BGIOSGA007620

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Revision as of 03:01, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007620| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007620, complete gene.| tag = OS02G01...")
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Gene Name

BGIOSGA007620

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007620, complete gene.

LocusTag

OS02G0168400

Ensembl Transcript ID

BGIOSGA007620-TA

Ensembl Protein ID

BGIOSGA007620-PA

Length

4853

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4364137..4368989

Sequence Coding Region

4364137..4365131,4365253..4365400,4366554..4367527,4367658..4367802,4367891..4368142
,4368245..4368554,4368880..4368989

Genome Context

<gbrowseImage1> name=IndicaChromosome02:4364137..4368989 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:4364137..4368989 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCACGACGTCGCCACCAATGCCGCCGATGCCGCCTTCGTCCTCGTCCTCGCTCCGCGACCTGCTCGAGCAGGAGCGCTGCGAGTCCCACGCGCTCGCCGCGGCGCCGCGGCGGGCGCGGTCGGGCAGGCACGCGTCGCCGCCGCCGCAACGCGTGGCGCCGGAAGAGGAGGACGATGGGGGAGGAGGCGCGGCGGCGGTGGGCGCGGTGGTGGCGATGCTGTCGGGGTACGTGGGGAGGTTCGTGAAGGACGAAGGGTTCAGGCGCGGGCTGCGCGAGAAGTGCGCGGCGTGCCTCGCGCCCGCCGCGTCGCGGCGTGGCGCCGGCCACGCCGTGCTGGCCAACCTCGAGCTGGGCATCGAGAGCATCGAGCGCCTCGCCGCCGACGCCGCCTCCGCGCAGGCGCAGCAGCGCGACGCCAAGATCCGCTCCCTCCGCAACTCCATCCGCCTCCTCAGCGTCGTCGCCTCGCTCCACGCGCCGCCGCAGCCGCCGCGCCACGCCGCTCCCACCTCCGCCCCCGCGGCGGCGGAGGCCCACACCTGCGGCGTCCCGAACTCCCACCTCTCCGCCTGCGCGCAGCTCTACCTCTCCGTCGTCTACAAGATGGAGCGCAACGACCACGTCTCCGCGCGCCACCTCCTCCAGGTGTTCGTCGACGCGCCCTACCTTGCCCGCAAGAACCTCCTCCCTGACCTCTGGGACCACGTCTTCCTCCCCCACCTCCTCCACCTCAAGGTCTGGTTCACCGCCGAGGCCGACCTCGCCCCCGACGACCGGAGCCGCCGGATGAAGACCCTGCAGCGGCTGTACAACGATCACCTCAACTCCGGCACCGCCCAATTCGCCATCTACTACAAGGAGTGGCTCAAGTCAGGAGGAGCCGAGGCGCCTCCTCCCCCTTCCGTGCCATTGCCCTCCATGCCCGGAGATTTCGATGCTTGGGACAAGCATTCCTCTTCCCTGCGTAGAAGCTCCATCAACAGTGGCCTGTACAATGCGGTTTTCGGCACGGCGATGGAGCAGGAAGATGTCAAAGATACGAAGCTGGAAGATGACGAGATGTCCCAATTGGTTCTTGAGACTGATGTTGAATTGGAGGATAATCCAGGTTGCTTGAAGATGGGGAGGATTGCTCATAGTAACATGGGGCTCCAAGAAAAGCATTCCGTTATTCGGAAAGAAGGCAATATTCCAGAAACAGCACCAACACCACGGAAATCCTATTCTCTCCGACTTTTCTCGTGTCGTGGAGATCTAACCAGGAACGTCATCAACCATCCTAAGATACCAAAGAAGGAAGCCGTGTCTGTCGAGAAAGACCTAGAATGCAGTGAGCTAACAATGAATCTAGAACGAGCAGTTTCCATGGTATCTAGTTCAGACAGTCTTACGCAGTGCGAATATGCTGTGCAAGAAGTTGCCAGAGCATGTTCAAATTTGCAAGAAGATCCAAACCTTGGAACTTGGCTGTCATGTCCATCCTTTATTCAAGGGCTTCTCGAAGTCACATTCACTTCCAAGGATGATCTAGTGCTGGAGTGTGCAATTTTGATTATCGGAGAGTTGATTTTAAGCAATGAGGTGAATAGACAGATTGTACTTAATGCAGATCCACAACTTGAAGTTTTCTTGAGACTTCTGAGAAGCAAAGAGTTGTTCCTTAAGGCAGCTATAGTACTTTATTTGATGAAGCCTAAAGCTAAGCAAATGCTGTCATTGGACTGGATACCACTTGTACTGCACATATTGGAGTGCGGGGATGAGGTGCAATTTCTGTCTTCTGTGAAATGTGCTCCAAAAGTAGCTGCATTATATTTCCTAGATCAGCTCCTTATGGGATTTGACGTTGATAGAAATGTTGAGAATGCAAAGCAGATGATTGCTCTTGGTGGTTTGGACCTGCTCATGAACAGAATCGATGGCAGTGATTCCCGTGAGAGCAAAAAATGCATCTCTCTCTTGACGTCATGTATCCAAGCAGATGGCAGTTGTCGACACTATTTAGTTGATAATCTGAAGAAGGAACCTATTGTTCAACTTCTAGTAGGAAATCAGAAGAAGGCTAGTTCTGCTGCCCTTAACTTGCTGAGTGAACTAGTCTGCCTTAACAGAACAACCCAGATTTTGGAGTTCCTCAAGGAGCTGAAAAATGGTGGCTGCTTGAATACAATGCATATTCTATTGGTCTATCTCCAACAAGCTCCTATTGCCCAACATCCTCTAGCAGCTGTCATGTTACTCCAGCTTGATCTCCTGGGAGATTCTTCGCAGTACAGCGTTTACAGAGAGGAAGCGATTGATGCCATGGTAGCAGCTTTGGAGCATGGTTCACACAGCAGAAAGTTGCAAGAACAGTGTGCTCGAGCTCTCTTACTCTTGGCAGGGAGGTTTTCATCCTCAGGGGAACCGATCGCGGAAGCATGGCTACTAAAGAGAGCGGGACTAGATGACTCCCTATCCGAATCCTTCCGGAGAACAGAGATATTCAAAGATAAGAGTGCAAGGGTGGAAGAAGAAAAGATAGTTGAAGAACGGCTGAAGAAACTTGCGCTCATGTTGCTAAACAGTGGGAACAAAAAGTTCCTCACAGCGCTGTCAAACTGCATATCTGACGGAATCCCTAGTTTGGCTCGAGCGTGCCTCATCACTGTAACATGGATGAGCAGCTCACTCTCCCCGCTGCACGGGTGCAACACGTTCCAGCCTTTAGCTTGCTCCATTCTTGCGACTAAGCTTGTAGATAGCCTAAGCTATGACAGAGTTTTGGAAGAGAGGGTGCTTGCTTCACTGTCACTGTTGAACCTTGTGAGACATCCAGAATGTTTGGAGAAGCTTTACCCACTGAAGAAAGACACAGTAGAGTCATTGCAAGATCTTGCAGAAGTGACATGGACTGCAAAGGAGCTCCTTTTCGCATGCTGTAGATGA</cdnaseq>

Protein Sequence

<aaseq>MTTTSPPMPPMPPSSSSSLRDLLEQERCESHALAAAPRRARSGRHASPPPQRVAPEEEDDGGGGAAAVGAVVAMLSGYVGRFVKDEGFRRGLREKCAACLAPAASRRGAGHAVLANLELGIESIERLAADAASAQAQQRDAKIRSLRNSIRLLSVVASLHAPPQPPRHAAPTSAPAAAEAHTCGVPNSHLSACAQLYLSVVYKMERNDHVSARHLLQVFVDAPYLARKNLLPDLWDHVFLPHLLHLKVWFTAEADLAPDDRSRRMKTLQRLYNDHLNSGTAQFAIYYKEWLKSGGAEAPPPPSVPLPSMPGDFDAWDKHSSSLRRSSINSGLYNAVFGTAMEQEDVKDTKLEDDEMSQLVLETDVELEDNPGCLKMGRIAHSNMGLQEKHSVIRKEGNIPETAPTPRKSYSLRLFSCRGDLTRNVINHPKIPKKEAVSVEKDLECSELTMNLERAVSMVSSSDSLTQCEYAVQEVARACSNLQEDPNLGTWLSCPSFIQGLLEVTFTSKDDLVLECAILIIGELILSNEVNRQIVLNADPQLEVFLRLLRSKELFLKAAIVLYLMKPKAKQMLSLDWIPLVLHILECGDEVQFLSSVKCAPKVAALYFLDQLLMGFDVDRNVENAKQMIALGGLDLLMNRIDGSDSRESKKCISLLTSCIQADGSCRHYLVDNLKKEPIVQLLVGNQKKASSAALNLLSELVCLNRTTQILEFLKELKNGGCLNTMHILLVYLQQAPIAQHPLAAVMLLQLDLLGDSSQYSVYREEAIDAMVAALEHGSHSRKLQEQCARALLLLAGRFSSSGEPIAEAWLLKRAGLDDSLSESFRRTEIFKDKSARVEEEKIVEERLKKLALMLLNSGNKKFLTALSNCISDGIPSLARACLITVTWMSSSLSPLHGCNTFQPLACSILATKLVDSLSYDRVLEERVLASLSLLNLVRHPECLEKLYPLKKDTVESLQDLAEVTWTAKELLFACCR</aaseq>

Gene Sequence

<dnaseqindica>1..995#1117..1264#2418..3391#3522..3666#3755..4006#4109..4418#4744..4853#ATGACCACGACGTCGCCACCAATGCCGCCGATGCCGCCTTCGTCCTCGTCCTCGCTCCGCGACCTGCTCGAGCAGGAGCGCTGCGAGTCCCACGCGCTCGCCGCGGCGCCGCGGCGGGCGCGGTCGGGCAGGCACGCGTCGCCGCCGCCGCAACGCGTGGCGCCGGAAGAGGAGGACGATGGGGGAGGAGGCGCGGCGGCGGTGGGCGCGGTGGTGGCGATGCTGTCGGGGTACGTGGGGAGGTTCGTGAAGGACGAAGGGTTCAGGCGCGGGCTGCGCGAGAAGTGCGCGGCGTGCCTCGCGCCCGCCGCGTCGCGGCGTGGCGCCGGCCACGCCGTGCTGGCCAACCTCGAGCTGGGCATCGAGAGCATCGAGCGCCTCGCCGCCGACGCCGCCTCCGCGCAGGCGCAGCAGCGCGACGCCAAGATCCGCTCCCTCCGCAACTCCATCCGCCTCCTCAGCGTCGTCGCCTCGCTCCACGCGCCGCCGCAGCCGCCGCGCCACGCCGCTCCCACCTCCGCCCCCGCGGCGGCGGAGGCCCACACCTGCGGCGTCCCGAACTCCCACCTCTCCGCCTGCGCGCAGCTCTACCTCTCCGTCGTCTACAAGATGGAGCGCAACGACCACGTCTCCGCGCGCCACCTCCTCCAGGTGTTCGTCGACGCGCCCTACCTTGCCCGCAAGAACCTCCTCCCTGACCTCTGGGACCACGTCTTCCTCCCCCACCTCCTCCACCTCAAGGTCTGGTTCACCGCCGAGGCCGACCTCGCCCCCGACGACCGGAGCCGCCGGATGAAGACCCTGCAGCGGCTGTACAACGATCACCTCAACTCCGGCACCGCCCAATTCGCCATCTACTACAAGGAGTGGCTCAAGTCAGGAGGAGCCGAGGCGCCTCCTCCCCCTTCCGTGCCATTGCCCTCCATGCCCGGAGATTTCGATGCTTGGGACAAGCATTCCTCTTCCCTGCGTAGAAGCTCCATCAACAGTGGCCTGTGGGTGAAAGAAATTGCAATCTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGGAATGAATCACTTTGTGTGATTTTGTATCAAGATTATCTGAATTTTGCAGGTACAATGCGGTTTTCGGCACGGCGATGGAGCAGGAAGATGTCAAAGATACGAAGCTGGAAGATGACGAGATGTCCCAATTGGTTCTTGAGACTGATGTTGAATTGGAGGATAATCCAGGTTGCTTGAAGATGGGGAGGATTGCTCATGTGAGTCAACAGTTGCTTGCTTTCAGTACACTGATTAGCCTCATAATTGTGCTTATATTCTCTTGGAGTCTCAAATTAGTACCAGCATGTTTTAGACATGAGACAAATTATGGTCACTCATTGCATTCTGATAATTAAGTTGGTGTCAAGGAGACAGCTGGTTGAGCTCCATGAATTGTTTTTGTTTTCTCTAGTGTGGGGACAATAAAATTTTTTGTCTGCATTTCGAGTTATTTAAGTGCTAGGCGCCTAGGCCTAATTCGGTATCTAGCTGCCAGTAAACTGAACACCGTGTCTTTTGTGCCTCACTTGATTTACTCTTGCCAAGTAAGTACGCCAGTAAGTAAATTTGGTTTAGAATGTGCCAATGGTTTTCAAATTTTGTTACCGTTTTTCTGAATCTTGCTGTTCATATGGTTGGATTATCCATTGATTATCCATTCTATTGGAAGTGCACTTTCTGTAGAAATACATAATTTTGTCTTTGCTATCTTCCTAAACTTAATATCTTAGCATTCTATCCTTATCTAGCATAGAGGAAACAAAAGTATTGCAGAATTCAAGCAGCAGGCAAGGATTCATCCGTGTAGATTCTTTTTGTAGTCATTTTCTTCAAAAAAGAAAAGGATTGTTTTTGTAGTAAACTAGACTAGAGTGTGGCTGCAAATACAAAAGGGAGTTATGTTGTAAAAAAACATACTTGCAATCTGAACCTATTCTCTTAGTGGGACACTTTTACAATGATTTTAAATGCAGAGAAGGTGAAACTAGATGCATAATATTCATTCTTGGACCTGAATTATGATGGGCTAGTCTCTAGTTATAACTTATTACCAAAACATGCGAAATTGGGTCAAATGTTGAATTCAGAGTATCAAAACAGCCTTTGAATATGAAACACAATTTCAATTCTTAATTCTAATCTTAGTTCAGAGATCCAAACGGGTGTAAGGAGAAACAGCCCCATTTTGATATAATTGCGACAGCTTTAGAGCCTATGCCTACCTGGTGCATTTACCATTCCTTGACATTAATGTTTGAAGCATGCTAATAAGTTCTGATGTTCATTTGCCATAGAAGCTGAATAGTTCAACCCCGTGTAAATGTATATACCCTTGAAGTTATTTAATTTGTGCCTGTTTTGAGTAGACAGAGTAACATGGGGCTCCAAGAAAAGCATTCCGTTATTCGGAAAGAAGGCAATATTCCAGAAACAGCACCAACACCACGGAAATCCTATTCTCTCCGACTTTTCTCGTGTCGTGGAGATCTAACCAGGAACGTCATCAACCATCCTAAGATACCAAAGAAGGAAGCCGTGTCTGTCGAGAAAGACCTAGAATGCAGTGAGCTAACAATGAATCTAGAACGAGCAGTTTCCATGGTATCTAGTTCAGACAGTCTTACGCAGTGCGAATATGCTGTGCAAGAAGTTGCCAGAGCATGTTCAAATTTGCAAGAAGATCCAAACCTTGGAACTTGGCTGTCATGTCCATCCTTTATTCAAGGGCTTCTCGAAGTCACATTCACTTCCAAGGATGATCTAGTGCTGGAGTGTGCAATTTTGATTATCGGAGAGTTGATTTTAAGCAATGAGGTGAATAGACAGATTGTACTTAATGCAGATCCACAACTTGAAGTTTTCTTGAGACTTCTGAGAAGCAAAGAGTTGTTCCTTAAGGCAGCTATAGTACTTTATTTGATGAAGCCTAAAGCTAAGCAAATGCTGTCATTGGACTGGATACCACTTGTACTGCACATATTGGAGTGCGGGGATGAGGTGCAATTTCTGTCTTCTGTGAAATGTGCTCCAAAAGTAGCTGCATTATATTTCCTAGATCAGCTCCTTATGGGATTTGACGTTGATAGAAATGTTGAGAATGCAAAGCAGATGATTGCTCTTGGTGGTTTGGACCTGCTCATGAACAGAATCGATGGCAGTGATTCCCGTGAGAGCAAAAAATGCATCTCTCTCTTGACGTCATGTATCCAAGCAGATGGCAGTTGTCGACACTATTTAGTTGATAATCTGAAGAAGGAACCTATTGTTCAACTTCTAGTAGGAAATCAGAAGAAGGCTAGTTCTGCTGCCCTTAACTTGCTGAGTGAACTAGTCTGCCTTAACAGGTACAACGATTATACACTTCTGATAAGGTGTACACCGTTAGAATTTTTTTAGATAATGGTGCATACTGTTAGATTCATGTCTACTAAAACATCCTTTGTATTGAACTTGCTTCTTAACTTCTTAAAACAGAACAACCCAGATTTTGGAGTTCCTCAAGGAGCTGAAAAATGGTGGCTGCTTGAATACAATGCATATTCTATTGGTCTATCTCCAACAAGCTCCTATTGCCCAACATCCTCTAGCAGCTGTCATGTTACTCCAGCTTGATCTCCTGGTAACATCTTGAAAGACAAATCTTTTCTTCCTTTGCCGAGCCACATGTTTCGTATTTGTACATTCCCCATATAACAGTATTCTTGTAGGGAGATTCTTCGCAGTACAGCGTTTACAGAGAGGAAGCGATTGATGCCATGGTAGCAGCTTTGGAGCATGGTTCACACAGCAGAAAGTTGCAAGAACAGTGTGCTCGAGCTCTCTTACTCTTGGCAGGGAGGTTTTCATCCTCAGGGGAACCGATCGCGGAAGCATGGCTACTAAAGAGAGCGGGACTAGATGACTCCCTATCCGAATCCTTCCGGAGAACAGAGATATTCAAAGATAAGAGTGCAAGGGTGGTACGTTCTCATGCTAAAAAAAAACTAAATTCTATAGTTCATACCTTATAATTTGGTCTTGAAGCTAGGTTCTATTAATCTGTATGCTGTCTAAATTACCAGGAAGAAGAAAAGATAGTTGAAGAACGGCTGAAGAAACTTGCGCTCATGTTGCTAAACAGTGGGAACAAAAAGTTCCTCACAGCGCTGTCAAACTGCATATCTGACGGAATCCCTAGTTTGGCTCGAGCGTGCCTCATCACTGTAACATGGATGAGCAGCTCACTCTCCCCGCTGCACGGGTGCAACACGTTCCAGCCTTTAGCTTGCTCCATTCTTGCGACTAAGCTTGTAGATAGCCTAAGCTATGACAGAGTTTTGGAAGAGAGGGTGCTTGCTTCACTGTCACTGTTGAACCTTGTGAGACATCCAGGTATGTTTCTTTTGGTCATCTCCAACATGTTCTTGAAATGGAATTTCTTAATTTTTTTCTCATACAGTTTCACACTTTCTTTAGGCTACAATTTTCAAACTTGATACAGTCGGTACACAGTCATTTCTGTACATAAATTTTACTGCTCTTGTGAATTTTTTTTTAAAAAAATGCTTTCAGTGGACTATTATAAACTTGTCTAAGAAGAGCAGAACACTGTTGTTTCCATAGCCATGTAACTAGGAAGCTCCATTTCTCGTAATAAGATTGCATCACAATTTCGCTTCAAGCCTCATTGTTTTAAGGCAACCTTTCATTGTCACAGAATGTTTGGAGAAGCTTTACCCACTGAAGAAAGACACAGTAGAGTCATTGCAAGATCTTGCAGAAGTGACATGGACTGCAAAGGAGCTCCTTTTCGCATGCTGTAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007620