BGIOSGA007628

From RiceWiki
Revision as of 03:01, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007628| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007628, complete gene.| tag = P0030G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007628

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007628, complete gene.

LocusTag

P0030G02.26

Ensembl Transcript ID

BGIOSGA007628-TA

Ensembl Protein ID

BGIOSGA007628-PA

Length

4396

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4548542..4552937

Sequence Coding Region

4548542..4548625,4549187..4549248,4549351..4549409,4549498..4549536,4549941..4550041
,4550600..4550712,4551285..4551384,4551479..4551625,4551751..4551811
,4551925..4552022,4552095..4552237,4552530..4552613,4552698..4552787
,4552883..4552937

Genome Context

<gbrowseImage1> name=IndicaChromosome02:4548542..4552937 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:4548542..4552937 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCAGCTCTCCGCCCCCTTCCGCGCCGCCGCGGCCGCCGGATCCCGCGCCTCCGCCGCCGCCGCCGATCCCGCCAAGGTGTTACGCTTGAGAAGCGCTGGCTCAGCTCAGTTCACCTCCATCGCAGCTTCCTCTTCATTTGCTAGGAACATTGAGCCGCTGAGAGCGATAGCTACTCAGGCACCCCCTGCCGTCCCACAATATTCGAGTGGCGAGAAGACAAAGGTTGGCATCAATGGGTTTGGGCGAATTGGGAGGTTGGTCCTGCGTATTGCAACCAGTAGAGATGATATTGAAGTTGTTGCTGTCAATGATCCTTTCATTGATGCTAAATACATGGCCTACATGTTCAAGTATGACTCCACTCATGGTCCATTTAAAGGCTCCATTAAGGTTGTGGATGATTCAACCCTGGAGATCAATGGAAAGAAAGTCACAATCACTAGCAAAAGAGATCCAGCAGATATTCCTTGGGGTAACTTTGGAGCTGAGTATGTTGTTGAATCTTCAGGTGTTTTTACAACAACTGAAAAGGCATCGGCACATTTGAAGGGCGGTGCTAAGAAAGTTGTGATATCTGCTCCATCAGCAGATGCTCCAATGTTTGTCGTTGGAGTAAATGAGAAGAGCTATGATCCTAAAATGAATGTTGTTTCTAATGCAAGTTGTACTACCAACTGTCTTGCTCCTCTTGCCAAGGTTGTCCATGAGGAATTTGGCATTGTTGAGGGTCTCATGACAACTGTTCATGCCACAACAGCCACCCAGAAGACTGTTGATGGCCCTTCAATGAAAGATTGGAGAGGAGGGCGTGGTGCTGCTCAAAACATAATTCCTAGCTCCACTGGTGCAGCCAAGGCTGTTGGGAAAGTCCTCCCTGAGCTAAATGGAAAGCTCACTGGTATGGCCTTCCGAGTTCCAACACCAAATGTGTCTGTTGTCGACTTGACCTGCCGGATTGAAAAAAGTGCATCCTATGACGATGTGAAAGCAGCCATCAAGGCAGCATCAGAGGGTGCACTGAAAGGTATTCTAGGTTACACAGATGAGGATGTGGTTTCCAATGACTTCGTTGGTGATGCAAGGTCAAGCATCTTTGATGCCAAGGCTGGTATTGGACTGAGCTCTTCCTTCATGAAGCTTGTGTCATGGTACGACAACGAGTGGGGCTACAGCAACCGTGTGTTGGATCTGATTGCCCACATGGCTCTTGTCAACGCCAAGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAQQLSAPFRAAAAAGSRASAAAADPAKVLRLRSAGSAQFTSIAASSSFARNIEPLRAIATQAPPAVPQYSSGEKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVNAKH</aaseq>

Gene Sequence

<dnaseqindica>1..84#646..707#810..868#957..995#1400..1500#2059..2171#2744..2843#2938..3084#3210..3270#3384..3481#3554..3696#3989..4072#4157..4246#4342..4396#ATGGCGCAGCAGCTCTCCGCCCCCTTCCGCGCCGCCGCGGCCGCCGGATCCCGCGCCTCCGCCGCCGCCGCCGATCCCGCCAAGGGTATCGCCCTCCCTTCCATTCCTCCTGTGCTCCCTCTCCCTCACCTTCTTCCCCACCCCCCCTCCGGAATTTTCCGGTTTGTTCCGCGTCGGGGTTCGATTGGCAGAGGGTTGGGACGTCTTCGTTCGTTGTGTGACTAGTTGTGTTGCTGATACTGCGCCTAGATTTCGTCTTAAGCTTGGTTTCCGTGAATCTGGGAACCTTGGGTTGGGGGGGGGGTGCAAATGCTGGGGTTCGTTTCTTGTTTATGTGCGTTCTCCCTGGTTGCTTCGTACTATAATCTGTTCATTTCTGTGCTGGAGTATGGCGGTTACTTTTATACATACTAGTGGAGAATCATGTACCCAGGCGCTTTATTGTTATCAGCAAAAAGTTCTGTACTGTTATCAACATAGTTGATTCTTGGTCAAAGAAATCCTATTCACACTCTTCAATTAAGATGTTAATACTATTCACTCTCTTCAATTATGTGTTGCTCATAGTTAGTTTGTTGGATTTTTAGTTTTTTAGTAGTAGAAAGATGTCCCTCCTGTTGATGCGATTTGCCTGCTATGGAACAGGTGTTACGCTTGAGAAGCGCTGGCTCAGCTCAGTTCACCTCCATCGCAGCTTCCTCTTCATTGTAACTGCCTGCTTCTAATGCCTATTTCTTCCTCTTCGTTGTAAGAGCGCTTTTTTGATCTGATTATGTTTTAACGCATCTAAATAATTTTTTTAACTCAAGTGCTAGGAACATTGAGCCGCTGAGAGCGATAGCTACTCAGGCACCCCCTGCCGTCCCACGTAAGTGTCTGGTTTCCCAAACAAATGTGTAATAATAGAATTGTGCAGGCAGCAGCATTTGATTATTCCCTTTTGTTTCTGTCTGTAGAATATTCGAGTGGCGAGAAGACAAAGGTTGGCATCAATGGTGAGTTGCTTCTGTTTATTCTAGGAACCTAGTCCATTAATTTTAATGGGATATATTAATCTGTTTATTCTAGGAACCTAGTCCATTAAAAAAATTGCTATAATTTTAATGGGATATATTAATCTGTGCTGGCCAATGCATTTTGTCTTGCATGCATTTTTTCTTTTCTTTTTTTGCAAATATATGATATCAATTGCAACTGAATGTGTTAGTTCGAGTTCCATGTCTTTAGGTTTTCCAAAAGCAATTTTTAGTGCTCAGTTAGGTATATGCTACAGCAACTGAATCACCCATGGCTTGTTGGCAGAAGTAGTTTACAGTTTATTGTACCATACATCAAAAGTAGGCGAAATAATTTATTGCTATTTGTTTGTAATGCTTGTCTTATTTTTTTGGTATCATAGGGTTTGGGCGAATTGGGAGGTTGGTCCTGCGTATTGCAACCAGTAGAGATGATATTGAAGTTGTTGCTGTCAATGATCCTTTCATTGATGCTAAATACATGGTAAGAAAATAGTTCAAATTATTTGCCTACCTCCCATATTTCATACCTTGGTTGCTTCATTTAATCAATGAACATTATATTTTCAATTTTGGGGGGATGAAGTTTTGCTTGCATTTGCTACACTGCATTAGCTTATATGATGCCATGTTATGTTCTTTTAGGTTTGTAAGTGTTATAAACCTTGACGAAAAGATTGGCCTTTTCTCAGCTTAAGCTAAATTAAGATTGATGCAGATAATATTTTATTTGAAATCATTGAAAAACCTACTTAATGTGCATTCACCTTAAGTTACTTAAATATGCTATGCAGTCCATTGTGCTACATTTCAATTTGCTAGTTATATATTGGCACAGTTTCTTGGTTCTTCCATATAATCACACGAAACTGCATCCCTACCTTATGTGTTCGGTTCAATGACCATAATAGTCCATTTCAATGTTTTACTCCTAATGCAACATAATTCCTGTCACTATGGGAGTACCAACCCATCCTTCCATGCGGATGCAACATTTGGTTGTGCCTTTTCTTTCTGTAGATAATCTCTTTCTTTTTTCCAGGCCTACATGTTCAAGTATGACTCCACTCATGGTCCATTTAAAGGCTCCATTAAGGTTGTGGATGATTCAACCCTGGAGATCAATGGAAAGAAAGTCACAATCACTAGCAAAAGGTAATATCAAGTCCACTTAGGGACTAGTACATGATTACATAGAATTTCACAATTATTTGTTATCTAAGTATTGTGTTTGATGATTATTAGTAAAAAAAAAACCCTCTTGAAACATTGCTAGTAAATTTGGATCTCACAATTATTGAGGTATTGCATCACTGTGTTCCCATGCCATCATGGATTCAACCTAAAATTCTTTGGATCACTGGAAAAATAATTATTGTAGCCTAACGTATAATCTGGTCTTTTGTCGTATCACTGCTTACTTGTATAGTCGAATATATTACAATGTGCAGCCTTGTGAAATAAAGAAAAGTAAAATGTCTTTACAACTCTAACCATATCTGGAGTATGGAGTGATTGACTGAACATGCTATACGGATTTATAATTGAGTACCTTTTAGTCCTAGCTCCTAAAGTAACTCAGTATTGTTGTGTACGTTGTACATTTGGGGTACTTCACAATCCTTTCTTCACCGTGCCCCTGCTCTCGATACACAATTATGTTTCTGTGACTACATTAATTTCTGTTCTTGCATTTGCACCTAAGAATTTGCCCCCTTCTTTTCCAGAGATCCAGCAGATATTCCTTGGGGTAACTTTGGAGCTGAGTATGTTGTTGAATCTTCAGGTGTTTTTACAACAACTGAAAAGGCATCGGCACATTTGAAGGTGTGTACACCATTTCTATACATTGCCATCTAACTGAGAAATGGCAAGCTTTTATATTGGATAAAATGGTGATGTTTTTATGCCTTGTTTGTAGGGCGGTGCTAAGAAAGTTGTGATATCTGCTCCATCAGCAGATGCTCCAATGTTTGTCGTTGGAGTAAATGAGAAGAGCTATGATCCTAAAATGAATGTTGTTTCTAATGCAAGTTGTACTACCAACTGTCTTGCTCCTCTTGCCAAGGTAACTTATCTATTTCTAATCCTGTTACTATTTTCCCATTTTAATCATAACAAACAATTTGCTCTTGTGATTTTTCATATTTTCGTCCATCTAATGGAGCTAATTGATATTCCATGGGTATGCAGGTTGTCCATGAGGAATTTGGCATTGTTGAGGGTCTCATGACAACTGTTCATGCCACAACAGGTTTTCTTTCCCTTATGAATTTTGTCATTGTCAAGGATGGAGACTGCCAATTTTTCAGTCTCCTCATATCATGTTGTTCATTAGTCATAACAGACTTGCTTTCCTATATTCAGCCACCCAGAAGACTGTTGATGGCCCTTCAATGAAAGATTGGAGAGGAGGGCGTGGTGCTGCTCAAAACATAATTCCTAGCTCCACTGGTGCAGCCAAGGTACGATGAACCAAAAATCTACCTTGCTTTTCTAGATTTCTGTTTTGGCTGACTGTTTTGATTCCTTATTAGGCTGTTGGGAAAGTCCTCCCTGAGCTAAATGGAAAGCTCACTGGTATGGCCTTCCGAGTTCCAACACCAAATGTGTCTGTTGTCGACTTGACCTGCCGGATTGAAAAAAGTGCATCCTATGACGATGTGAAAGCAGCCATCAAGTATGTAGGACTATCATTTGTCCATGCACATTATCTGCTGTTTCTGTTTGGTCAATTGTTTTAAGTCTTAAAATGCTTGAGTTGGTATACAGTAGCCTTCAATAATTTGAACGTGAACAGAATAATACTTGTGTTCACAAATGAATTGCAAAAGTAACATATCCCTTGTTACGTCTTTTGACTGTGCTAGAAACTGCGGTCATGCACTTGTACCGTCTGAAGATTCTGTGATGTGCCTGTATGTAACATTGTGAATCTTTTATCAGATTTACTCATAAGCTGTGTGTTTCAGGGCAGCATCAGAGGGTGCACTGAAAGGTATTCTAGGTTACACAGATGAGGATGTGGTTTCCAATGACTTCGTTGGTGATGCAAGGTAAGTACTTCTAGATGTACCGATGTAAATGGTGTTGTGCTCAAAAGGGAGTGGTTGACATAACTGCCCCTTTCTGCATATCAGGTCAAGCATCTTTGATGCCAAGGCTGGTATTGGACTGAGCTCTTCCTTCATGAAGCTTGTGTCATGGTACGACAACGAGTGGGGCTACAGGTGAGTGTCTATATTTCCATTAAGGGGCTTAACTCTTCATCTTTTTTTCCAATTGTTCTATTGTCCTAATGATTCTGTTCCATTCTTTGTTTCAGCAACCGTGTGTTGGATCTGATTGCCCACATGGCTCTTGTCAACGCCAAGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007628