BGIOSGA007727

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Revision as of 03:03, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007727| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007727, complete gene.| tag = OJ1225_...")
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Gene Name

BGIOSGA007727

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007727, complete gene.

LocusTag

OJ1225_F07.14

Ensembl Transcript ID

BGIOSGA007727-TA

Ensembl Protein ID

BGIOSGA007727-PA

Length

4793

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6211932..6216724

Sequence Coding Region

6211932..6212544,6212641..6212843,6212932..6213129,6213227..6213298,6213721..6213816
,6214352..6214431,6214517..6214592,6214670..6214880,6215080..6215273
,6215352..6215457,6215555..6215644,6215988..6216724

Genome Context

<gbrowseImage1> name=IndicaChromosome02:6211932..6216724 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:6211932..6216724 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGTTGGGGTCGTGGTGGTGGTGGTGGTGTTCTTGGCCGCCGCCGTCGATGGCGTCGCGGGGAAGGACTGCACGAACGGGTTCCCGGGGCTGACGGCGTCGCACACGGAGCGCGCGGCCGCGGCGGCGGAGCTGCGGCCGGACGGCGAGGTCGAGGCGGCGCGGGTGCTCGATCTCCTCCTCCCCCACGGCCACGGCCACGGCGACGACCACGACGGCGACCGCCACCTCACCCCCACCGACGAGTCCACCTGGATGTCTCTCATGCCGCGGAGGCTCCTCGCGAGCCCCGCCTCTTCCCCGCGGCGCGACGCGTTCGACTGGCTCATGCTCTACCGCAACCTCCGGGGCTCCGGCTCCGGCGCCGGCGCCATCGCCGCGAGCGGCGGCGCGCTCCTGGCGGAGGCGTCGCTGCACGACGTGCGGCTGCAGCCGGGCACCGTGTACTGGCAGGCCCAGCAGACCAACCTGGAGTACCTGCTCCTCCTCGACGTCGACCGCCTCGTGTGGAGCTTCCGCACGCAGGCCGGCCTTCCGGCGTCCGGGGCGCCCTACGGCGGGTGGGAGGGCCCCGGCGTCGAGCTCCGGGGACACTTCGTCGGACACTACCTGAGTGCTACTGCCAAGATGTGGGCGAGCACACACAATGACACTCTCCAGGCGAAGATGTCATCGGTCGTCGACGCGCTCCATGATTGCCAGAAGAAGATGGGATCGGGGTACTTGTCGGCCTTCCCCTCGGAGTTCTTCGACAGGGTTGAGTCCATCAAGGCTGTTTGGGCTCCTTACTATACAATTCACAAGATTATGCAAGGTCTTCTTGATCAGTATACGGTGGCCGGGAATTCTAAGGCCCTTGATTTGGTGGTCGGGATGGCCAATTACTTCAGTGACCGTGTGAAGAATGTCATACAGAAATACAGTATTGAGAGGCATTGGGCTTCACTCAATGAGGAGAGTGGTGGGATGAATGATGTGCTCTATCAGCTCTACACGATAACGAATGATCAGAAGCATCTGACTCTGGCCCATCTTTTTGATAAGCCATGTTTTCTTGGGTTGCTTGCAGTTCAGGCCGACAGTATTTCAGGCTTCCATTCCAATACACACATTCCAGTTGTTATTGGTGCACAGATGAGATATGAAGTTACTGGTGATCTTCTTTACAAGCAAATTGCAACGTTTTTCATGGATACCATCAATTCTTCTCATAGCTATGCTACTGGGGGCACATCTGCTGGTGAATTTTGGACCAATCCAAAGCGTTTAGCTGATACTCTGAGTACTGAGAATGAGGAATCTTGCACAACCTACAACATGCTCAAGGTTTCTCGCAACCTATTCAGATGGACAAAGGAATTATCATATGCAGACTATTATGAAAGGGCACTGATAAATGGTGTTTTAAGCATCCAAAGAGGGACTGATCCCGGGGTGATGATTTACATGCTACCTCAGGCCCCTGGACGGTCTAAAGCGGTTTCCTATCATGGTTGGGGAACAAAGTATGACTCCTTCTGGTGTTGTTATGGGACAGGGATAGAATCCTTTTCGAAACTTGGCGATTCCATTTACTTTGAGGAGAAAGGAGATAGACCGGTGCTAAACATCATTCAGTACATACCAAGTGCTTATAACTGGAAAGCAGCTGGGCTTACTGTTAATCAACAACTAAAGCCAATCAGCTCTTTGGACATGTTTCTTCAAGTTTCACTCTCCACTTCTGCAAAGACAAATGGTCAGTCTGCCACATTGAATGTGAGAATACCATCATGGACATCTGCCAATGGCGCAAAAGCAACTCTAAATGACAACGATTTAGGATTAATGTCTCCAGGGTCTTTCCTTTCAATCTCCAAACAGTGGAACTCAGATGATCATTTATCACTACAGTTCCCTATTACACTAAGGACTGAAGCAATAAAAGATGATCGGCCAGAATATGCATCTCTTCAAGCAATCCTATTCGGGCCATTTGTTCTAGCTGGCCTGTCAACTGGTGATTGGAATGCAGAAGCCGGCAACACCAGCGCAATTTCAGACTGGATATCTCCAGTCCCTTCATCCTACAACTCACAGCTGGTGACCTTCACACAAGAATCCAGTGGGAAGACCTTCGTCCTCTCGAGCGCGAATGGCTCTCTCGCAATGCAAGAACGGCCGACGGTCGATGGCACTGATACCGCCATCCACGCGACATTCAGAGTACACCCTCAGGACTCAGCAGGGCAGCTTGACACCCAGGGTGCAACCTTGAAGGGGACCTCTGTGCAGATAGAACCATTTGACCTCCCAGGAACGGTGATCACCAACAACCTTACCCAATCCGCGCAAAAGAGTTCAGATTCCCTCTTCAACATTGTACCTGGGCTAGATGGAAACCCAAACTCGGTCTCCCTCGAGCTCGGGACCAAACCGGGATGCTTCCTGGTGACAGGCGTGGATTACTCCGTGGGTACAAAGATTCAGGTCAGTTGCAAGAGTTCTCTTCCAAGCATCAACGGGATTTTCGAGCAGGCCACGAGCTTTGTGCAGGCTGCTCCATTGAGGCAGTACCATCCTATCAGCTTCATTGCAAAGGGGGTGAAGAGGAACTTCCTGCTTGAACCATTGTACAGCCTGAGAGACGAATTCTACACGGTTTACTTCAACCTTGGGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAVGVVVVVVVFLAAAVDGVAGKDCTNGFPGLTASHTERAAAAAELRPDGEVEAARVLDLLLPHGHGHGDDHDGDRHLTPTDESTWMSLMPRRLLASPASSPRRDAFDWLMLYRNLRGSGSGAGAIAASGGALLAEASLHDVRLQPGTVYWQAQQTNLEYLLLLDVDRLVWSFRTQAGLPASGAPYGGWEGPGVELRGHFVGHYLSATAKMWASTHNDTLQAKMSSVVDALHDCQKKMGSGYLSAFPSEFFDRVESIKAVWAPYYTIHKIMQGLLDQYTVAGNSKALDLVVGMANYFSDRVKNVIQKYSIERHWASLNEESGGMNDVLYQLYTITNDQKHLTLAHLFDKPCFLGLLAVQADSISGFHSNTHIPVVIGAQMRYEVTGDLLYKQIATFFMDTINSSHSYATGGTSAGEFWTNPKRLADTLSTENEESCTTYNMLKVSRNLFRWTKELSYADYYERALINGVLSIQRGTDPGVMIYMLPQAPGRSKAVSYHGWGTKYDSFWCCYGTGIESFSKLGDSIYFEEKGDRPVLNIIQYIPSAYNWKAAGLTVNQQLKPISSLDMFLQVSLSTSAKTNGQSATLNVRIPSWTSANGAKATLNDNDLGLMSPGSFLSISKQWNSDDHLSLQFPITLRTEAIKDDRPEYASLQAILFGPFVLAGLSTGDWNAEAGNTSAISDWISPVPSSYNSQLVTFTQESSGKTFVLSSANGSLAMQERPTVDGTDTAIHATFRVHPQDSAGQLDTQGATLKGTSVQIEPFDLPGTVITNNLTQSAQKSSDSLFNIVPGLDGNPNSVSLELGTKPGCFLVTGVDYSVGTKIQVSCKSSLPSINGIFEQATSFVQAAPLRQYHPISFIAKGVKRNFLLEPLYSLRDEFYTVYFNLGA</aaseq>

Gene Sequence

<dnaseqindica>1..613#710..912#1001..1198#1296..1367#1790..1885#2421..2500#2586..2661#2739..2949#3149..3342#3421..3526#3624..3713#4057..4793#ATGGCGGCGGCGGCGGTTGGGGTCGTGGTGGTGGTGGTGGTGTTCTTGGCCGCCGCCGTCGATGGCGTCGCGGGGAAGGACTGCACGAACGGGTTCCCGGGGCTGACGGCGTCGCACACGGAGCGCGCGGCCGCGGCGGCGGAGCTGCGGCCGGACGGCGAGGTCGAGGCGGCGCGGGTGCTCGATCTCCTCCTCCCCCACGGCCACGGCCACGGCGACGACCACGACGGCGACCGCCACCTCACCCCCACCGACGAGTCCACCTGGATGTCTCTCATGCCGCGGAGGCTCCTCGCGAGCCCCGCCTCTTCCCCGCGGCGCGACGCGTTCGACTGGCTCATGCTCTACCGCAACCTCCGGGGCTCCGGCTCCGGCGCCGGCGCCATCGCCGCGAGCGGCGGCGCGCTCCTGGCGGAGGCGTCGCTGCACGACGTGCGGCTGCAGCCGGGCACCGTGTACTGGCAGGCCCAGCAGACCAACCTGGAGTACCTGCTCCTCCTCGACGTCGACCGCCTCGTGTGGAGCTTCCGCACGCAGGCCGGCCTTCCGGCGTCCGGGGCGCCCTACGGCGGGTGGGAGGGCCCCGGCGTCGAGCTCCGGGGACACTTCGTCGGTGCGCCACCGCCATTTCTCGGCATCACTTGCACAGCGAAATCGCGCAATTGGTCTGAATTTGCGGTGGCTTTGCTTTGCTGCCTGTTCTTTGCAGGACACTACCTGAGTGCTACTGCCAAGATGTGGGCGAGCACACACAATGACACTCTCCAGGCGAAGATGTCATCGGTCGTCGACGCGCTCCATGATTGCCAGAAGAAGATGGGATCGGGGTACTTGTCGGCCTTCCCCTCGGAGTTCTTCGACAGGGTTGAGTCCATCAAGGCTGTTTGGGCTCCTTACTATACAATTCACAAGGTATATGGGGGAATTTCAGTTCCTAGTGTTGCTTGATCACTACATTATATCATTGTCTTGCTACATGAGTGCAATTCTTGGTTTGCAGATTATGCAAGGTCTTCTTGATCAGTATACGGTGGCCGGGAATTCTAAGGCCCTTGATTTGGTGGTCGGGATGGCCAATTACTTCAGTGACCGTGTGAAGAATGTCATACAGAAATACAGTATTGAGAGGCATTGGGCTTCACTCAATGAGGAGAGTGGTGGGATGAATGATGTGCTCTATCAGCTCTACACGATAACGGTGATTGTCGGTTTGTTATGAGATGGGAATACTGCCTTGATTAATGCAATTTTCTCTAGTGGAGTTGCTAACTTTTCTAGTTTTCTTGCATGTGCAGAATGATCAGAAGCATCTGACTCTGGCCCATCTTTTTGATAAGCCATGTTTTCTTGGGTTGCTTGCAGTTCAGGTCTGCTGATTTATTTTCTTACCTGCTTTTGTTCTTATATTCTGTATCATCTATGAACATGTGTCAATTTATGGTGAATGACTCAGACCAACTTACATTCAACTTCAACCTTGTTTGTCATATAGCAATTTACCTGTTTTACTAACTGTCAAAAATTATGGATTACCTAATATCCAGTTTTGAGTTGGCACTTGGCAGTTTGAAAATCAATATAACTACATGTTTGCGTGCCAAATGGATCTATTATTTCAATTCTACTGTTCATTTTGTCATTATATTTTTCCCACTATAGCAAAGACACTACCTAAAATGAAGTTTAGAACTTTTGGCTTGGGTGTCTGATTCCAGAGGATACAAGAATAGTAGTATTCCTATTGCAGTAATGTCTCTGACTGATAAATCTTGAGTGTGCTTCAATTCAGGCCGACAGTATTTCAGGCTTCCATTCCAATACACACATTCCAGTTGTTATTGGTGCACAGATGAGATATGAAGTTACTGGTGATCTTCTTTACAAGGTAAAAGAACACAAACCTTTCTTTCTGGATATTTACTCCATATGCATACATGAAGATGAATTATCTGTCCAGGGATATGGATATGAATGTACAATGCTAATAGTTTAGATTATCATATTGGTTACTTTTTTTTAGTGGTCATATTGGCTGCTTGGCTGAAAGGAAAAGGATAGCTTTATTCTGCTTACAGATTATGCATATTTCCTGCTGATATTGGTAAATTTCCAGATATGGGCCTGGAAGTGTGATAGCATAATCCGGGGAAAATAGTATATTTCTTGCTAACCCATGCTTTCTCTAGGTAAACTATAGTTTTTGGGCAGTATTATACCTTTCATTACCTATTAGCTCTGTAGTTATCCATATGCAGTCCCTTTTTTTGTCAGCTGTATGTCAAAGCCATGTGTTGGTTTTTTACTGGAGTTTTTTTATGCTGTTTTTTACTGGAGTTATACTATCTGTTTTTCTTTCTAATTCTTTTCACTAACATCATTTGAGAGAAAAGCTGATTGTAATCATAATTCTCATGAAACAGCAAATTGCAACGTTTTTCATGGATACCATCAATTCTTCTCATAGCTATGCTACTGGGGGCACATCTGCTGGTGAATTTTGGTAATTTTACTCTAGATTCTGAATTCATAGTCAATAGTATATTTCTCTTTGATGTATGACTATCTACTTCTATATAATTATTCAGGACCAATCCAAAGCGTTTAGCTGATACTCTGAGTACTGAGAATGAGGAATCTTGCACAACCTACAACATGCTCAAGGTTCACAATATCAAACCACTCTCCTGAACATTCAATCTCTCTCTCTCTCTCAATGGGTTCAATGCAATCTACTGCAGGTTTCTCGCAACCTATTCAGATGGACAAAGGAATTATCATATGCAGACTATTATGAAAGGGCACTGATAAATGGTGTTTTAAGCATCCAAAGAGGGACTGATCCCGGGGTGATGATTTACATGCTACCTCAGGCCCCTGGACGGTCTAAAGCGGTTTCCTATCATGGTTGGGGAACAAAGTATGACTCCTTCTGGTGTTGTTATGGGACAGGTAAATAAAATGCTTCTGAGTTCTGCTTATTTAACACTGCTGCTTTTACATGAAAATATTGCGGTAACAGTTTGTCAAATTAATACCGTGATTTTAGTATTACTTTGCTTGTGTTTTCATTCGAAGTTGTGAAAATTTGAATTGAAAGGCAATTTATCAGGTGGCCTGTTTCTTTATGGATCTTCTATTTCATTTACAGGGATAGAATCCTTTTCGAAACTTGGCGATTCCATTTACTTTGAGGAGAAAGGAGATAGACCGGTGCTAAACATCATTCAGTACATACCAAGTGCTTATAACTGGAAAGCAGCTGGGCTTACTGTTAATCAACAACTAAAGCCAATCAGCTCTTTGGACATGTTTCTTCAAGTTTCACTCTCCACTTCTGCAAAGGTAATTTCTTTTAATGTACGTTACATGAAAATCAGATGAAAGAAGCAGCAGTTAGCTTCCTCTATTCTACTTATGCAGACAAATGGTCAGTCTGCCACATTGAATGTGAGAATACCATCATGGACATCTGCCAATGGCGCAAAAGCAACTCTAAATGACAACGATTTAGGATTAATGTCTCCAGGTACAATCTTTTGAGTGCATGAACAAAAAAATATATCCATTTCAATCGTCCTTGATCATGTTTTAGACAAGTTCTTACTTTATTGTTTTGTGGGCAGGGTCTTTCCTTTCAATCTCCAAACAGTGGAACTCAGATGATCATTTATCACTACAGTTCCCTATTACACTAAGGACTGAAGCAATAAAAGGTCAAAACTCAACTTTTAGGAAATTTCTTCTGTTTTCAAGTATGCATCAAAGTGTTCAGATGATCATTTATCACTACAGTTCCCTATTACACTAAGGACTGAAGCAATAAAAGGTCAAAACTCAACTTTTAGGAAATTTCTTCTATTTTCAAGTATGCATCAATGTGTTTTGCTTAGTTCACATACAATTGTTTGACATTTCAACCGAAAATTATCAATTAACATAAAAAATCATAAGCTAATAGTGAATATGAAACTGTGACGATGTGACATACACCAACTATTGTGATTTATTTTAGTCAGAATATTCATCTCAATGTTAACTGCTATGCTGTGACATCAGATGATCGGCCAGAATATGCATCTCTTCAAGCAATCCTATTCGGGCCATTTGTTCTAGCTGGCCTGTCAACTGGTGATTGGAATGCAGAAGCCGGCAACACCAGCGCAATTTCAGACTGGATATCTCCAGTCCCTTCATCCTACAACTCACAGCTGGTGACCTTCACACAAGAATCCAGTGGGAAGACCTTCGTCCTCTCGAGCGCGAATGGCTCTCTCGCAATGCAAGAACGGCCGACGGTCGATGGCACTGATACCGCCATCCACGCGACATTCAGAGTACACCCTCAGGACTCAGCAGGGCAGCTTGACACCCAGGGTGCAACCTTGAAGGGGACCTCTGTGCAGATAGAACCATTTGACCTCCCAGGAACGGTGATCACCAACAACCTTACCCAATCCGCGCAAAAGAGTTCAGATTCCCTCTTCAACATTGTACCTGGGCTAGATGGAAACCCAAACTCGGTCTCCCTCGAGCTCGGGACCAAACCGGGATGCTTCCTGGTGACAGGCGTGGATTACTCCGTGGGTACAAAGATTCAGGTCAGTTGCAAGAGTTCTCTTCCAAGCATCAACGGGATTTTCGAGCAGGCCACGAGCTTTGTGCAGGCTGCTCCATTGAGGCAGTACCATCCTATCAGCTTCATTGCAAAGGGGGTGAAGAGGAACTTCCTGCTTGAACCATTGTACAGCCTGAGAGACGAATTCTACACGGTTTACTTCAACCTTGGGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007727