Os12g0568900

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0568900| Description = Thaumatin, pathogenesis-related family protein| Version = NM_001073601.1 GI:115489163 GeneID:4352567| Length = 1026 ...")
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Gene Name

Os12g0568900

Description

Thaumatin, pathogenesis-related family protein

Version

NM_001073601.1 GI:115489163 GeneID:4352567

Length

1026 bp

Definition

Oryza sativa Japonica Group Os12g0568900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23613759..23614784

Sequence Coding Region

23613797..23614489

Expression

GEO Profiles:Os12g0568900

Genome Context

<gbrowseImage1> name=NC_008405:23613759..23614784 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23613759..23614784 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagcgccctcgccttcgtcgccgtcctcctcgccgccgccgccgcggcgacctcgccggcggcggtggcggccaccacgctgaccatccagaacctgtgcccgcacccggtgtggccgctcgtcacccccacctccggccaacccatctccgacaacaccgcgcgcctcgaccccaactccctcatctccctcgccttcccgcccacgccgtggtccggccgcgtcgccgcgcgcaccggctgcgacgcggcggcgtcgccgccggccgggtgcgagaccggcgcctcgccgccgtccaccgtggcgcagctgagcgtccacggcggcggcgacgtcgcgacgtacagcgtcagcctcgtggacggcttcaacgtgcccgtggtcgtcagcccgcaggccgtcggcggcggccagtgccccgccctcggctgcgtcgtcgacctcaactgcgactgcccgctggggcagcggttctccgacggcgccgcctgccgcggcccgccggagtacttcaagggccggtgcccgcagacgaggacgacgccgggcgacgtcgagcccgtgccgcagagctgccgctcccccggcgagctcaaggtcatcttctgcccgcccaccatgctcaccgccgccgccgccgccgccgccagcgacatgctcatccgtaccgtcgtcgcctccagctag</cdnaseq>

Protein Sequence

<aaseq>MASALAFVAVLLAAAAAATSPAAVAATTLTIQNLCPHPVWPLVT PTSGQPISDNTARLDPNSLISLAFPPTPWSGRVAARTGCDAAASPPAGCETGASPPST VAQLSVHGGGDVATYSVSLVDGFNVPVVVSPQAVGGGQCPALGCVVDLNCDCPLGQRF SDGAACRGPPEYFKGRCPQTRTTPGDVEPVPQSCRSPGELKVIFCPPTMLTAAAAAAA SDMLIRTVVASS</aaseq>

Gene Sequence

<dnaseqindica>39..731#acacactccaagcaagaactcagcttagctagctagcaatggccagcgccctcgccttcgtcgccgtcctcctcgccgccgccgccgcggcgacctcgccggcggcggtggcggccaccacgctgaccatccagaacctgtgcccgcacccggtgtggccgctcgtcacccccacctccggccaacccatctccgacaacaccgcgcgcctcgaccccaactccctcatctccctcgccttcccgcccacgccgtggtccggccgcgtcgccgcgcgcaccggctgcgacgcggcggcgtcgccgccggccgggtgcgagaccggcgcctcgccgccgtccaccgtggcgcagctgagcgtccacggcggcggcgacgtcgcgacgtacagcgtcagcctcgtggacggcttcaacgtgcccgtggtcgtcagcccgcaggccgtcggcggcggccagtgccccgccctcggctgcgtcgtcgacctcaactgcgactgcccgctggggcagcggttctccgacggcgccgcctgccgcggcccgccggagtacttcaagggccggtgcccgcagacgaggacgacgccgggcgacgtcgagcccgtgccgcagagctgccgctcccccggcgagctcaaggtcatcttctgcccgcccaccatgctcaccgccgccgccgccgccgccgccagcgacatgctcatccgtaccgtcgtcgcctccagctagatcgctcgcttcgccggcgagacgacggcgagaagagaaatcccgtgcctaatgctgacgcatgcatgggcttaataataaattaattaatcaattaagctgtggctttgagcatgttaattactacttaattaatcttaattagcatcgatctgtggctgtggagatgtaattagctcgagctttggcttggagcatacttggtgttcgtctgtgttgtttttcgatgtgctacgccattagcaatggctagcaaaaaataatcaatcagtatgaaatttctcgtgttgtgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0568900, RefSeq:Os12g0568900