BGIOSGA007567

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Revision as of 03:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007567| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007567, complete gene.| tag = P0419H0...")
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Gene Name

BGIOSGA007567

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007567, complete gene.

LocusTag

P0419H03.3

Ensembl Transcript ID

BGIOSGA007567-TA

Ensembl Protein ID

BGIOSGA007567-PA

Length

5477

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3662896..3668372

Sequence Coding Region

3662896..3663333,3663575..3663609,3663788..3663873,3664196..3664334,3664679..3664724
,3667036..3667248,3667386..3668372

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3662896..3668372 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3662896..3668372 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCGCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCACCCAGATGGACCTCGAGGACCAGGCTTCTATACATCTACAGGTTTCTGTAATTGATAGAAAAGTGCTCCCATCTGAATTTCATTTGTTCAGTGATATATTTGTGTGTGCAATATTTGGAAAACTGCCAATAGCATCATCATCAGCTGACGATCATGGGGGAGACTGCAACCCCAGCGAGGCAGGAGGATGTTGTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGATAGCCAAGCTCAAGAATATAGTAGTTCTTGATCTTGGATCGAACAATTTCATCGGCGATATTCCGGGTAGCATAGGTCAGCTTAAGAGATTGGAGGAGCTCCATTTGGACTACAACAGGATGTCCGGGGAATTGCCATCAGCTCTAGGGAACTGTACAAATCTCAAGATCATCAACCTCAAGTACAACAGCTTCAGAGGAGAGCTTCTGAAGTTGTCACCAAGAATTGGCAACCTGAAATCCCTCTTGTTCCTATCACTTTCCAACAATGCTTTTGTGAATATTGCAAATGTGATTCATGCACTCAAGAACTCCAGGAAAATCAACACTTTGATCATAGGAACCAACTTCAAGGGTGAGACCATGCCAGAGGATATACCAATCACTGATGGTTTTCAGAGTCTTCAGGTTCTTTCCATACCATCTTGCTCATTGTCTGGAAAAATTCCTCTTTGGCTATCAAAATTGGCCAAGCTGGAAGTTCTGGATCTGTCCAACAATCAACTCACTGGACCAATACCAGACTGGATCCATGACCTGAACTTCCTCTACTTCATAGATATATCAAACAACAAACTTACAGGGGATCTCCCAACGGCAATAATGTTGATGCCAATGCTTCAACCTGACAAGGTTGCAACCCAATTGGATCCCAGGGCATTTGAACAGCCTGTCTATGCAGGGCCATCACTTACATATGGCAAGAACAATGCTCTCCCTGCAATGCTGAATCTTGCAAACAACGAGCTTACCGGTGCGATCCCTTCAGAGGTTGGTCAGCTGAAATCACTCACATTGCTCAACTTGAGCTTCAACAGCTTGTCAGGACAGATTCCACAGCAACTTTTCGACCTGACAAACCTGCAGGTGGTAGACTTGTCCAACAACCATCTCTCAGGTTCAATTCCACCGGGGCTGAATAACCTGCACTTCCTTACAACATTTGATGCTTCTAACAACGACTTAGAGGGGTGGATTCCAGCTGGTGTCCAGTCTTCATATCCGTATGATTTTTCTGGCAACCCAAAGCTGTGTGATCCTACACTCACTCGCACCTGTGATTCAGCAGAGGCACCTCCAGTCTCCACGCTCACCGGAGAAGAAACCACTCCAAAGATCGTCTTTGCAATCGCTTTCGGTGCGTTCTTCTGTTTAGGTGTGGTGTATGATCAGGCAGTATTATCGAGGTTTTTTGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MPDLGGDGDEVEKAPTLSPAAVACARGWMRRRATATDCGNGERRARQGCPPLESGDDGRPPPGSSGGGRPSPDLGRIHRRRWEESSVRQATLQSSPPLPPPASSCPLPSSWLSSTSSPRGRRRPPMDVDSDLADKGKPTQMDLEDQASIHLQVSVIDRKVLPSEFHLFSDIFVCAIFGKLPIASSSADDHGGDCNPSEAGGCCPGGGSRLVDSIDHTWAEEAVDSMMGLLAASSLGGAFSWGVLLPAMIAKLKNIVVLDLGSNNFIGDIPGSIGQLKRLEELHLDYNRMSGELPSALGNCTNLKIINLKYNSFRGELLKLSPRIGNLKSLLFLSLSNNAFVNIANVIHALKNSRKINTLIIGTNFKGETMPEDIPITDGFQSLQVLSIPSCSLSGKIPLWLSKLAKLEVLDLSNNQLTGPIPDWIHDLNFLYFIDISNNKLTGDLPTAIMLMPMLQPDKVATQLDPRAFEQPVYAGPSLTYGKNNALPAMLNLANNELTGAIPSEVGQLKSLTLLNLSFNSLSGQIPQQLFDLTNLQVVDLSNNHLSGSIPPGLNNLHFLTTFDASNNDLEGWIPAGVQSSYPYDFSGNPKLCDPTLTRTCDSAEAPPVSTLTGEETTPKIVFAIAFGAFFCLGVVYDQAVLSRFFG</aaseq>

Gene Sequence

<dnaseqindica>1..438#680..714#893..978#1301..1439#1784..1829#4141..4353#4491..5477#ATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCGCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCACCCAGATGGACCTCGAGGACCAGGTACGCCGAAGCCGCTCGACTCGTCCCCACAGGAATTCTTCTTTCAGTTTTTTATTGTGACTGCCTAAGCTTGGAGAGCATCTCAATTTCCGTTGAAACACTTCAGGGAAGCATTTAGCTCTGAGATTTCATGAGACTTCCATCTATTATCCTACCAAACTTCTGGCTGGTTCGTTAGTTCTATGTGATCTGGATTTGGTTTGTGTAACACTAACATCCATTGATATTCTGAATTTTTCAGGCTTCTATACATCTACAGGTTTCTGTAATTGATAGGTTAACAAGCTTTTCTAATTTATTTATTTTTTGGTGATTGTTGCTTTTGCTGGATCAAGCATCATGAGTGAATAGTCCTGATAGCCGAGTTTTTTTTTTTTGCAACGCATGAAGAACCATATGCTCTCATTTTAATTTTCATTTGTTCAGTCATGAATTGTTTGTGCAATATATTCAGAAAAGTGCTCCCATCTGAATTTCATTTGTTCAGTGATATATTTGTGTGTGCAATATTTGGAAAACTGCCAATAGCATCATCATCAGGTTCTCTGATATTTTTTATAAATGAAAACTCTAGAAGCTTGATTCAATAGCAGTTCACTGAAATTTTGTGGTTCAACAGAGCATATCAATTGATTTTCTCTGAACTGCTCTCTACATATGATCCTTTTGATCATAGTTTTTCGCTGAATATTTTGGTTGAACAAAGCAGTTGTAGTCCCCTATGAGCTTTTTTCTGCTGTAGATGTAGTTCATGTTCTGATTTTTTTTTGTTGATGAACAGATTTCTCAATTTTGGTCTACTTGATTTTTCATCCATAGACTACAGGAATGCTCTGAATTTGTGGAGTTTTCTGCACCTCAGCTGACGATCATGGGGGAGACTGCAACCCCAGCGAGGCAGGAGGATGTTGTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGGTTCGTTGGGTTGCAGCTGAGCTATGCATTTTTTTAGCTCCTTTTATTTTTCTCAAGCAATTATCTTTGTGGTTCAACAAAGCAGATCGATACATGTTTTCCTCAACTGCTCAATGCATATGGTCCCTTTGATTAGGTTCTTGATTTTCTTGTAAAAATGCGTACAACCTGTCAATCCATTGAATTTTCTGCAATTTTATGGTTCAACAGAGCATATGGATTCATTTTTCTGAAGCACTCACTGCATATGGTCATGTTGATATGGGTCTTGATTTTGTTCTACAATTGTGTAGAATCTGTCGATCCATCGAATTCTTTTTGATACTGCTCTTGATTTTGTACAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGGGATGGAGATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACATTTGCTATATTAGTGCTGGCATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAATAATATGAATCATAATCTTTTACCTTCATTTGTTTTGTCACTAAATACTCCAGCGGCTTTGTGCAATCTGCAATATATTTACTCCAGTATCAGGAGTAACTTATTTTACTAAGAGAAGTCCAATGACGTGCAAATATTAATTTATTTACTAAGAGAAGATTTGCAAACCAATTAGAGTACTAATATACTAAGTAATTTATAATTACTTACTAAGAGAAGAGCTGAGAACGATCTGAGAGTAATTTATTTACTGAAAGGAGGAATCTTCCCAAATAATCTAGGAGTAATTCATTTACTAAGAGAAGAAATCAATTTGGAAGTGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTACCTCTGTTAGCTCTACCTGCATAACCTCTTCCACCTCTGGCTCCACCTCTATCACCACTTCTTCCTCTTCCATAACTAGGCTTGCGAGGAGCACGACAATCACGCATGAGATGCCCCATTTCACCACAATTAAAACACTCTCTAGTCTCTTTACCTTGTAGCATTGCATAGGTGGGACTTGATGAAGGTGGTGTAGCCTTAGGCAATACTTTCCTCTTAAGCTCATCTTGAGCCATAGCTGCTATAGCCTCATCCAAGGTAGGAAGAGTAGTCTGATGGAACATAGCATCTTTTCTCCCTTCAAACTCTGGATTTAGGCCTTTCAAGAATTCAATAACCCTTCTGCGCTCAATCCATTTCCTCATTTTTGCTATACAATCGGGGTGCTCTAACCCAAGAGGATCATAATGATCCAAATCAGACCATAGATGCTTCAATTCTGCAACATATTCTGCAATAGAACGCTCCCCCTGTCTCAAAGCACTTATCTTCTCCCGTGCCTCCACCATTAGCATCACATTTCCTTCTCCTGAGTAGAGATTAGTGAGAGTTTTCCACATCTCACTTGCACTTGAGATGGTCTCAACAGTTGTAGCAATAGCAGGGATAAGTGAAGTCAACAACCATGCTACTACTAAAGAGTTGGTAGTGCTCCAAGTCCTCCATTCTGCACTAGCACTCTCAGGCTCCTTCACTTCTCCGGTGACATATCCTTCTAATCCCTTAGTCTTCAAAATCAACAATGCTCTCCTTGACCAACTTAAATAATTTTTGACACCCTCCAACTTAATATCATTTTGCATCAAGTCAATTTTTTGCATTGTTTCAGTATGAGGAATCACTGCATTACTTGTAGTTGGGGCCTCACTAAATTTCTTTGCAAGCATGTCCACCAATTTACCCATCACTTGTTCAAGTCCCTGATTTTCCCCCATTTTAATCAAGCAGCACTCAACTAACTGCTGTAACAAAGCAAACTCTCCTTGTCTACACTCCACCAGCAGCACTAACAACAAGCCAACAATTCCTCTACCCTGTATTTTCTTCCCAGTAAATCAGTAGTAGCAGCAAGAACAATCTCGATTACCTCAATCTTGAAGAAGAACAACAGTAACAACAGTCACTAGTGCTTCTTCCCTCAACCACAAGCCACAGTACAGAGTCCACCACCAGCCAACAAGCAGAAGCACGGCTGGGAACCAACTCAACAAGCAGAAGCACGGCTGGGGAACCCACTTGTAGCTGCTGCCCCTCCAGACCTCCCTGCTCAGCTCACGCACCTGCTGTGTGTTGCCGTCACCGCCGCTCGCTGCAGCAGCCGCGAGCGTCCTGACCTGCTGCGCCTCCAGTCCACTCCTACTTGTCCCTGCTCACCGTCCTACACCACCACCAAGAACTCCAACCTCAGCGCTTGCTCCCTCAGCTAGGGTTCGTCGCCGCCGGCCGCCAGGAGCACGGCTCTGATACCATGTAGTTTGTGAATTTTTTCTCTGGAAGCTTCACCCCTTCAGTATTGCTATCGTTATTTACATATACATGAGTAGATGGGCCTCTAGCTGATGGGCCAGCACACAAACACACACACACACTATTCTATTTACAGCCCAACAGTAAACAGATAGCCAAGCTCAAGAATATAGTAGTTCTTGATCTTGGATCGAACAATTTCATCGGCGATATTCCGGGTAGCATAGGTCAGCTTAAGAGATTGGAGGAGCTCCATTTGGACTACAACAGGATGTCCGGGGAATTGCCATCAGCTCTAGGGAACTGTACAAATCTCAAGATCATCAACCTCAAGTACAACAGCTTCAGAGGAGAGCTTCTGAAGGTGAACTTCTCCGGACTTCCCAATCTGAAAGTTTTGGATCTTGAGTCAAACAAGTTCAGTGGAGAAATTCCGGAAAGCGTCTACCATGCAGCAATCTGACCTCGCTGAAACTATCTTCAAACAAATTCTATGGACAGTTGTCACCAAGAATTGGCAACCTGAAATCCCTCTTGTTCCTATCACTTTCCAACAATGCTTTTGTGAATATTGCAAATGTGATTCATGCACTCAAGAACTCCAGGAAAATCAACACTTTGATCATAGGAACCAACTTCAAGGGTGAGACCATGCCAGAGGATATACCAATCACTGATGGTTTTCAGAGTCTTCAGGTTCTTTCCATACCATCTTGCTCATTGTCTGGAAAAATTCCTCTTTGGCTATCAAAATTGGCCAAGCTGGAAGTTCTGGATCTGTCCAACAATCAACTCACTGGACCAATACCAGACTGGATCCATGACCTGAACTTCCTCTACTTCATAGATATATCAAACAACAAACTTACAGGGGATCTCCCAACGGCAATAATGTTGATGCCAATGCTTCAACCTGACAAGGTTGCAACCCAATTGGATCCCAGGGCATTTGAACAGCCTGTCTATGCAGGGCCATCACTTACATATGGCAAGAACAATGCTCTCCCTGCAATGCTGAATCTTGCAAACAACGAGCTTACCGGTGCGATCCCTTCAGAGGTTGGTCAGCTGAAATCACTCACATTGCTCAACTTGAGCTTCAACAGCTTGTCAGGACAGATTCCACAGCAACTTTTCGACCTGACAAACCTGCAGGTGGTAGACTTGTCCAACAACCATCTCTCAGGTTCAATTCCACCGGGGCTGAATAACCTGCACTTCCTTACAACATTTGATGCTTCTAACAACGACTTAGAGGGGTGGATTCCAGCTGGTGTCCAGTCTTCATATCCGTATGATTTTTCTGGCAACCCAAAGCTGTGTGATCCTACACTCACTCGCACCTGTGATTCAGCAGAGGCACCTCCAGTCTCCACGCTCACCGGAGAAGAAACCACTCCAAAGATCGTCTTTGCAATCGCTTTCGGTGCGTTCTTCTGTTTAGGTGTGGTGTATGATCAGGCAGTATTATCGAGGTTTTTTGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007567