Os12g0569500

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0569500| Description = Thaumatin, pathogenesis-related family protein| Version = NM_001073606.1 GI:115489173 GeneID:4352572| Length = 1028 ...")
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Gene Name

Os12g0569500

Description

Thaumatin, pathogenesis-related family protein

Version

NM_001073606.1 GI:115489173 GeneID:4352572

Length

1028 bp

Definition

Oryza sativa Japonica Group Os12g0569500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23639165..23640192

Sequence Coding Region

23639211..23639912

Expression

GEO Profiles:Os12g0569500

Genome Context

<gbrowseImage1> name=NC_008405:23639165..23640192 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23639165..23640192 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacaagctgcagctcgccatcgcgttcgtcgtcgtcgtcgtcgtcctcggcgccatggcggcatcggcggcggcggcggtggcccccatgctgacgatgcacaacctgtgcccgtacacggtgtggccgatcgtgtcgccggacagtggctcgccgcccatcgccgacgggatacggctggagggccgcggcgtcgggctgaggtcgctcaacctcccggcggggttctggtcggggcgcgtcgtgccgcgcacatggtgcagggacggcgggcggtgcgacaccgggaacgcgccgccggcgacggtggtgaggctgtcgttcaacggcgccggcgggctggcggagtacagcgtcaacctcggggaagggttcaacgtgccgacggtggtgagcccgcacgccatcggcggcgggatgtgcccggcgctgggctgcacggccgacctcaacgccgggtgcgcggcggggcagcgcgtgtacggcggcgacaccggcggcgacgtcgtggcgtgcagggggccggcgagctacttcaagcagcggtgcccgctgacgaggacgggcgggggcgacgtggagcccgtgccgcagcactgcatctcccccggcgagatcaagctcgtcttctgccaggccgccatggtcgccggcgagccggagctcatccgcaccgtcgacgtcgccgacaactag</cdnaseq>

Protein Sequence

<aaseq>MANKLQLAIAFVVVVVVLGAMAASAAAAVAPMLTMHNLCPYTVW PIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDGGRCDTGNAPP ATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHAIGGGMCPALGCTADLNAGCAAGQ RVYGGDTGGDVVACRGPASYFKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQAAMV AGEPELIRTVDVADN</aaseq>

Gene Sequence

<dnaseqindica>47..748#atactcatcagttcatcacagagagaaaagtttgcacacagctagcatggcgaacaagctgcagctcgccatcgcgttcgtcgtcgtcgtcgtcgtcctcggcgccatggcggcatcggcggcggcggcggtggcccccatgctgacgatgcacaacctgtgcccgtacacggtgtggccgatcgtgtcgccggacagtggctcgccgcccatcgccgacgggatacggctggagggccgcggcgtcgggctgaggtcgctcaacctcccggcggggttctggtcggggcgcgtcgtgccgcgcacatggtgcagggacggcgggcggtgcgacaccgggaacgcgccgccggcgacggtggtgaggctgtcgttcaacggcgccggcgggctggcggagtacagcgtcaacctcggggaagggttcaacgtgccgacggtggtgagcccgcacgccatcggcggcgggatgtgcccggcgctgggctgcacggccgacctcaacgccgggtgcgcggcggggcagcgcgtgtacggcggcgacaccggcggcgacgtcgtggcgtgcagggggccggcgagctacttcaagcagcggtgcccgctgacgaggacgggcgggggcgacgtggagcccgtgccgcagcactgcatctcccccggcgagatcaagctcgtcttctgccaggccgccatggtcgccggcgagccggagctcatccgcaccgtcgacgtcgccgacaactagctagcctagccggccggtccgttaattaattacgtgtgttttaattagtgcgtgtttaactagttaatcagatcatcaagcagttaaataattaattaattactccggttggcccgcgctaactgctaataagtgcacatggaataacaaaggcggggtacgtacatatgtacgtacccttatgtttgtacgtgcgcatatacgtgttttaattactctagtattgtatacatacttgtgtacgtacgtctacatcgtatattcgtattgtgtttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0569500, RefSeq:Os12g0569500