTTTGGTAGTTTGGCTCTCCTCAAGATCTAACATTTCCCGCCTTCCAACGAAAATCATAATATCATATTAAGTTGATTTTAGGCCACTTTATGTTTACTAGTTACTACTGTGCTTTTAGAGTTCTCTACTGGCAGTTTTGTTAGATCAGAACAGTATTTGAGAAAGTTTGTTCCCTAGTCCTGAATCCTGATACATAGCTTATTACTAAGTTTGTAATTTTTGTGATGTCCGGACCAAATTTTATTATGTTCTGACATAGTTCACTGTTGACTCTCAGTGAATCAAAATGCATGCTTTTTGCCAGACACTACTCCCAGCACTGCAATGCCAGATAGCTTGCTACCCAATGGAAGTTCCAGCGGTATTGTAAATGGCACTCCATCCAGTGACCAATTTATCTATGCTGGTAAAGTCATTCATGGTCTTCCTAGCAGTATGGATGCTTCATCTAGTCTACTGGCAGCACATAACTCAACTGCTGGGAGGTTTAATGGAGACAATGGAACAACAATCAAGACAGAAGCAAGCTACTCGGGCAACTCTGATTTTGGTTTCTGCAATGAGAGCGCTTTCCTAGAACCTTGCCAGTCAATTGGGGATGCCTCTGGTGGATCCTTCAGCAGCTCTGAGCTGAATGGACAGCCACTAGGTGATCCAATTATGGACATGGATTCATCATCTTTTGGTTTCTTGAGCCAAATTCCTCGGAATTTCAGTTTTTCAGATTTAACTGAAGACTTTAGCCAAAGTGCAGGTATTATTTTCTGTGATATTACCTTTTTTTTTTTTAGTTTTCCTTTTCTTCAGCATTGCTGTTTGCTGTGTAATGTATACATACACCTTTTATTTTGGGTTGTCTGCAGAAATATTGGAGAATTATGGCAGATCCCCTTTTATCCCTTCTGAACCAAATAATTTCTCAGAGTCTACTCCTGGAGACCATGCAGGTTAATTATCCCCTTCCCTCCAGTTTTCTGTTTCGTTCTTATCCACCACCACAGTACACCCCACCCCCACAACATGTAAGGCAAGCTAGACAAGGAAATATTGACTTGAACATACGGCACTGAGGCATTGATGTAACGCTCAATCTAGCTAATGTTTCTCTTGCTATTGTCAGAAATAGGAAATAGACGGCTAGATACCATATCCGAGGGTGTTAGTTATGAAGATTTTGGAAGCGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007485