BGIOSGA007661

From RiceWiki
Revision as of 03:02, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007661| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007661, complete gene.| tag = OsI_060...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007661

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007661, complete gene.

LocusTag

OsI_06089

Ensembl Transcript ID

BGIOSGA007661-TA

Ensembl Protein ID

BGIOSGA007661-PA

Length

5130

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5089088..5094217

Sequence Coding Region

5089088..5089309,5090450..5090704,5090811..5090938,5091035..5091076,5091172..5091253
,5091332..5091400,5091477..5091647,5091727..5091792,5092074..5092142
,5092225..5092353,5093251..5093295,5093840..5093901,5094154..5094217

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5089088..5094217 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5089088..5094217 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGGGGAAGAGGCGGGGAGGGTCGTCGTCGTCGGGGCCACAGGCGGTGGCGAGGAAGAGGGACCAGTTCCCCAGTCGGGCCAAGGACTACGAGCTGCTCGAGCCGGTCGGGGATGGCGCCACCGCCGTCGTTCGCCGGGCCCGGTGCCTCCCCCTCGGCGGCGAGGTCATCGCCGTCAAGATTATGAACATGTCGCAGCGCTCTGAAGACGATGTGAATCATGCCTCTGAGGAAGTTAAAATGATGAGTACTATTGACCATGACAATCTCCTTGGTGCATATTGTTCATTTACAGAAGGTGAAACTTTATGGATTATTATGCCCTATATGGCTGGTGGGTCATGCTTTCACTTGATGAAATCTTCATATCCAAAAGGGTTTGACGAAAAATTTATAGCATTTGTCCTACGCGAAACATTAGAAGGCTTAGCTTACCTTCATCGCTATGCACTTGTACATCGGGATGTGAAGGCTGGCAACATACTCCTTGATCAACACAAAGGAGTGAAACTTGCTGATTTTGGGGCCTCGGCTAGTCTTTATGACCCAATGATTAATAGACATGGTAAAAGAAAGACTCTTGTGGGGACTCCTTGCTGGATGGCACCTGAAGTCATGGAGCAAAAGGAATATGATGCCAAGGCAGACATATGGTCTTTTGGGATAACCGCACTTGAATTGGCTCATGGTCATGCACCTTTTTCTACTCAACCTCCAGCGAAGGTCTTTCTCTTGACATTACAACATGCTCCTCCATCACTTCACAATACAAAGGATAAGAAGTTTTCAAAGTCCTTTAAGCAAATGATTGCCACTTGTCTAATGAAAGATCCATCAAAAAGGCCAACCGCACAACATTTATTGGAACTCCCATTTTTCAAAAAGGTAAAGTTTGAAGACAATGTTTTGAAATCCGTGCTAAATAAGTTGCCATCGTTGGGTGATCGGATGCAAAGTATACAGGAGAATGAAGCAAAGCTGCAAGCTGAGAAAAAACCTCTTGATAAATGCAAAGAGAAGGCATCACAGGATGAGTATATGAGAGGAGTTAGTGAGTGGAACTTTGATATAGAAGAACTAAAGGCACAAGCTGCACTGTACCCAGATGAGAATGATGGCGGCGAAGATGAGTATTTGCGTTTTCTTTTTGAACTTGATACTATTTGTGAAAGTGCTCCCATACATGACGTTCAATCACGAGATTACTCTAAAAATGAAAATGAGAAGAAAGGCCGTTTTAAAGTGACGGTAGAAGGTGCTGAGGTTGAGAAGTTGGAAGTGGCTACACCACGAGAAAAGGAATTATTAGAACGGATTGCTAGTTTGGAGCGAATAGATAAAAGGAGCAATGTCATGCCCACAGCTACAGTAGCAAAGTCCAAGTACAACCCAAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MEKGKRRGGSSSSGPQAVARKRDQFPSRAKDYELLEPVGDGATAVVRRARCLPLGGEVIAVKIMNMSQRSEDDVNHASEEVKMMSTIDHDNLLGAYCSFTEGETLWIIMPYMAGGSCFHLMKSSYPKGFDEKFIAFVLRETLEGLAYLHRYALVHRDVKAGNILLDQHKGVKLADFGASASLYDPMINRHGKRKTLVGTPCWMAPEVMEQKEYDAKADIWSFGITALELAHGHAPFSTQPPAKVFLLTLQHAPPSLHNTKDKKFSKSFKQMIATCLMKDPSKRPTAQHLLELPFFKKVKFEDNVLKSVLNKLPSLGDRMQSIQENEAKLQAEKKPLDKCKEKASQDEYMRGVSEWNFDIEELKAQAALYPDENDGGEDEYLRFLFELDTICESAPIHDVQSRDYSKNENEKKGRFKVTVEGAEVEKLEVATPREKELLERIASLERIDKRSNVMPTATVAKSKYNPS</aaseq>

Gene Sequence

<dnaseqindica>1..222#1363..1617#1724..1851#1948..1989#2085..2166#2245..2313#2390..2560#2640..2705#2987..3055#3138..3266#4164..4208#4753..4814#5067..5130#ATGGAGAAGGGGAAGAGGCGGGGAGGGTCGTCGTCGTCGGGGCCACAGGCGGTGGCGAGGAAGAGGGACCAGTTCCCCAGTCGGGCCAAGGACTACGAGCTGCTCGAGCCGGTCGGGGATGGCGCCACCGCCGTCGTTCGCCGGGCCCGGTGCCTCCCCCTCGGCGGCGAGGTCATCGCCGTCAAGATTATGAACATGTCGCAGCGCTCTGAAGACGATGTGGTACGTACGTACGTCCATTTCTTCTTCTTCGTCGTCTCTGGATCATGCGTACTTGCTTATGCGAGTCGACTGTGTCGTGTCATTGGTGCATGCAGCATCCAAACTCGTGCAAACTTAAGTTCATCAGTAATTTCTAGTAATCTAGTTGCATGATGATTTCATAAATTTTAGCGGATTATAATTTTTTTCGTAGGAATTATCACGGCCCTGAAGGTTCTAAGTTTATGCATGTTTTCTGAAATGATCAGTTAAGTCTTTAGGTCAAAAACGTAATTAGTATTTCCAATGGTAGAATAGAAGACATATAAAACAAAATTGTATACTATATGCATACTATAAGCATTACTGAATATCAAATGAACTTGATACACAAATTAGACAATGAATCTGAAGGTAGGCTTAAGTATAAGTTTATTTACTTAACTAATACTTAAGTCTTCGAGTCGAAAAGAATAACTATTTCTAACAATGGAATATAATATCTACGTAACAAAATTGTGTATATCATGCATACTGCGTGCATTACTGAATATCAAATAAACTTGGTACATAAACAACTAAGAAGATTTAAGTATAAGTTTTACTTATTAAGAGGTCTTGAAGTCTTCGGGTTAAAAAGAGCAACTATTTCGAAAAGTGGACTAGAACCTATACATACATAACAAAATTGCGTACGACATGCATACTGTGAGCATTAGCCCCTCTCTCCCTCTGTCCCTGGAAAAGCGATGGTGCTAGCATTCATGATAGCAAGCTAAGCAATGCACATGAGGCATTTTCCCAACACAAATATCTCTACATTGTATCTAAATAAGAAACGTAATTAACTCTTTGTTTCACATAATGAATTTAATATATGTCTTTGGGTGACCGTCACCCTGGCCTTAACTTACTTCTTCTTACTAAGTTAAATCTGCTATGTGTTTGGGATTTAGACATAATAACTAATTAAATTTATAGTATTGCATTGGAGATGACTTCATGAAACAGTAGATGCGAGTGTTGATTTGTAGATAATTGTAGTCTTATTAATAACATGGTTGTGCATACCTCTAGATGCATAGTGTGCAAGAATGAAATTATGAACATATTACTCGTCAGTTGTATTGAGAGACACCTATATTTCTTTACTTTCTGCAGAATCATGCCTCTGAGGAAGTTAAAATGATGAGTACTATTGACCATGACAATCTCCTTGGTGCATATTGTTCATTTACAGAAGGTGAAACTTTATGGATTATTATGCCCTATATGGCTGGTGGGTCATGCTTTCACTTGATGAAATCTTCATATCCAAAAGGGTTTGACGAAAAATTTATAGCATTTGTCCTACGCGAAACATTAGAAGGCTTAGCTTACCTTCATCGCTATGCACTTGTACATCGGGATGTGAAGGTATGAATCTTTATCATGCAAAGTTTAATAAATATGAATTAATTCATAATTTATATGGCTAACATGTATTACGGTAACACACCATGTACTTCATACGTGATCTTAGGCTGGCAACATACTCCTTGATCAACACAAAGGAGTGAAACTTGCTGATTTTGGGGCCTCGGCTAGTCTTTATGACCCAATGATTAATAGACATGGTAAAAGAAAGACTCTTGTGGGGACTCCTTGCTGGTAATTTCTAAAGAACAGAAAAGAACTATTTGTGAATTTTAAACTACCCAAGTCAATTTAATGCTAATATACTATTTATTTTGTTTTTTCCTTTAGGATGGCACCTGAAGTCATGGAGCAAAAGGAATATGATGCCAAGTACTTATCAATTTTGATTATTGGCTTATCATCTTTCAGTTAAGAATGAGTGTTTTTATTTTTATATTTTTCAATAAAACAAAAGTCAACTGTAGGGCAGACATATGGTCTTTTGGGATAACCGCACTTGAATTGGCTCATGGTCATGCACCTTTTTCTACTCAACCTCCAGCGAAGGTATTTGTTTAGTCTAAATTTTTTATTTTTTTTCATAGTGTCATGATAACTTAATACCTTTTATCAAATATTGTATAGGTCTTTCTCTTGACATTACAACATGCTCCTCCATCACTTCACAATACAAAGGATAAGAAGTTTTCAAAGGTTCATAAATCTTTATATGGTGGCTCAATATGTGTATTTTTAACTATACTACCTTAATTGTACATTTGTTTTGCAGTCCTTTAAGCAAATGATTGCCACTTGTCTAATGAAAGATCCATCAAAAAGGCCAACCGCACAACATTTATTGGAACTCCCATTTTTCAAAAAGGTAAAGTTTGAAGACAATGTTTTGAAATCCGTGCTAAATAAGTTGCCATCGTTGGGTGATCGGATGCAAAGTATACAGGTATGATCCCTACATCGTCCTATCATAGTCAAATATTCATCCCTTCATAATATTAAATTCTATAAGTTATTTTCTGTAGGAGAATGAAGCAAAGCTGCAAGCTGAGAAAAAACCTCTTGATAAATGCAAAGAGAAGGCATCACAGGTTTATAGTACTAAAAATATACTTTGCAATTTTTGTTACACTAACAACATTGTTATGACAAATGCATTTTCTCTAATTTTCATTTGCTAGTGCAATTATTACTTGTTCACACCTATAAATTGTATTATTGCTATTAGAACTAATGAATGCATCTAAATTGGTGCTAACATTAACTAAGATTATGTGAGATCAGGTTGTTATATAATTTTAATTTATGGTAACCGTCATTATCTAGAAATCGATACTATTGTAACAATCTTTGAACATTTTTTTACGTACAGGATGAGTATATGAGAGGAGTTAGTGAGTGGAACTTTGATATAGAAGAACTAAAGGCACAAGCTGCACTGGTACGAGTATACTTTTTTTTGCAAAGGTTGTAACAACCTTTTAACTATTAACTATATAAAGTTTTTTTTGAACAATGTTTAGTACCCAGATGAGAATGATGGCGGCGAAGATGAGTATTTGCGTTTTCTTTTTGAACTTGATACTATTTGTGAAAGTGCTCCCATACATGACGTTCAATCACGAGATTACTCTAAAAATGAAAATGAGAAGGTAATTTTATTTTTGAGATTTTTTATTTTTATTTTAGTGACTATGTTAATATATACATATATCTAATAAAAGTCACATTTTCAGAAGGAAAGCAATGAAATCACAAGAAATGAGAAAATAGATACGACGCCCATACTTCAAAGGTTCATCATCGACTTCATTCATTGCACAATGATTCATTTTTTTAATACAATAATAATTTTCATTAAAATAATTATGCAAATCATTTCACAATAATAGGTGTTCCAAATATGTATTCTTTAACAATAAATGCTCAATGTTAATGCCACAATCTTTTTTTTTGAGCCAAGTATGTTATTGATGTAACAACTTTCATAAGATGTTTACAATGCATTGTGTGGTTATTTGACCATTATTGTGTTTTATTATATCATTGCCCTCTACTTATATTACATACAAGCTCTATCATTTTGGTTGGACATGATTTATTTAGGAATGATTCCATGAGATTCTGATGTAATCACAAGCATAAAAAAGTTTAATACATCATATCTAACTTAGTTGTTTATGTCAGTGTGAAACAATTTGAGAATAAAGGAAGCCCTAATGGCCTCGTGCGCCACGAGTCATTTCAACATCGACCCAAATCACCTACTAAGCAAATCACAAGAGCAGGCATGTTTGTACATTTCCTTATCCCAACTAAAAAAGTGGCGGTTAAATGCATTATAATAGTTTTAAATTAAGTATTGGGTAATTAGTATTGTTCATATTTTCTTATGCTTATTATTGTTTCACACATTTTAAAACTTTGCATTTTGAATATAGTATAAATTTTGGAGTGGTTTACACACATTAGAGCAAGGTAAGAATGATTTGTTTTTTGCAGTATCAAATTGCAAGGACTTTGATGAATATCTTAAATCGGCCATTCAGAAAGGCCGTTTTAAAGTGACGGTAGAAGGTGCTGAGGTTGAGAAGGTAAGTCTTTTATTATACGAAAATTTTCTATATGTGATCAAGTTTTTAAAGCATTACTTTTGACTTGTTTATTGCATGATATTTTCTCTAACTATAAGTAGGGGTAAAACAAGTTATATGTGACATGGTACTCATTTTGAATTAGTTTATATCATAATTACTAGTTTATGTGCTTATTTTTGTTCAATTCATTTGTCCTTCTCTTGCAATTTACATGTTTTGGTAGAGTATATTCGCCGAGTAAAAAAAAAAGAACTATCAGACGAACATCATATTTGATATATATCATTTCATATATAGGGTATAAAGTCATTTTGCATGCACCCTAAGTTATGTAATGCCATAATCTTCAATTTAGTTTATCTTGGTCATATGATTATCTATATTATGTATGTTTCTTAATTTGTAGCTTCAACATATCTAGTTTTAGTTGTTAACAAATTGCAATCCAATAGGCTTATGAACTAGTTAACGTATAAATGCTATTGTTAAACATTGATAGGAACATTTTTAAAGTAACCATTTGAAATCTTCTTTGTGGCAGTTGGAAGTGGCTACACCACGAGAAAAGGAATTATTAGAACGGATTGCTAGTTTGGAGCGAATGTACGCCTCTATTTGAAACAACTTTCACTATCTTAACATATAATTCTCTAGTTTAAAGTGAAAGTAATTTATTTGTTTATAACATCATATTTTGTAACCATATATCTTTGTAGGCTCCATGATAGCCAAGAGGAGGTTCAGAGGCTTAGAGAAAAGGGTAATTGTAATTTTGTCCTAAAATTATACTTCCCAGAGATTAAGAGGTTTACTTTAGATTCACAGTTTATATTTTGTTCCACATGCTCTTTGCAGAGATAAAAGGAGCAATGTCATGCCCACAGCTACAGTAGCAAAGTCCAAGTACAACCCAAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007661