BGIOSGA007489

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Revision as of 02:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007489| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007489, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA007489

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007489, complete gene.

LocusTag

OSJNBA0026E05.10

Ensembl Transcript ID

BGIOSGA007489-TA

Ensembl Protein ID

BGIOSGA007489-PA

Length

3464

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2209022..2212485

Sequence Coding Region

2209022..2209594,2209905..2210117,2210213..2210417,2210569..2210644,2210749..2210884
,2210989..2211093,2211179..2211256,2211348..2211437,2211525..2211590
,2211920..2211976,2212080..2212157,2212249..2212296,2212414..2212485

Genome Context

<gbrowseImage1> name=IndicaChromosome02:2209022..2212485 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:2209022..2212485 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCATGTCGTCGCGCTGTGCGGCTTCCTCGTCCTCATCCGCGTTCCTCAGAGCTCCGCTTCCCGGCGGCAGGCACCACCAGGGCTCTTGCGGCTTCGTCGCCGCCGGCGGCGGTGCTAAGACGACGGTGAGGGTTGCGGCGGCGCTCGACACGGAGGCCACGGCGAAGGCTGGCAAGTCGTCCTCCCGGGCGCGGCGGGCGAGGAAGGACGGCGGCGAGCCCGGTGGCTCCTCCTCCACCGCGCTGCTTGCTCCTACCCATCCCGACGGCGGCGGCGGCGGCGGCGTGGCGCTCGACGACGTGATCGTGAACCCGGTGGGGCTGGGGCGGCGGTCCCGGCAGATCTTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTCGGGCAGATGTCGACGGTGGCGTCGCCGGAGCAGGAGGAGCAGGAGGGCGTCCTCTTCCGCGGCGGCGGCCCGATGTGCGACTTCGCCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGTGGCTACAACGTCAAGGCTCTGGTCAGAAGGAATGATCAAGAAGTGATCGACATGCTTCCAAGATCTGTGGACATTGTGGTTGGTGATGTTGGCGATGCTTCTTCAGTTCAAGCTGCCGTGTCAGGCTGCAACAAGGTAATCTACTGCGCAACTGCACGGTCAACGATTACCGGTGATCTCAACAGAGTTGATAACCAAGGCGTGAGGAATGTCACCAAGGCCTTCCAGGATTACTACAATCAGTTGGCTCAGTCAAGGGCTGGTAAAAGCAGCAAGAGCAAACTGTCGATTGCCAAGTTCAAATCTGCCAAATCTCTTCAAGGATGGGAAGTGAATCAGGGATCATACTTTCAGGATATTTATCCTTCTAGATTCGATGAAGGCACCGATGCATCGTTTGAAATATCTGAAAATGGACAGGCTGTTTTCTCAGGGTTTGTTTTCACAAGAGGTGGATATGTTGAAGTGTCGAAACGGCTTTCGCTCCCACTAGGTTCCACCCTAGACAGATACGACGGCTTACTTCTATCCGTGGGTGGAAATGGAAGATCATATGTTATCATCCTTGAGACTGGTCCACTAGCTGACACCTCACAGAGCAAGAAATATTTTGCTCGGATGAACACTAAAGTAGGGTTTTGCAGGGTGAGAGTGCCGTTCTCAGATTTCAGGCCAGTGAACCCACAGGACCCTCCTCTTGACCCTTTTCTTGTGCACACATTAACCATAAGGTTTGAACCCAAAAAACAGAGACCTGGTGACTCGTCTCAAGGAGCTAGTGACCCAAGAAATTTCCAGCTTATAATGGAATTTATAAAAGCTCTACCTACTGGTCAAGAAACAGACATTGTTTTGGTTTCATGCACAGGCTCTGGAATCGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAGAAGGCTGGAGAGGATGCACTGAGGAGATCCGGCCTCGGATATACAATTGTATGCCCAGGTCCTCTGCAGGAAGAACCTGGCGGTCAGCGTGCTCTGATCTTTGATCAAGGGAACAGAATCTCTCAGGGTATCAGCTGTGCCGACGTAGCAGATATCTGTGTCAAGGCATTGCACGATTCAACAGCAAGAAACAAAAGCTTTGATGTGTGCTATGAACATGTCTCAAAGCAAGGGGATGAGTTGTATGAACTTGTGGCTCATTTGCCTGACAAGGCGAACAATTACCTGGCACCAGCTCTCTCTGTTCTTGAGAAGAACACCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAMSSRCAASSSSSAFLRAPLPGGRHHQGSCGFVAAGGGAKTTVRVAAALDTEATAKAGKSSSRARRARKDGGEPGGSSSTALLAPTHPDGGGGGGVALDDVIVNPVGLGRRSRQIFDEVWRKFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDFAVPGAQDTTVLVVGATSRIGRIVVRKLMLRGYNVKALVRRNDQEVIDMLPRSVDIVVGDVGDASSVQAAVSGCNKVIYCATARSTITGDLNRVDNQGVRNVTKAFQDYYNQLAQSRAGKSSKSKLSIAKFKSAKSLQGWEVNQGSYFQDIYPSRFDEGTDASFEISENGQAVFSGFVFTRGGYVEVSKRLSLPLGSTLDRYDGLLLSVGGNGRSYVIILETGPLADTSQSKKYFARMNTKVGFCRVRVPFSDFRPVNPQDPPLDPFLVHTLTIRFEPKKQRPGDSSQGASDPRNFQLIMEFIKALPTGQETDIVLVSCTGSGIEPNRREQVLKAKKAGEDALRRSGLGYTIVCPGPLQEEPGGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEHVSKQGDELYELVAHLPDKANNYLAPALSVLEKNT</aaseq>

Gene Sequence

<dnaseqindica>1..573#884..1096#1192..1396#1548..1623#1728..1863#1968..2072#2158..2235#2327..2416#2504..2569#2899..2955#3059..3136#3228..3275#3393..3464#ATGGCGGCCATGTCGTCGCGCTGTGCGGCTTCCTCGTCCTCATCCGCGTTCCTCAGAGCTCCGCTTCCCGGCGGCAGGCACCACCAGGGCTCTTGCGGCTTCGTCGCCGCCGGCGGCGGTGCTAAGACGACGGTGAGGGTTGCGGCGGCGCTCGACACGGAGGCCACGGCGAAGGCTGGCAAGTCGTCCTCCCGGGCGCGGCGGGCGAGGAAGGACGGCGGCGAGCCCGGTGGCTCCTCCTCCACCGCGCTGCTTGCTCCTACCCATCCCGACGGCGGCGGCGGCGGCGGCGTGGCGCTCGACGACGTGATCGTGAACCCGGTGGGGCTGGGGCGGCGGTCCCGGCAGATCTTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTCGGGCAGATGTCGACGGTGGCGTCGCCGGAGCAGGAGGAGCAGGAGGGCGTCCTCTTCCGCGGCGGCGGCCCGATGTGCGACTTCGCCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGTGGCTACAACGTCAAGGTCACTTACTTTTACCTCTTCTTTCTTGTCAAGCTTTCTCATGTCAAATCAACAAATTTTGATCAAGGGTGTGTTTAGATCTTTGGGGGTAAAGCTTTTAAAGTATACTGACACATATTTGAAGTATTAAACGTAGACTAATAACAAAACATTACAGAGTCCATCTGTAGACTGCAAGATAATCTTATTAAGGCTAATTAATCCGTCATTAGCAAATGTTTACGGTAACATCACATTGTCAAATTATGGCGTAATTAGGCTCAAAAGATTCGTCTTGCAATTTATCTATGTTATTTTTTTTTTGAAACAGGCTCTGGTCAGAAGGAATGATCAAGAAGTGATCGACATGCTTCCAAGATCTGTGGACATTGTGGTTGGTGATGTTGGCGATGCTTCTTCAGTTCAAGCTGCCGTGTCAGGCTGCAACAAGGTAATCTACTGCGCAACTGCACGGTCAACGATTACCGGTGATCTCAACAGAGTTGATAACCAAGGCGTGAGGAATGTCACCAAGGCCTTCCAGGTAGTTCTTGTGAAAAATCTTTGAAGAAACATGCAAATCAATCTTATTTAGATTTCTGATATGTTTACTGAACTGTGATTTACTTTGCAATTCAGGATTACTACAATCAGTTGGCTCAGTCAAGGGCTGGTAAAAGCAGCAAGAGCAAACTGTCGATTGCCAAGTTCAAATCTGCCAAATCTCTTCAAGGATGGGAAGTGAATCAGGGATCATACTTTCAGGATATTTATCCTTCTAGATTCGATGAAGGCACCGATGCATCGTTTGAAATATCTGAAAATGGACAGGCTGTTTTCTCAGGTATCACCTGATATGAAAGCTATTACATCATGATCTCTGAATTGTACACTATAGTGAGATTGCCTTTTTTAAAAAAGTATTCAGATATATTGCTTCAGTTGATGATTTTTCATTTGTTTTTAATTCTCTTATCAAAATTTTCTGTGATTAGGGTTTGTTTTCACAAGAGGTGGATATGTTGAAGTGTCGAAACGGCTTTCGCTCCCACTAGGTTCCACCCTAGACAGGTGTGATAAGATTCTTCAGTTTATTTTTTCTTAATAAGTTTGCCTGATGTTGCAAAATCATGACATGATCTGTTCTTTGTTATGCTGCCATGTTCTACCTGAAGATACGACGGCTTACTTCTATCCGTGGGTGGAAATGGAAGATCATATGTTATCATCCTTGAGACTGGTCCACTAGCTGACACCTCACAGAGCAAGAAATATTTTGCTCGGATGAACACTAAAGTAGGGTTTTGCAGGGTAAGTGGCAAGTGATGATCCCACTTCACTAAATTACCTGTTTCTGCATTGCTAATCGGAGTGATCAGTTAACTAAATGCTGAAAATATTCTTGTTCTGTTCAGGTGAGAGTGCCGTTCTCAGATTTCAGGCCAGTGAACCCACAGGACCCTCCTCTTGACCCTTTTCTTGTGCACACATTAACCATAAGGTTTGAACCCAAAAAACAGGTCAGTGCAAAATGATTTGTTGAATCAATTGGAGATAGGCAATGCTTCTGGAAGTTGTTAGTTTACCAATAAAATCCTTGTGCAGAGACCTGGTGACTCGTCTCAAGGAGCTAGTGACCCAAGAAATTTCCAGCTTATAATGGAATTTATAAAAGCTCTACCTGTAAGTAATTCACCTGATTCTATCAATTGATCTGCCATTTAAATTTCCAATGTTGCAGATATTTACCGGAAATTTCATTTGTTTTTTGCAGACTGGTCAAGAAACAGACATTGTTTTGGTTTCATGCACAGGCTCTGGAATCGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAGAAGGTATCACTTCTCATAACCACACATCAAATGCAAACTGTTCTTGATGCACTCTTGATACAAACATTAACCAGTTTATTATCTCTCTAGGCTGGAGAGGATGCACTGAGGAGATCCGGCCTCGGATATACAATTGTATGCCCAGGTCCTCTGCAGGTACAACATCTGAATGAATTGGATTGTCTTTTTTTTTCTTTTCCTAAATGTATATTTTCAGCACCAGTTGTTTCTCATGTAGTGCATTGCATATTGATATTGCTGCTGAATTTCAGTACAAGCTGTAGCTACATAAACCTTAGTGTCAAACCGATGAAACTAAATATTCATCAAGCAAGCAGCCAAGATTTAAGCATGCAAGTTGATCACTAATCATAGAATTGAGTGTGAAATTTGAGTATAAATTATGCTTATTTCCAAGCCCCAAATATACTTTCTTCAGTCCATACTACAGTATAGTATAACATAGTATCCCTTCTTCATTCCAGGAAGAACCTGGCGGTCAGCGTGCTCTGATCTTTGATCAAGGGAACAGAATCTCTCAGGTGACATAGCATTCACTGCGTGCAATTATGCCTGATATAATTGCATGTTCAATGTTAGTATACATGCTAACCATTAGGCTTTTCAACTGAAATATAAATGCAGGGTATCAGCTGTGCCGACGTAGCAGATATCTGTGTCAAGGCATTGCACGATTCAACAGCAAGAAACAAAAGCTTTGATGTAAGGAAAAAAAAAACCTTGTATTGTGAACTGGCCATTTGTGCAACAGGTAGTGAAATGACTAACCAGGACACCAACCTGATTTGTGTAGGTGTGCTATGAACATGTCTCAAAGCAAGGGGATGAGTTGTATGAACTTGTAAGCCCCAAAACTGAAACTTCAGTAGATTCATCTTTGTACAGCAATTCGCAAAATTTCTTCTCTGATCTGTCTGTGTTTTGCACTTTTGCTAATGATCTGTCGAATTGTTTTCAGGTGGCTCATTTGCCTGACAAGGCGAACAATTACCTGGCACCAGCTCTCTCTGTTCTTGAGAAGAACACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007489

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA007489&oldid=61041"