BGIOSGA007545

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Revision as of 03:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007545| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007545, complete gene.| tag = P0479D1...")
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Gene Name

BGIOSGA007545

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007545, complete gene.

LocusTag

P0479D12.33

Ensembl Transcript ID

BGIOSGA007545-TA

Ensembl Protein ID

BGIOSGA007545-PA

Length

5088

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3139062..3144149

Sequence Coding Region

3139062..3139540,3139653..3139714,3140685..3140739,3140953..3141027,3141149..3141223
,3141324..3141371,3141554..3141622,3141717..3142526,3142619..3142667
,3143326..3143435,3143550..3143657,3144089..3144149

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3139062..3144149 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3139062..3144149 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACGTGCTCCTCCCGGAGCTCCGCTCTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGACAAATGATGATCGCGCGCGGGCGGTGGACCTGCCATCGCCGACTCCGGAGTGTGACGATCGCTCGCCGCGTCGTGAGCTGGGGCGCTCGCCGGAGGATCACGGCGTGCCGCTCCCTCCCCCGCCACCGCTCGGCTCCTCGCGCCCCGAGCGCCTCGCCAGCGATCGTCCGGAGGAGGGCGCCTCCGCCGCCGCGCAGCCGTGTGGCGGAAGGAGTGAGAGCCCCACGGCGAGGTCCATGTGGCCGCGGAGGCTCTCCCCTGCGTCGTTGCCGCCGCGTGGCGGGAGGAGGAGCGAGAGCCCCACGCCGAGGTCCATCTGGCGGCGGCTCTCCCCGTCCCCGCCCCCGCCGCTGCCGCCCTTGCCTCCCAAGCGGCCGCGCTTGGACGGCCGCCGTAGCCCACCGCGCGGCGGGAGATTCGGATTCGAGCACGAGCGAGGCAGGGAAAGGAGCATGAACACTTCGCGTCGCGCTCCAGATTGCCTGGATTCTGGATGTGATGCCCCCTATAATGGTCAAAGTAACACCCGGAGGAAAGGATTGATGACATACAAACAGTTTACCCAAAAACTTGAAGATGATGTTTCACCGGGTGAAGCTGAGAGCAGGTACCAAGAATACAAGACATCATACATTACTTCTCAGAAACAGGATTATTTTGATCACCATAAGAATGAAGATCGTTTGAAAGACATGTACCACCCAACAAACTTATTATCTGTTATTGAAAGGCGGAATGAACTTTGCAAGGCTGCAGCGAAGAATTTGATTCTTGATTTGCGGAGTGGAACTTTGGACCTTGGTCCTGGAATGACTGCTGGTACAGCAAGTAAATCAGGAAATGACAGTGATGGAATCCCTGCAGATGATGAAGATTATCACAACAAGAGAAGAAGGCATCACAGAGGTCCCCTGGAAGAAACTGAACTAGTTTCAGTTGCTCCTAAAGCTCACCCAGTCAGTTCGCATTATCGACGAATTCAAACTGACATACATCAAACTCTAGCCTTAGTGAAGAAGCTTGATGAAGAGAAGGGTATTGTGGGAAACATCCTGACAACTGGTGATCACACAAAGTCAAATGGTGACAAATCATATGCTGGATCTACAGGGCCTTTAGTTATTGTCCGGGGCTTATCAACTGTTAAGGGCCTTGATGGTTTTGAGCTCCTAGACACTCTCCTTACTTATTTGTGGCATGTCCATGGTATTGATTACTATGGGATGTCTGAGAGTACAAATGCAAAAGGTCTTCGTCATGTGAGAGCTGATACGAAGAATGCCAACATGGACAAAAGCAGCGCTGCTGATTGGGAGAAGAAACTGGATTATTTCTGGCAAGAGAGACTGACGAACGGCAAGGATCCTCTAGTTGCATTGACTGCCAAGGATAAAATTGATGCATCAGCTGATAAAGTTCTAGAATCTTATGTCACAAAGGTTAAGGATGATAACTACGGATGGACATACGGCTGTGGAGCCAAAGGATGTATAAAAGTTTTCCATGCTCCTGACTTTGTTCTCAAACATCTGAACCTCAAGCATCCTGATTTGGTCTCCAAATTGACTTCAAGAGTCCAAGAGGATATCTATTTCCAAAATTATATGAATGATCCAAATGCTCCAGGTGGCACACCAGTTATGCAGCAACAATCACCAGAGCAGCAAGGACCTACACCTTCTGAACTAACGCCTGGTGCTTTTGGCGGGCAGGGTTCCTTCGTTGAAATGCCCACTCCACCAGTACTAATACCTGTGCCTGGTGCTGGTCCATTGGGTCCATTTGTTCCTGCACCTCCAGAGGTAGTCATGCAGATGATGCGACCAGTGATGCCCATGTATCCGCCTCGTCCGCCTAACCCTCGTCGTCTGCGAAGTTACAAAGATCTTGACGCTCCTGATGATGAAGTCACTCTCGTGGACTACAGAAGTTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MADVLLPELRSPPPPPPPPPPTNDDRARAVDLPSPTPECDDRSPRRELGRSPEDHGVPLPPPPPLGSSRPERLASDRPEEGASAAAQPCGGRSESPTARSMWPRRLSPASLPPRGGRRSESPTPRSIWRRLSPSPPPPLPPLPPKRPRLDGRRSPPRGGRFGFEHERGRERSMNTSRRAPDCLDSGCDAPYNGQSNTRRKGLMTYKQFTQKLEDDVSPGEAESRYQEYKTSYITSQKQDYFDHHKNEDRLKDMYHPTNLLSVIERRNELCKAAAKNLILDLRSGTLDLGPGMTAGTASKSGNDSDGIPADDEDYHNKRRRHHRGPLEETELVSVAPKAHPVSSHYRRIQTDIHQTLALVKKLDEEKGIVGNILTTGDHTKSNGDKSYAGSTGPLVIVRGLSTVKGLDGFELLDTLLTYLWHVHGIDYYGMSESTNAKGLRHVRADTKNANMDKSSAADWEKKLDYFWQERLTNGKDPLVALTAKDKIDASADKVLESYVTKVKDDNYGWTYGCGAKGCIKVFHAPDFVLKHLNLKHPDLVSKLTSRVQEDIYFQNYMNDPNAPGGTPVMQQQSPEQQGPTPSELTPGAFGGQGSFVEMPTPPVLIPVPGAGPLGPFVPAPPEVVMQMMRPVMPMYPPRPPNPRRLRSYKDLDAPDDEVTLVDYRSL</aaseq>

Gene Sequence

<dnaseqindica>1..479#592..653#1624..1678#1892..1966#2088..2162#2263..2310#2493..2561#2656..3465#3558..3606#4265..4374#4489..4596#5028..5088#ATGGCGGACGTGCTCCTCCCGGAGCTCCGCTCTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGACAAATGATGATCGCGCGCGGGCGGTGGACCTGCCATCGCCGACTCCGGAGTGTGACGATCGCTCGCCGCGTCGTGAGCTGGGGCGCTCGCCGGAGGATCACGGCGTGCCGCTCCCTCCCCCGCCACCGCTCGGCTCCTCGCGCCCCGAGCGCCTCGCCAGCGATCGTCCGGAGGAGGGCGCCTCCGCCGCCGCGCAGCCGTGTGGCGGAAGGAGTGAGAGCCCCACGGCGAGGTCCATGTGGCCGCGGAGGCTCTCCCCTGCGTCGTTGCCGCCGCGTGGCGGGAGGAGGAGCGAGAGCCCCACGCCGAGGTCCATCTGGCGGCGGCTCTCCCCGTCCCCGCCCCCGCCGCTGCCGCCCTTGCCTCCCAAGCGGCCGCGCTTGGACGGCCGCCGTAGCCCACCGCGCGGCGGGAGGTGAGGCGGAGGGAGGACGTTTTGGTTTACCTTCTCGGCTCTCGTCGGTGTTTGATTTCTCCTGCGAAGATCTCAAGCTAATGTGTGTTCCGCTCGCGCGTGTTTCGTGCAGATTCGGATTCGAGCACGAGCGAGGCAGGGAAAGGAGCATGAACACTTCGCGTCGCGCTCCAGGTGAGCTATACTTGTTGAACATTTTCATCCTGCCCTTCTGGGCGCAGGCATTTCCAACCAAAATCGTGCCCTGCTACAAGTTTGCATAGCATTTCTCAAAGCAGAGTTTCTGGTTGTTACTTTGGGATTGGGAAGGGATTTCTCGAGCACTTACACAGATGGAAACTGATCAGTATGGTTTGAGGTCTCCTTCATCCTGGATTCCTGGTAGCTCAAAATCTCTGGGCTTGCTTGGAGGCCAATGTGAGAATTTTTTTTCTCATTCCATCAAAACAAATATACTCTGTGTACTTCAGTAGTTCTCATGGTGAAATGGTGAGTGTAATTCGTCAGTTAGTGCTTTGGCACGCTTTTCGAGAACGAGGAGCCTGGGACATTAAGCACTTACTAGGTGTCTTGTACTCTTGTGTGATTTCATAATACTCACCTCGGCTGTCAACTCAATGCTATCAGAATTGCAGCATGCATCTTTGTATTAGTGAAAAATTTCTGATGTCCTCAGTTTTAAAAAAGAACTATGCCATCAATCAACACTAATTTTATTGGCACACTAGTAGGTGATTATCTTGTTGAGTTACCTATACACTTTGATAAATAGGAGTTGGCTTCAATACTTGTAAATTTACTTGAGAATAAGAGAGCTAGTGGATTGCTATCAACATCGTGCATGTTTCTTGTTGGCTTACCTCTAGTCACAATTGAAGTTCTTAGTATGAAGCATTTTGACATCGATCTATTATTTATGATTAACCTACTTCTGCAGTATTAGATAAAAAGTTAACATTAATACTCTCTCTCTCTCCCCCTCTCTTCATTAGTAAACCTTATTGGTTATGTGCATGAGGACATAGGCCGGAGATATAAACAATTTCAATGATCTAATAATAATTCATGGTCCTTCATGTGAGTATGTCTTGTAAGAACAACGATTCACTGCTAGAAGTCTTAACACTTATTGCTTTTCTTCTAGATTGCCTGGATTCTGGATGTGATGCCCCCTATAATGGTCAAAGTAACACCCGGAGGTATGTATATGATTGCCCTATCATGGTGGTAGTTTTGATCTGTTAGGTATGTTGATATTGCTATTACTTCCAAGTAATTCGCTAGTGTGGTGTTGCATTTTGTTGAACTTTTCCTTCCTTTTTGTCTTTTTTTCCGTTTTAAATCCCTCATATATTGTTGAGTGGATGGAGTGCCAATTGTATGAGATCTTATGTGATTCCAAATCATTTCAGGAAAGGATTGATGACATACAAACAGTTTACCCAAAAACTTGAAGATGATGTTTCACCGGGTGAAGCTGAGAGCAGGTATTTATTAACAAAAAGTTACACAACATTCCAGAACTTGAATTAATCTGTTGTACTAGATTGCACTTAAAGTTCAGTGAGCTATTTGTCTAAGTACACTGTTATCAACTTGGTTAACAAGGTACCAAGAATACAAGACATCATACATTACTTCTCAGAAACAGGATTATTTTGATCACCATAAGAATGAAGATCGGTATGTTCAAAATGCGCTTCCTTTCCTTCTGGTGGTGTTAATTGTACTTTGTTAAGTAAATTGGTATTGCAGGTTCATTTCTTTGTTTTTGTAATTGCAGTTTGAAAGACATGTACCACCCAACAAACTTATTATCTGTTATTGAAAGGTAATAATAAGTTTGCTTAAAGCTTCACTCAGAAGTTTACCTGCTGTCAGAAATTTCGTATTTGAATTCGTATTGAGCAGCATTCATAAACCGAACAGCGCTTTTTTATGTGCGCTATTCATTTCGCTCAGAAAAGGTTGTGTTGCTCGTTGGTTTCTTATTTCTGTTTTTATTTCACTCAGGCGGAATGAACTTTGCAAGGCTGCAGCGAAGAATTTGATTCTTGATTTGCGGAGTGGAACTTTGGACCTGTGAGATGAATCTATGTATCATTTATGTTGTGAATGATTAATCCTATGGTATTTCAAGTTGGTTTTGCTGATATCTTGATTTTCATTGGCATAGTGGTCCTGGAATGACTGCTGGTACAGCAAGTAAATCAGGAAATGACAGTGATGGAATCCCTGCAGATGATGAAGATTATCACAACAAGAGAAGAAGGCATCACAGAGGTCCCCTGGAAGAAACTGAACTAGTTTCAGTTGCTCCTAAAGCTCACCCAGTCAGTTCGCATTATCGACGAATTCAAACTGACATACATCAAACTCTAGCCTTAGTGAAGAAGCTTGATGAAGAGAAGGGTATTGTGGGAAACATCCTGACAACTGGTGATCACACAAAGTCAAATGGTGACAAATCATATGCTGGATCTACAGGGCCTTTAGTTATTGTCCGGGGCTTATCAACTGTTAAGGGCCTTGATGGTTTTGAGCTCCTAGACACTCTCCTTACTTATTTGTGGCATGTCCATGGTATTGATTACTATGGGATGTCTGAGAGTACAAATGCAAAAGGTCTTCGTCATGTGAGAGCTGATACGAAGAATGCCAACATGGACAAAAGCAGCGCTGCTGATTGGGAGAAGAAACTGGATTATTTCTGGCAAGAGAGACTGACGAACGGCAAGGATCCTCTAGTTGCATTGACTGCCAAGGATAAAATTGATGCATCAGCTGATAAAGTTCTAGAATCTTATGTCACAAAGGTTAAGGATGATAACTACGGATGGACATACGGCTGTGGAGCCAAAGGATGTATAAAAGTTTTCCATGCTCCTGACTTTGTTCTCAAACATCTGAACCTCAAGCATCCTGATTTGGTCTCCAAATTGACTTCAAGAGTCCAAGAGGATATCTATTTCCAAAATTATATGAAGTATGTATTTAGATCTCCAAATGCAAATGACAAATTGTTATTTCCGACATGTCAAAAGGTAATGCTTCTGTTGTTGTTTACTTTTGATGCAGTGATCCAAATGCTCCAGGTGGCACACCAGTTATGCAGCAACAATCACCAGTAAGAAACTATACACTGTTTAGCTTGTTCCTTTTCACTGATATGCTTAAGAACATTCCCTTCTTGTTTGTATGGTGGGGTGAGAAAAGCTATAATACTATTCTTAATTAACTCTGAAACTAAACTAATTTATCTGAACTGTTTCTCGGTCTTAGAAGGTTTACATTGCACCGATTGTTAATTTCTTCCGCAATTTCCCCCTTTGAGATGCTTATTTTCATTTTTTAGTTGTTTGTGCTTATCATAAAAACAGTTTATTTCTTTAGGAGTTTGTGAAATGTTTTTCCATGTCCCATGTTTGACTAACAGATCAATAGAAATTCAATCCATAATTTGTTGTGTTCACCTGTCACTAGTGAAGCTCTATGTTGTAGATCTTTCACCTTATTTCCACATTAATGAGTAATCGATGACAATATTTTACTTCTTGTAATATTTATGTATGTGAAGTCTCTGATGTTTGATACTGTTCGTTCTTCATCATAATCCATGTAACTTCTCTAGTGTTGAATGTTCTTAATTTTGCATTTCAAGTATATTTGCTGGGGGATATTAAACGTGCAGTGTATCACTTGAAACTTGAAAGTGTTGTGTATTAGTTATTGAAATCCTAAACCTGCAGTATAATCCTTATTTATAAGCCCGTTCTGGTTTGCAGGAGCAGCAAGGACCTACACCTTCTGAACTAACGCCTGGTGCTTTTGGCGGGCAGGGTTCCTTCGTTGAAATGCCCACTCCACCAGTACTAATACCTGTGCCTGGTGCTGGGTAGGTTAATTATGTTATGCCAGTTAGCTAAACAATTAAGTACTCTACAAAAAGGAAAAACAAGTCAGTTATCAAGTCCAGGCACAATTCTAACTATGGTTGTCTTGGTTTCAGTCCATTGGGTCCATTTGTTCCTGCACCTCCAGAGGTAGTCATGCAGATGATGCGACCAGTGATGCCCATGTATCCGCCTCGTCCGCCTAACCCTCGTCGTCTGCGAAGGTCAGTACTGATCAACTAAAGTTTGATTAATTTCCCCCTAAAGAACACTAAGCTTAATACTTTGATAAAAAAAAATTGCCGGGTCCGCGGAAGGACGCCGACCTACTTTGATAAAATTTGGTATACGTTAGGAAATGAAAATCCGTTAACAACAACATGGTTAGTTTTTGCACTTTCGAAATGATTTGCTAAATACGATCCCAATGACTATGCAATGCTCCTTCCTCTCTTGTCCTTGCCTGTTTCTGCACTGGTTTACTGCCCTACTATACTTTCTACTTTGTGCCAGCTTCTCTTGTGATCTTGTCCTATTGCATTTGATTGTGGAAGCAGAAAACATGATACACCTTTGAGTCGAACATATGGATATGCTTCGCTGTAGTTTCTGTTGCCTAACTCTCTAAAATTTAAATTCATGATGTTGGATGCAGTTACAAAGATCTTGACGCTCCTGATGATGAAGTCACTCTCGTGGACTACAGAAGTTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007545

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA007545&oldid=61097"