BGIOSGA007557

From RiceWiki
Revision as of 03:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007557| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007557, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007557

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007557, complete gene.

LocusTag

OSJNBA0050G13.32

Ensembl Transcript ID

BGIOSGA007557-TA

Ensembl Protein ID

BGIOSGA007557-PA

Length

4120

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3341959..3346078

Sequence Coding Region

3341959..3342256,3342661..3342782,3343039..3343160,3343290..3343471,3343566..3343611
,3343743..3343821,3343910..3343987,3344096..3344680,3345127..3345867
,3346004..3346078

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3341959..3346078 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3341959..3346078 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTACCCCACGTTCCACGTCCACCCGCCGTTCCCGGTGTCGGCGAGGAAGAAGGAGGATGACGGCGGCGGCGGCGGCGGCAAGAAGGAGGCGGCGGCCGCCGCGATGAGGCGGCTGGCGGAGATGGACCACCGCGCGGCAGCCGACGGCGGGAAGGTGGTGGCGGCCGTGGCCGTCGACGGCGACAGGGGCAGCCAGCACGCGCTCAAGTGGGCGGCCGACCACGTCCTCTCGCTCTCCCACCCCTTCTTCCTCCTCCACGTCCGCCGCAAGCACGCCTCCCTCCACTCCGCCGGGGGAAAGCAATTCTCCCTATTGCACGTGCAGGATGATGTTGCAGCTTCTTCTCCTGATCAAATGGATCATCACACCAAAGATCTGCTGCTCCCATTCCAGTGCTTCTGCAGCAGACGAGGGTTACAATGCAGGGAAACCATTCTTGATGGAACTGATGTGTGGAAAGTTATTATAGATTTTGTCCTTGACCATAAAGTTGACAAATTAGTACTGGGGGCATCATCTAGGAATGCATTTACAAGGACAATATGGAAGTTGGATGTGCCAACATGTGTCACAAAATCTGCACCAAATTTCTGTTCAGTGTATGTTATATCCAAAGGGAAACTATCTTCATTCAGGCTTGCCACCCATGCAAATGCAAATGATACCAGCAAAGAAGAGCTGGAGAATATATCTGAAAATCGGCCGCTAATTGCAAAAAGTGAACCAGCACCAATAATACATATTGAAGGGCAAAATTCATCTAGTGCACTTTGTCCTGGCTGCAACCCTTTATCTCCAAACCTGAGTGAAGAATGTACTGAATCAACTTCTAAATACTACCCAGAAGATTTGGAGGCTGAAATAAGGAAGTTAAAGCTTGAGCTGAAACAGAAAAATGACGATATGCACATGTGGAACAAGTTACCTCTTGGGATCGGAGACAGGAGTGAAAACTCAAATGCAAGTGTTGAACATGAGGATGAACATTTACAAGAATTCACGACATGTTCAACCCATTCCTACAGTGAGAGACCAAATGCAGAACCGAGTTCCGCAGTTCGTGGCCCAAAGCATAAGCTCTTGAAACTCGAAACTTCCTCTTCTGATCAATGCAGAGAGAGAACCATACAGGAATTTAAAGACCATAGTTCCCAGGATACGGTGCATCCGATCTTAAGACGTTTGCCGCCCAAATTTTACTCGCCTAGAAATGATTCTAAGCATGGATGTGCTTCTGAAAAGGCTTACAACCTTGAACTGAAGTGTAAATCTTTGCCAAGGCCAATTGAGACGAAAAGACTACTGGAGGGTCTTCCAACTAGATTCCAATGCAAAATATACACAACAGAAGAGGTTGCAAATGCCACCGATCATTTCTCACCGGAACTGAAGGTAGGGGAAGGAGGTTATGGACCAGTCTATAAAGCTACACTTGACAATACTCTTGTTGCTGCCAAGATTCTCCATTCTAACATAACTCAAGGACTGAAACAGTTTCAACAGGAGGTTGAGTTGTTGAACAACATTCGCCACCCGAATATGGTGCATCTGTTGGGTGCTTGCCCTGAGTATGGCTGTCTGGTGTATGAATACATGCCGAATGGCAGCCTCGAGGACCGTCTCTTCTGCCGGTCAGGCACCCCACCGCTGCCATGGCAGCTCCGTTTCAAGATGGCAGTGGAGATAGCCACTGGCTTGCTCTATCTACACAAGATGAAACCTGAAGCCTTTGTCCACCGTGATCTCAAGCCTGGAAACATCCTCCTTGACAAAGATTTCGTTAGCAAGATCAGCGATGTCGGCCTCGCTCGCATCATTCCCCGGTCGATGGATGAGACGGTCACGCAGTACCGGATGACAGATGCTGCAGGGACCTTCTGCTACATCGATCCTGAGTACCAGAAGACTGGATTGGTCACCACGAAATCCGATGTTTATGCGCTCGGCATCATCTATCTTCAGATGATCACTGCAAAAGATGCAATGGGGCTTGCTTACATGGTCTCTGATGCACTGGAGGAAGGAACATTTGAGGGGCTCTTGGATCCTAATGTCACCGGCTGGCCTGTGCAGGAAGCTCAGAAGTTTGCTGAGCTTTCACTGAAATGCTGTGAACTCCGGCACAGAGACCGTCCTGACTTGGAATCCGTCGTGCTCCCTGAGCTGATCCGTCTTCACACATTCGTTGCATCATCTGGAGATAATTCTTCCATCGACCAAGGCCACCAGCGTTCAGTCAGCGACAAGGAGTTGGCTCTGGAAAATGACTTGGCCGAGATTCTGAACGATGGGCTAGTGAAGGGGGCGTCATTTGCAGCATAA</cdnaseq>

Protein Sequence

<aaseq>MSYPTFHVHPPFPVSARKKEDDGGGGGGKKEAAAAAMRRLAEMDHRAAADGGKVVAAVAVDGDRGSQHALKWAADHVLSLSHPFFLLHVRRKHASLHSAGGKQFSLLHVQDDVAASSPDQMDHHTKDLLLPFQCFCSRRGLQCRETILDGTDVWKVIIDFVLDHKVDKLVLGASSRNAFTRTIWKLDVPTCVTKSAPNFCSVYVISKGKLSSFRLATHANANDTSKEELENISENRPLIAKSEPAPIIHIEGQNSSSALCPGCNPLSPNLSEECTESTSKYYPEDLEAEIRKLKLELKQKNDDMHMWNKLPLGIGDRSENSNASVEHEDEHLQEFTTCSTHSYSERPNAEPSSAVRGPKHKLLKLETSSSDQCRERTIQEFKDHSSQDTVHPILRRLPPKFYSPRNDSKHGCASEKAYNLELKCKSLPRPIETKRLLEGLPTRFQCKIYTTEEVANATDHFSPELKVGEGGYGPVYKATLDNTLVAAKILHSNITQGLKQFQQEVELLNNIRHPNMVHLLGACPEYGCLVYEYMPNGSLEDRLFCRSGTPPLPWQLRFKMAVEIATGLLYLHKMKPEAFVHRDLKPGNILLDKDFVSKISDVGLARIIPRSMDETVTQYRMTDAAGTFCYIDPEYQKTGLVTTKSDVYALGIIYLQMITAKDAMGLAYMVSDALEEGTFEGLLDPNVTGWPVQEAQKFAELSLKCCELRHRDRPDLESVVLPELIRLHTFVASSGDNSSIDQGHQRSVSDKELALENDLAEILNDGLVKGASFAA</aaseq>

Gene Sequence

<dnaseqindica>1..298#703..824#1081..1202#1332..1513#1608..1653#1785..1863#1952..2029#2138..2722#3169..3909#4046..4120#ATGTCGTACCCCACGTTCCACGTCCACCCGCCGTTCCCGGTGTCGGCGAGGAAGAAGGAGGATGACGGCGGCGGCGGCGGCGGCAAGAAGGAGGCGGCGGCCGCCGCGATGAGGCGGCTGGCGGAGATGGACCACCGCGCGGCAGCCGACGGCGGGAAGGTGGTGGCGGCCGTGGCCGTCGACGGCGACAGGGGCAGCCAGCACGCGCTCAAGTGGGCGGCCGACCACGTCCTCTCGCTCTCCCACCCCTTCTTCCTCCTCCACGTCCGCCGCAAGCACGCCTCCCTCCACTCCGCCGGTACGATCCTCCTCCCCCCTCAGCTCACCCATCTCAACCCTAGAAATTGATCTTGACGTGATCTTGATCTCCTTTGGGATCCCGGCACGGAAAACGGAGAGATGGATTAGCGCACGATTAATGAAGTATTGGGTTATTGGCTAATAAACTTGAAAAAATGATTGACATGATTGATATGATAGATAATTTTTGCAAAAATACGTATCGTTCAGTATTCGGAAATCGTGCGCGTAGAAAACTAGTGAGTAGAGGTTGGAAAAGGGGAGAAAAGAACCCACCTTAATCTGTCTCATTTGATGTGCATCCAAGTTGCGGTGCTGTTCATGTGATGTGCATTGATGAATTGTGAATTTTGCATTGTATTGTTAGAGTTTATAAATTTTCCAAGTTTTTCATTTATGCAGGGGGAAAGCAATTCTCCCTATTGCACGTGCAGGATGATGTTGCAGCTTCTTCTCCTGATCAAATGGATCATCACACCAAAGATCTGCTGCTCCCATTCCAGTGCTTCTGCAGCAGACGAGGGGTATGCATCCATTTTTCCTACCTCTACCTTGTCACGCAGAGATTATGTTCATTTTGGCGGAATCTAAAATCTATGGAGATATAGAGAGTTTCTGAAAACTACAGACTGGAATGCTCATGTTGGCATGGACCTGAAATCGATCATTCATGTGGCTTTTCATATAATCTATTAAGATTTTGCTTTCCTTTGTTTGACCTGATGATAGCATGAGCAAAATCATGACCCTTTTTTGGCTGACTTGCTTTAATATCTACAGTTACAATGCAGGGAAACCATTCTTGATGGAACTGATGTGTGGAAAGTTATTATAGATTTTGTCCTTGACCATAAAGTTGACAAATTAGTACTGGGGGCATCATCTAGGAATGCATTTACAAGGTGCCGTATTATTTTACAACCATTAAGTCAAAGAAAATTGCAACCATTTCTATTTACAGTTTATTTTCTGAATTGTTTTAATACTTCTCTTTTGATTGCTATATTGATCTCAGTTCTTAACTAGTGCAGGACAATATGGAAGTTGGATGTGCCAACATGTGTCACAAAATCTGCACCAAATTTCTGTTCAGTGTATGTTATATCCAAAGGGAAACTATCTTCATTCAGGCTTGCCACCCATGCAAATGCAAATGATACCAGCAAAGAAGAGCTGGAGAATATATCTGAAAATCGGCCGCTAATTGCAAAAAGTTTGTGTTACTCTAATGCTAATTCCCTTTAGATGATATTCACTCTAGTATACTTGTGAGTTGTATGTTCATTAGGTGCATGTGGAATTTGCAGGTGAACCAGCACCAATAATACATATTGAAGGGCAAAATTCATCTAGGTGAGCTTTGCATCCTCTCTCTATATATATGCTAACATAAATTCCTTGATGTTTTCATGGATACATCAAATATGTGCCCTTCTCATACAAACTACCCAGGTTTTGATAAATGAGTTTTTTTTTTATGATAGTGCACTTTGTCCTGGCTGCAACCCTTTATCTCCAAACCTGAGTGAAGAATGTACTGAATCAACTTCTAAATACTACCCAGTATGCTTTTGATATTTTCCCCTACTCTTTGTTATTTTGGTTTTGTCACTTGCAGAAATATAACTATTAGACCAACTGCTTTTTGCAGGAAGATTTGGAGGCTGAAATAAGGAAGTTAAAGCTTGAGCTGAAACAGAAAAATGACGATATGCACATGTGGAACAAGGTAATTGTGATACCTTGTGCTGTGTTGCTTATTGTTTATCTCATAAAGTTACTTGTCTCTAATCCCATATTCTGAAAGTATGAATTCTAATGGAAATTTGGACTGCAGTTACCTCTTGGGATCGGAGACAGGAGTGAAAACTCAAATGCAAGTGTTGAACATGAGGATGAACATTTACAAGAATTCACGACATGTTCAACCCATTCCTACAGTGAGAGACCAAATGCAGAACCGAGTTCCGCAGTTCGTGGCCCAAAGCATAAGCTCTTGAAACTCGAAACTTCCTCTTCTGATCAATGCAGAGAGAGAACCATACAGGAATTTAAAGACCATAGTTCCCAGGATACGGTGCATCCGATCTTAAGACGTTTGCCGCCCAAATTTTACTCGCCTAGAAATGATTCTAAGCATGGATGTGCTTCTGAAAAGGCTTACAACCTTGAACTGAAGTGTAAATCTTTGCCAAGGCCAATTGAGACGAAAAGACTACTGGAGGGTCTTCCAACTAGATTCCAATGCAAAATATACACAACAGAAGAGGTTGCAAATGCCACCGATCATTTCTCACCGGAACTGAAGGTAGGGGAAGGAGGTTATGGACCAGTCTATAAAGCTACACTTGACAATACTCTTGTTGCTGCCAAGATTCTCCATTCTAACATAACTCAAGGACTGAAACAGTTTCAACAGGAGGTATGTCCATGGCCAATTTTGTTTGACACAAGTATCCCACCACCACAATCTCTTTAATTTCCAATCAAATGAGAGTGATGTTGGGAACTTGGGATAGATACTGACAGTAAAATGTTTTCAGAGCAGCACAATCATATTATCATTTGATTTTGGTAATATTGTCACTATAGATAGCCAGATACTTCTGTTAAGTCAAAATCATGTAGACAATGATGTGTTTACGTGAAAATTTCAAATTTCATTCACAAAAATGAAAAACTCAACATTCAGTAATATGAAATCATAGAGACTATTGTGGTGCATCCAAAAATGAAAAGGGAAGGGAATCATATGATTTACTTTTAGTCCTTTGCTAAAAAGAAAAACATCATGCATCAGTTTCAGCTATATATAAATGATATATCTGTAAACCATGATGGTAAGAATTTAAATTGTGTTATCAACAGGTTGAGTTGTTGAACAACATTCGCCACCCGAATATGGTGCATCTGTTGGGTGCTTGCCCTGAGTATGGCTGTCTGGTGTATGAATACATGCCGAATGGCAGCCTCGAGGACCGTCTCTTCTGCCGGTCAGGCACCCCACCGCTGCCATGGCAGCTCCGTTTCAAGATGGCAGTGGAGATAGCCACTGGCTTGCTCTATCTACACAAGATGAAACCTGAAGCCTTTGTCCACCGTGATCTCAAGCCTGGAAACATCCTCCTTGACAAAGATTTCGTTAGCAAGATCAGCGATGTCGGCCTCGCTCGCATCATTCCCCGGTCGATGGATGAGACGGTCACGCAGTACCGGATGACAGATGCTGCAGGGACCTTCTGCTACATCGATCCTGAGTACCAGAAGACTGGATTGGTCACCACGAAATCCGATGTTTATGCGCTCGGCATCATCTATCTTCAGATGATCACTGCAAAAGATGCAATGGGGCTTGCTTACATGGTCTCTGATGCACTGGAGGAAGGAACATTTGAGGGGCTCTTGGATCCTAATGTCACCGGCTGGCCTGTGCAGGAAGCTCAGAAGTTTGCTGAGCTTTCACTGAAATGCTGTGAACTCCGGCACAGAGACCGTCCTGACTTGGAATCCGTCGTGCTCCCTGAGCTGATCCGTCTTCACACATTCGTTGCATCATCTGGAGATAATTCTTCCATCGACCAAGGCCACCAGCGTTCAGTCAGCGACAAGGTAAAACAAAAAAAAGGAACCATCTTTTCTCTGCAAATTCTCAAATGAAGGCATCAGGATATCTCCAATATGTGTTCTGAACTTCTGAAGTTATGGGTGTTTCATCTAGACTAATATTGTTCTACTCTAAATGCAGGAGTTGGCTCTGGAAAATGACTTGGCCGAGATTCTGAACGATGGGCTAGTGAAGGGGGCGTCATTTGCAGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007557

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA007557&oldid=61109"