BGIOSGA007728

From RiceWiki
Revision as of 03:03, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007728| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007728, complete gene.| tag = OJ1524_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007728

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007728, complete gene.

LocusTag

OJ1524_D08.2

Ensembl Transcript ID

BGIOSGA007728-TA

Ensembl Protein ID

BGIOSGA007728-PA

Length

3268

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6223091..6226358

Sequence Coding Region

6223091..6223189,6224991..6225089,6225164..6225265,6225346..6225405,6225490..6225596
,6225704..6225786,6225962..6226052,6226151..6226358

Genome Context

<gbrowseImage1> name=IndicaChromosome02:6223091..6226358 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:6223091..6226358 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAAAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATCAGACTGGAATTGCTGATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGAGGCTGATATTGAAGAATTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTGAGCTGAAGTCAACAAAAGCATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCACAAACCCATTAGAGAGAAGAGTGAAGAAGAACAAGAAGAAGAGCGAGGAGAACGATCTGATCCTCGCGATCTCACAGCGCAGGGCACAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAATGTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MGRKRRARVSRDGDGEEEEEPAPVAAESKSLYEILGVERTASQQEIKKAYHKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGIADDDALVGEAADNLQEYFRAVYKKVTEADIEEFEAKYRGSDSEKKDLKDLYTKFKGNMNRLFCSMICSDPKLDSHRFKDIIDEAIAEGELKSTKAYDKWAKKISEIEPPTNPLERRVKKNKKKSEENDLILAISQRRAQRKDRFDSVLSSIMSKCDPKGSSSSEPTEEEFEQARQRLEKKRSKNRK</aaseq>

Gene Sequence

<dnaseqindica>1..99#1901..1999#2074..2175#2256..2315#2400..2506#2614..2696#2872..2962#3061..3268#ATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGGTAAATCCCCAACTCCAAACCCTAGGTCTATGGCTTACGAGGTGTTACCCGTACGGGTAGCGGTTGATTTTGCGGCGGGGTGGTGTTGGTCTGATCGAATCGTGTGCTGGATGCCTGGATCGATGTTTTTTTGTTCTTTTTCTTTTTTTTTTCCGGGATTCGAGGGTGAGGAGCGCATCTGATTGTTCGATGCGATAGCGGGATAGCTTTCGTTTTCTTGTTTATCCGGTGTCGCGTCAGGTTCCGCCCGTTGGGGAATTTCGTGGTTCGCTGCGCGGATTGATCGTGTGTTAGTACTAGTGTACAAGTATAACCCATATTTGCATACCAGATTACCTCGAATTGAAGCAACTGTGTGTACCATTTCAATGTGCAAAAACAATTGGGCAAGATTATGCTACTGATGAACCCAAAGTACGAAGTGCGTACTTATGCAATAGGAAAAACATTTTGTATCCCAAACATGGAGGCAGTTGCTTGAAGGCTCACATTTCACTTGTGAAGCCTTATGACTGATATGGGAGAGTGCTTATTGGTTTGGCCTTAACTTTCAGCTCTAGTTTTGGGCTTCGCAGTAGTAGTACCTCTCCAAGGATTTTATAGTGACTTAATCTTCTTTAAATCTTGCTGGCCTTCCTGCCAATTGCTCTTTGATGGTATGGCATTCTTGCCTTTGAGCTATACCTGTTCCTCTTAAGTATTACTACCACAGAATTTATGAAGGTCAACTGATGTTTAAATCTAATTTTTATCATGTTCTGGAATCTGGAGTAAATGTCAAACAATCAAACAGTTACGTGGCTGGGTGTGATAGGGCCTCTAACTCTCTACTATGCACATACATTGAGGACATAGTTCAATCCTTGCTAGCTTGTCTCGTTAAAAATTTATATTGTCAAATAAAAAGGGTTTCTCATATCATCCGATCAATCAGAAAACACCAATGACTGGGTAAAGTGTGCAAGAGCCAAGAGGTACAAGAGGTTGTGATTGGCGGTTGATCTCAAGCTATACCACTATTAGTTTTAAAAGCAAGTACAATAGCATTACCTTACTTGCATAACTTAATTCAATAAACCTTATATATGTCCCAGCTGTTCAGACATCAGTATTTTTTTTTGTCTTGATCTGTGCTGAAAAATTGTAATTAATTGGCGCACACTACTAGACTGTGTTTAGCGCGTTTTAAAAAAATTCTAGACTGAAGGAAATGTTGCTGAAACCTAAGCTTAATGAAGTGCCAAAGAAGAGCTGAAAGAGTTCATGGAAATTCATGTAATTGACTTTAAAAAGGCCACAAATCATAAGATTGCAACCAGAAACAGTGGCTCCTATAGGCTGAGCTAGCTGCAAGCCTGCAACTTAAGAGCCCCATCGGTTGGCCTAATAAGCCAAAGCAAAAGCCAAAATTTGAATTTTTGAACTTGATTTTAAGATATTTTCAATGTAGTTTCTTTTAGTGTTGGATTTTAAGTTGCTATGAACAAATATATAAAAGTTTTACCTATAAATTAATTTTTATATGGCTTATTAGAGAATATGGGCAACCAATGAGACTTATTGTGCTGCTACCTCCCTAGCAGTGACCCCTAGCAAAGGGCATTGCTGGCTTCCTGCAGCAGTTGTCTGTGGTGCAGGTGCAGCTAGCTCAGTGGAATCGGCCTAAATTATTTATTTTTAAGCGAAGCTGTGGAAAGGAACCTAAAGTACATATGCAATCAGAAACAATTGTTATGCTTCGGTTTTGTCTTTCTTTATAACACAAGTAACTCATTTGATGTTTCCTTTCTTCATTCTGAAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAAAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGTAGGATCTTGTTTCCAAATTTTTTCCATGGATTAAGTGCCATTTGTCTCAATTGAGCTGTTATGTGATGTCAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATCAGACTGGAATTGCTGATGATGATGTGAGCACCTGATTCCAAGTAGTGTGATTTCCAACCTTTCACTCCCAGTAGATTTTCTGAAGTTTTGTCTTTTCCTGTAGGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTATCTTTTTGGTCCATATCAACAAAAAAACTTGTGCTATCTGTTCACCTATACAATGATCGGTGATGACCTACACTTCTGCAGGTTACTGAGGCTGATATTGAAGAATTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGTGGCTTACAAAATTTAGTGTTGATTAATTTTCTATACAGAAGGCAATGAATTGCAAGTGAATAATTGGGTTCCATTTCTATTTTAATTTGGTGCCCTTGTATGCAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTAAATGATTATATGCTGTTGCCATATAATTTTATCATATAATATTGAATACCTTTTTCTATTCCTTTTCTACAATGAAGCGCTGGCAAAGTGTTTAGCTTATCATGCTAACTCAATCTATTCCCTGAAACTTCTCTAATGGTTAAACTCCTTTCCATTTCCTTCCCTTTTGTAGGTGAGCTGAAGTCAACAAAAGCATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCACAAACCCATTAGAGAGAAGAGTGAAGTAAGCTCTCATTCTCTTATCTCCCAAGTAATCCGCCTTCCGAGATGTTGTCTACCATCAGTTGCTCACTACTGCATTTGCCTCAAACCTCGTCACAGGAAGAACAAGAAGAAGAGCGAGGAGAACGATCTGATCCTCGCGATCTCACAGCGCAGGGCACAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAATGTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007728