BGIOSGA007534

From RiceWiki
Revision as of 03:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007534| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007534, complete gene.| tag = OJ1008_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007534

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007534, complete gene.

LocusTag

OJ1008_C03.26-1

Ensembl Transcript ID

BGIOSGA007534-TA

Ensembl Protein ID

BGIOSGA007534-PA

Length

4332

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3047199..3051530

Sequence Coding Region

3047199..3047243,3047839..3048043,3048377..3048441,3048820..3048907,3049006..3049073
,3049457..3049507,3049978..3050095,3050273..3050319,3050413..3050439
,3050616..3050691,3050966..3051105,3051432..3051530

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3047199..3051530 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3047199..3051530 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGAAAACAGTCCTACAAGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTTCAGACCATGCAGGGGATGGAGATGCTGCTGCACTAAATAAGGGCAAAAAGGCAACACCTACTAGGAGGAAAACCCCTACTAGTCAAGAAGATGCTTTCGACAAAGATGAGAAACCAACCATGGAATCAAATCAAGATAAGCCTCCAAAACGCTCGACTCCAAAGAAGAAGTTGGTTAAACCCCCATCTGGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGATACCTTGGAACATCAAGAAGAGGGAGTTGCTGAAGAAGACATGCAGGATAAACTTACAGAGCACTCTGTCTCCCAGAGGTTGCCATTAATCATTCCTGATAAAATTCAGCGTTCAAAGGCATTGATTGAATGCGATGGTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGGACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCAGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAG</cdnaseq>

Protein Sequence

<aaseq>MGEEEEDPDWLRAFQPPTTSTVMLSSGSDDSPENSPTRTTPSGEEQKGENKASSDHAGDGDAAALNKGKKATPTRRKTPTSQEDAFDKDEKPTMESNQDKPPKRSTPKKKLVKPPSGSNASKVTGPKAGPDQIDDTLEHQEEGVAEEDMQDKLTEHSVSQRLPLIIPDKIQRSKALIECDGDSIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCVVSVGQTEAKIESIMDDFIQLEPQSNLFEAETMMEGTLDGFTFDSDEEGDKLPEPHASQNDQNNEDGDQPKAKTKRKAEKPAGKGQKKAKVAGKATKKGTRKTQTTKRTKKAKK</aaseq>

Gene Sequence

<dnaseqindica>1..45#641..845#1179..1243#1622..1709#1808..1875#2259..2309#2780..2897#3075..3121#3215..3241#3418..3493#3768..3907#4234..4332#ATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGGTAACCATCTCTTCTCCTCCGCCTCCCGTGGCCGTGTGATGTGCCCTAGCTAAATCCTGCCAGGTCTCCGTGGGAATAAGGTCCATCCTGCCGAGCGGTTTCGATTTACCCATTTTTCTCTGTGGATTTAAGTTGAGAATTGAACTGAATTAGTGGGCGCGCTAATAAGTTTGATCTATGTCATTTCACAAAATGGCATTCCGTGTTGTGCTTCTAGGCTATGTGTTAAATATGCTTTGTGATGTCCGTGAGAATTTCGTGCTCTTTGATAATCCTTCGGAACAAGTCGATGCGAATTTCGGTATCAGAAAACGTTGTTTGTACATGTGTTTAACAACTTGTTTACTTGGTCTATGCCAATGGTTGTGCTAAACGGTCCCGCTATGGTATCGCCGATTCCTAGTTTAAACACAACGAACACATGTCTTGATTTTGGTTCCGATGTCCGATAGGCTCCGATGTGAGGCAGCAAGCATGTTCTGTATCTAGTACTTGTTACACTTTCTGTTCTTGGTACAACTTCTTTGGCTTTCCAAGATTGTGACTTGTTATTGGTGATAATATCACCAATTTTATTTTGCATAATTTTTCGTAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGAAAACAGTCCTACAAGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTTCAGACCATGCAGGGGATGGAGATGCTGCTGCACTAAATAAGGGCAAAAAGGCAACACCTACTAGGAGGAAAACCCCTACTAGTCAAGAAGGTATCATTAGTTTACTACTCCCTCCATCCCAAAATATAACAACATCTAGCCTTCATAATTTGCCCTAAAATATAACTTCTTCTCCACATACATTCTCTTCTTAGCCAATCGCAACTTTCCACCATTCAAATCCCTTCCTACCTCCTCTTCTCAATCAATCACAACATTCCTCTATTTAATTCCACCATCTTTCTTAATGCCTGTATTCAACCCTAAAACTCATATTTTGGGACGGAGATAGTAATATTTATTATTTTGTTATGACAAACTTCCAAACTAGTATCTCCTTTTTATTCACTTTCTGATCTATTTTCTCTTCATGGTTGCCTATAGATGCTTTCGACAAAGATGAGAAACCAACCATGGAATCAAATCAAGATAAGCCTCCAAAACGCTCGGTAACTACTATAATTCTTATTTTGTTCTTAATTGTTTAATCCCTGTTCGTGGTACCTCGCCATCTGGTTTCTAATTAGTTATGCTGCTGATATGTGATATGCCCATGTAAAAAGAACAATTTAAAAGATCTATAGATAGATTACGAGCTATCCAAGTTCGAATGAGGTTCAGCAGATTCCCTTTTTTTCTCAAGATGCTTTATTCCTGATGTCAACAATACTTCTTGAATCTTATCTTACAACTGTTCTACATTATTTGTTATTGATCGTCACATAATGCTACTGTTATATTTAATACTGACTTCATTGTACATATTACTTAGTTGCAAACACCAGGTCCACTCTTTTGTTAATTCTATGCCTAAATTTTTTGTACAGACTCCAAAGAAGAAGTTGGTTAAACCCCCATCTGGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGGTAAGACTAATGAAAAGCTTTGGTTGCCTTTTAGTGAAAAGTCAGTTTATGAATTCTTAGTTTCAATGATTGATAATTATAGTCATGGTCATGCATAGATACCTTGGAACATCAAGAAGAGGGAGTTGCTGAAGAAGACATGCAGGATAAACTTACAGAGCACTCTGTAAGATGCCTCAACTTCCTTCTATTTTTAATCTATTTTTTCCTCCACACTACGGTTCCAGAACATTGAGAGCATTGACCCAAACAAGGAGCAAAGAAAACAAAATTAGAGCCCACATCTTACTGGGAATATCCCAACATGTGTCATTTTTGTTATTGCATTATATTGAACTAATGAAAGTTGGGTAAATCCTTTTAAGAAGGTATAGGAAAATATGAAAATAAACATCATTTTGTAAATATTTATCAAGCTCCAACCGATTAGTTCTTTCCTTGATTACCGTAATTTTTGTAGAGCATGATGGCGTGTCTTGTTATTCCTTTAACTAGTTACGTCAATATGTCTGAGATATCTTATGGACTGTAAGCTCTTATGCGTTCCAGGTCTCCCAGAGGTTGCCATTAATCATTCCTGATAAAATTCAGCGTTCAAAGGTATGATAATTCTAACTGGCATTATCAATTAGAAACCATTGTTCTCATAAAAGGGTCAGTGTGTCAAATCATAAGTCCGGAATGCAATGAGCAACTCTGCTATCACCCCCCCCCCCCCCCTTTCCCATATTTTCTTCATGGAAAAATATCGGTCAACTTAACATTGGTGGAAAGAAATTGTACAATTAATAGAAATACCGCAGTGACAGAGCCATAAATGAGAAATGGTTGGGGCCCTTTTTAGTGCACCAGGAGTTAGAAGGAGTATAGGCTATATATATTAAAGAGCCATAGATCCTTGATAATCCACCAAAATGTGTTATATGTGCTAAAATGCAGTAAAATCAACATCTTGACCTCTGCAAGTATCATCTACCTGGAAGACTGGGAATCATGACTGACCCAATCAATGATAGTTTCCCTAAGTTTATAAATTATAATCCTATAATCCTTGTTCTGTTTATTTCTAGGCATTGATTGAATGCGATGGTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAGGTACCAGCAAGTCGATTTCTTTAGTATCATTTATGTATTATGCACTTTGGTTTCTGACTAGGCAGGGTATTTTTACCAACAAGGGATTTGAAATTAATGTCCGTGTTATCTTACTACATGCACTATTCAAAATACTTTACCCATATTATTATTATTTTTACTTATATACTTACACAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTAAGTTACATTCAAACTTAAAGTACAGTTGTGCATTTGCCTTATTTGTTAGTATTGATCTTAAATCCTTGATGGACTGTCTCTTTTTCTCAGGTCAGTGTAGGACAAACAGAAGCGAAGGTTGTCGATGATAACATAAATCTCTTATGAGTATTTGACTTCTCCATAATTTTTAGTTTAGGCAGTTCTACTTTCTAGTATGTAGCGTGCTATTTTTGCTACTAAATCCGATTAAAATATATTATTCTGATGGATGTAGCTGCTTACCTTATTCAACCATTTTTCCCCTTTTGCAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTTAGCATTCTTCTAGATGGTCTAATTAGAAATCTTCAGCCCATATATCCTACTGTTTCTGACCTATAAAGCTGAGCAGCAAACTGCGCGCCAATAAAAGCAGCACTTCTTATCTTCTTGAATGGAGCTATTAACCAATGCATTGTCATTGAACAGTGTAGTCAGGAACAGTCATTCTGCATGAAGTGATGACTAATGACCCTATCATTGGATAGGATGATAACATCTGCTGCAATGGTTATTTTCTAATACTCCAGGCATGTTATCTTTATAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCAGTATGTTCTCTCCTACCCTTTTAATGATCCTATAAGCTTCTTTTCAGTTTCTTTTCTATTACCATTATGCCATCTCAGAATTTAAAACTGATGATGGCACATGTTAGTACAAACTGTATGAATACCTGATTCTTGAACTCCTGAAAGCGCATTACATTACCCTATATAAGTTTGAAACCCAATTGTGGATAGCTTTTCCGGAGGTTTTACTTATGTACTGAAGCACTTTGCCTGTTTTGTATCATGAAATTAAGGAACCATGCTATAAACTTTGCGACATATTATAGTTCCTCATGACAAAGTTTGCTTATTCTTGTGAAATGTAGGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007534