BGIOSGA007536

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Revision as of 03:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007536| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007536, complete gene.| tag = P0479D1...")
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Gene Name

BGIOSGA007536

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007536, complete gene.

LocusTag

P0479D12.10

Ensembl Transcript ID

BGIOSGA007536-TA

Ensembl Protein ID

BGIOSGA007536-PA

Length

2791

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3071837..3074627

Sequence Coding Region

3071837..3073066,3074216..3074353,3074571..3074627

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3071837..3074627 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3071837..3074627 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCTTCTTGCATACCGACCGGCCTGAGGCTGGACCTGGACATGGTGAAGGCGGCGACGTCGCCGGGCGCGCACTCGTCGCCGCTGCGGCCGGCGCACTCGTCGCCGTCGTCGACGCTGTCGGAGGCGTCGAACACGTCGTCGTCGTCGGCGACGTCGGTGTCGCTGAAGCGCGCCAGGGCGCCGCGGAAGCGGCCGAACCAGGCGTACAACGAGGCGGCGGCGCTGCTCGCGTCCATCCACCCCTCCGTCTTCCCCGTCAAGAAGAGCCCCAAGACGGCGTCGCGGCCGCCGACGAGGCAGCTCTCCGGCTTGTCGGCGGTGTTCGACCCCTCCTCCGACCTCCTCCCGCCGCTCCCCGTCCTCGCCGACGCCGCATTCCTCCTCCGCGACACGCCGCCGACGCCGCGGCAGAACTGCTCGTCGCCGGCGCCGGTGAGCAGCGCGTTCCGGGAGTTCCGCGACCCGGCGCCGCTGTCACCGGCGAGCCCCCACACCACCGACGAGCCCGGCGAGCTCGACTTCGACGACGACTGCTTCCTCGACGTCGACGAGGCCGCGGCCGACGGCGCGGCCGGGGGCATCGACGGCATCATGGGCAGCCTCACCGTGGAGACCAACACAGCCGCCGCCACAACCTCCGACGACTCCATCCTCTCCAGCTCCGGCATACACCCTTACCTCAGGAGCCTCATGGTGGTCGGCCTCGCCGGCCGGTTCGAGCTCGGCCTCGGCTCGCGCCACGGCGCGCGGCCAAACCTCAACCGCGCGCTCAAGCGGCGCGACGACGACGGCGCGTGGTGGATGTGGCCGGCCGTGCCAGTGAAAGACATCACCGTGGCGCCGCCGCCGCCGACGCCGACGCCGACGCCGACGCCGCCACGGCCACAGGGGACAGCGTCGAACACCACGGCCGCAATGCCATCGCCACCATCGGCGCCGGAGAAGAAGAAGAGCAAGAAGAAGAAGGTGGTGAAGGTGGAGAAGGTGATGGCGAGGGAGAAGGAGGAGGAGGAGTCGCCGCCCGACGCGAGGTGCAAGGAGGAGGAAGCCGCCGATGGAACAGTGGACGCCGGCAATGGCGACGGCGCGCCGACGATGGCGCCCAAGACCGGGTTGGGGCTGAAGCTCGACGCCGACGACGTGCTCAAGGCGTGGTCCGGCAAGGGGTCGATGTTCGCCGACGGCGGCGCGCCGGAGTCGCCCAAGTCGGCCGCCGAAGTGCGGGCTAAACTTGCAGATATTGATCTGTTCCCTGAGAATGGAAATGGTGCTGGTGGCATCAGGGAAGCCAGCGTCATGAGGTACAAGGAGAAGCGGCGCACCCGACTGTTCTCGAAGAAGATCCGGTACCAGGTCCGGAAGGGAAGGTTTGTTAGGAGCCCATCTCTTCTTCAACAAGTCCTGGAGGAAGAGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MSSSCIPTGLRLDLDMVKAATSPGAHSSPLRPAHSSPSSTLSEASNTSSSSATSVSLKRARAPRKRPNQAYNEAAALLASIHPSVFPVKKSPKTASRPPTRQLSGLSAVFDPSSDLLPPLPVLADAAFLLRDTPPTPRQNCSSPAPVSSAFREFRDPAPLSPASPHTTDEPGELDFDDDCFLDVDEAAADGAAGGIDGIMGSLTVETNTAAATTSDDSILSSSGIHPYLRSLMVVGLAGRFELGLGSRHGARPNLNRALKRRDDDGAWWMWPAVPVKDITVAPPPPTPTPTPTPPRPQGTASNTTAAMPSPPSAPEKKKSKKKKVVKVEKVMAREKEEEESPPDARCKEEEAADGTVDAGNGDGAPTMAPKTGLGLKLDADDVLKAWSGKGSMFADGGAPESPKSAAEVRAKLADIDLFPENGNGAGGIREASVMRYKEKRRTRLFSKKIRYQVRKGRFVRSPSLLQQVLEEES</aaseq>

Gene Sequence

<dnaseqindica>1..1230#2380..2517#2735..2791#ATGTCGTCTTCTTGCATACCGACCGGCCTGAGGCTGGACCTGGACATGGTGAAGGCGGCGACGTCGCCGGGCGCGCACTCGTCGCCGCTGCGGCCGGCGCACTCGTCGCCGTCGTCGACGCTGTCGGAGGCGTCGAACACGTCGTCGTCGTCGGCGACGTCGGTGTCGCTGAAGCGCGCCAGGGCGCCGCGGAAGCGGCCGAACCAGGCGTACAACGAGGCGGCGGCGCTGCTCGCGTCCATCCACCCCTCCGTCTTCCCCGTCAAGAAGAGCCCCAAGACGGCGTCGCGGCCGCCGACGAGGCAGCTCTCCGGCTTGTCGGCGGTGTTCGACCCCTCCTCCGACCTCCTCCCGCCGCTCCCCGTCCTCGCCGACGCCGCATTCCTCCTCCGCGACACGCCGCCGACGCCGCGGCAGAACTGCTCGTCGCCGGCGCCGGTGAGCAGCGCGTTCCGGGAGTTCCGCGACCCGGCGCCGCTGTCACCGGCGAGCCCCCACACCACCGACGAGCCCGGCGAGCTCGACTTCGACGACGACTGCTTCCTCGACGTCGACGAGGCCGCGGCCGACGGCGCGGCCGGGGGCATCGACGGCATCATGGGCAGCCTCACCGTGGAGACCAACACAGCCGCCGCCACAACCTCCGACGACTCCATCCTCTCCAGCTCCGGCATACACCCTTACCTCAGGAGCCTCATGGTGGTCGGCCTCGCCGGCCGGTTCGAGCTCGGCCTCGGCTCGCGCCACGGCGCGCGGCCAAACCTCAACCGCGCGCTCAAGCGGCGCGACGACGACGGCGCGTGGTGGATGTGGCCGGCCGTGCCAGTGAAAGACATCACCGTGGCGCCGCCGCCGCCGACGCCGACGCCGACGCCGACGCCGCCACGGCCACAGGGGACAGCGTCGAACACCACGGCCGCAATGCCATCGCCACCATCGGCGCCGGAGAAGAAGAAGAGCAAGAAGAAGAAGGTGGTGAAGGTGGAGAAGGTGATGGCGAGGGAGAAGGAGGAGGAGGAGTCGCCGCCCGACGCGAGGTGCAAGGAGGAGGAAGCCGCCGATGGAACAGTGGACGCCGGCAATGGCGACGGCGCGCCGACGATGGCGCCCAAGACCGGGTTGGGGCTGAAGCTCGACGCCGACGACGTGCTCAAGGCGTGGTCCGGCAAGGGGTCGATGTTCGCCGACGGCGGCGCGCCGGAGTCGCCCAAGTCGGCCGCCGAAGTGCGGGTGAGTAAATGAATTCACTCAAACATGGCAAATATTTTCCATATAAAAATGGTTTATTAAAATAGGAGAGTAAAACATAGGACACATATATTATATTTGATGAATGAATAAAGTAACTCAACTTCTAAAAATTCATATTTGTTCTGTACGGAGTGATAGCTCATTCAGTATAAAAAAACTCATTTAGTATAAGATAGATTTGGCACAATTTTTAGATGAAATTTACCTCTTCCATAGCATTGTTACTCAGATTGAAGGGACATATTCCAAGCAAAAAATGAACAGATGAACTCTGAATATGTTTTATGGTTAACGTTTTTATTGCAGTTGCATAACAAGAAAGAATTTATGTCATTTGTAGCTTATTTAGTTATTTTCGCCTCCGTTTCTACAATTCTTCTAATAAGAATTTCTTTTAGAATGAAGATACATAAGTTGTATATCCAACCAATTGTTTCCTATAGTGAAAATAACAAGGAAAGAGCCAGTAAAACACGTGTTCGATATGCAACAGCCACTTGGAGAACTAGCCTCTGATTTGGAACTGTTTATCCAAAAGGACGGTCCCTCACAAGTCACAACAGTACAACACTATAGTACTCTAGTACATATTTGTAAGCAAGCACCTTTTGTAGAGTTTCACTGATAGTCTCCAGTAATCCATAAAAATGGATGTATTCAGAAGTGATGAAATTCTGTAAAAAAAACAACACCTAGATAGTTTAGAGGTTTGAAGTAAACCTATGCAGTTAAAATGAATTATTCAACAATGGACCACAGACAATTGGGCCTGGAGATCGTCTGCCATGGATTACATGGTTGTCTTCTTGCAAAGAGTCATTTGGGCTCAAATCTTTGCCCTCTGGGCCAGTGATGGAGCATCTGCAACAAACTCCAGCCCCAATTCAGTTGGCTTTTTCTGCAATTTGCTCTCACAAATGGCAAGATTTGCAGCTGTCATAATGGGGAAACATAACCGTCCCAGATGTGTCCGGCTTCTATGTAGTTTGGACACACTATGCATTGGCATGTATTGCTACTATGAGAAACATTATAACGATGATTCAAACTGTAGACGTAATTTGCATCTCTTTCCTAGGATTCTGAATGAAAAGAAGCACTTACAGTCTTTTTTTACTGCTGGTGCAGGCTAAACTTGCAGATATTGATCTGTTCCCTGAGAATGGAAATGGTGCTGGTGGCATCAGGGAAGCCAGCGTCATGAGGTACAAGGAGAAGCGGCGCACCCGACTGTTCTCGAAGAAGATCCGGTACCAGGTCCGGAAGGTGAACGCAGACTGCCGGCCTCGGATGAAGGCAAGCACTAGAACTGATTCTTGAAAGCATAAAAAAAGGTCCATTTAATTGTAAGGCAAAAACCAAAGAACTCATTGTTCACAACATAATACCCCCATTTGTTTCACCTAGAGCTATACATTATAGCACTATCAGAGCAGATCTTGCAAGTTACTGATTTGTTGTTTCTGTGCTTGGATTCTTGCAGGGAAGGTTTGTTAGGAGCCCATCTCTTCTTCAACAAGTCCTGGAGGAAGAGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007536