BGIOSGA007739

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Revision as of 03:03, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007739| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007739, complete gene.| tag = P0026H0...")
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Gene Name

BGIOSGA007739

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007739, complete gene.

LocusTag

P0026H03.19

Ensembl Transcript ID

BGIOSGA007739-TA

Ensembl Protein ID

BGIOSGA007739-PA

Length

4229

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6402223..6406451

Sequence Coding Region

6402223..6402288,6402683..6402715,6402824..6402954,6403248..6403356,6403480..6403596
,6403970..6404035,6404388..6404450,6404533..6404577,6404765..6404826
,6405049..6405142,6405450..6405542,6405636..6405705,6405891..6405967
,6406051..6406108,6406210..6406241,6406320..6406451

Genome Context

<gbrowseImage1> name=IndicaChromosome02:6402223..6406451 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:6402223..6406451 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGTCACCGTGATGACCGCCGACGAGCAGATTCTCACCGTCGACGTCGACCCCGACGAATCTGTGGAGAATTTGAAGGCGCTTCTTGAGGTGGAGACTAGTGTGCCTTTGCGGCAGCAGCAGCTTCACTTCAATGGCAGGGAGATACAGAACACGGATAAACTTAGCACCGTCGGAGTCCAGGATGGCGATCTTGTGATGATGGTGAAGGTTACCTCTAATGAAAGGCCATCTCAGGATATTATAAGATTAAACCCTGATGGATCTGCTGTTGATCCTCAAGCTTTCCGACAACATATTCGAGGTGATTCACAACTTATGGGACAACTCCTTCAGAATGACCCGGCATTAGCACAAGCTATTCTTGGTGATGACATCAATGAGTTGCAAAATACCTTGCGGTCACGCCATCAACAAAGACTAGAACTAAAGCGCAAGCAGGAAGAAGAGCTTGCTCTAATGTATGCTGATCCTTTTGATGTTGAAGCTCAGAAGAAAATTGAAGCTGCAATTCGGCAGAAAGGTATTGATGAAAACTGGGAGGCTGCCTTGGAGCACAACCCTGAAGCATTTGCTCGAGTGGTTATGCTGTATGTGGACATGGAAGTCAATGGTGTACCTTTGAAGGCCTTTGTTGACAGTGGAGCACAATCAACTATCATATCAAAAAGCTGTGCCGAACGTTGCGGGTTGCTTAGGCTGCTTGATCAGCGATATAGAGGTGTTGCTATTGGCGTTGGTCAATCAGAGATTCTTGGTAGAATACATGTAGCCCCAATAAAGATTGGCCATGTCTTCTATCCTTGTTCATTCACAGTATTGGATGCTCCCAATATGGAATTTCTTTTTGGGCTTGATATGCTGCGGAAACATCAGTGCATAATTGACTTAAAAGACAATGTTCTTAGAGTAGGAGGTGGTGAGGTTTCAGTGCCCTTCTTACAAGAGAAAGACATCCCTTCACATATACGTGATGAAGAGAAACTATCGAAGCTAGCATCTCTCAGCCAAGGAGCTGCTGGAGAATCGTCAACGGCACGGGAGAAGACTCCTGATGCGCCACCACGAGCTCATACTACAGGTGCTCCAGCTGTGAATCCTCCGCAACCACAGGGAGGAGGAGATTTCGAAGCGAAAGTCACGAAACTGGTGGAACTTGGATTCGACCGGGCATCCGTAATCCAAGCTCTCAAGTTGTTCAACGGGAATGAGGAGCAGGCTGCTGCTTTCTTGTTTGGTGGTTAG</cdnaseq>

Protein Sequence

<aaseq>MKVTVMTADEQILTVDVDPDESVENLKALLEVETSVPLRQQQLHFNGREIQNTDKLSTVGVQDGDLVMMVKVTSNERPSQDIIRLNPDGSAVDPQAFRQHIRGDSQLMGQLLQNDPALAQAILGDDINELQNTLRSRHQQRLELKRKQEEELALMYADPFDVEAQKKIEAAIRQKGIDENWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGVAIGVGQSEILGRIHVAPIKIGHVFYPCSFTVLDAPNMEFLFGLDMLRKHQCIIDLKDNVLRVGGGEVSVPFLQEKDIPSHIRDEEKLSKLASLSQGAAGESSTAREKTPDAPPRAHTTGAPAVNPPQPQGGGDFEAKVTKLVELGFDRASVIQALKLFNGNEEQAAAFLFGG</aaseq>

Gene Sequence

<dnaseqindica>1..66#461..493#602..732#1026..1134#1258..1374#1748..1813#2166..2228#2311..2355#2543..2604#2827..2920#3228..3320#3414..3483#3669..3745#3829..3886#3988..4019#4098..4229#ATGAAGGTCACCGTGATGACCGCCGACGAGCAGATTCTCACCGTCGACGTCGACCCCGACGAATCTGTAAGCCCCCCCGCGCCGCCCTCCCACTCGTCTCGATCTCTGTAACTGGGGGGCGTCAATCAAGACGGGTTCCTTTTTGGGACAAATTCGGTTCATCTAGTGGCGGAATTCGTTGGGAATTCGGGTGCGGAGCGGGCGCATTTGAGTTGAGAGGCGGTCAGCGATTCAGTTCTTGTGGTGTGTTGGATCGTCTGTTGGTGTACGGATTGGATGGATCTTTGACAGGCTTCGGTTGTTTGGTTTGGTTTAGAGCGTCAGTCCCTTCGTCTTCCTCGTGCTCTTGGTATAATATGGTTGTAGAGCTAGATTTTGTAGAATACCTTGGAACTGAATTGTGGTTTAGAATGGGAAAGATGCAGTTTTTGGCTAAATTGTGCGTGCTGTGTTCTTGCAGGTGGAGAATTTGAAGGCGCTTCTTGAGGTGGAGGTGAGCTGGGACTGTAATCTTGTGTGAGCTATGTGTTTAAGGCTCTGCAGCTACTGGGTTTGATCTCACTGTTCTCACATTGTTGGTTTTTTGGCTGCTTGTGGACAGACTAGTGTGCCTTTGCGGCAGCAGCAGCTTCACTTCAATGGCAGGGAGATACAGAACACGGATAAACTTAGCACCGTCGGAGTCCAGGATGGCGATCTTGTGATGATGGTGAAGGTTACCTCTAATGAAAGGTCTGCTTGCTGGCATTCCTCGTGCATAAAAAGTAAATTGATTTGCATGACATATACTTGTAAAGTTTTTTAATTGAGTTACTTAAGAGTTTTACATTCCGAATTGAATTACTTAAGAGTTTTACATCCTTCAGTTCAATTCTGGTCTTACTGGCAGTTACCTCCTTTGTAGTTGTCCAGTATTACTTTTTGCGCAATAAAGGATTTTTAGTTTGTTAAAACTGATGCTATGAATCGCGATGCCACTAAGGTTTCTTTTCTCCAATTTAATTTGTCTGGGTTGAAAATTTCAGGCCATCTCAGGATATTATAAGATTAAACCCTGATGGATCTGCTGTTGATCCTCAAGCTTTCCGACAACATATTCGAGGTGATTCACAACTTATGGGACAACTCCTTCAGGTAAATTTTACTGGTAGCTTCATTACTTTGTGGCTAGACAGTTTATATACTTTAATGTGCTTAGATATCACTTGGGGCAAATATTTTCTTTTCTTATATCGGAAAACGGATATTTATTTGCAGAATGACCCGGCATTAGCACAAGCTATTCTTGGTGATGACATCAATGAGTTGCAAAATACCTTGCGGTCACGCCATCAACAAAGACTAGAACTAAAGCGCAAGCAGGAAGAAGAGCTTGTGAGTATCTACCACGAGATAGCATTACTTTTAAAGGAAGAATATTAAGGAGGCCCTTATATGTTACCATGTCTTTGGGAACTAAAGCTGAGATTGTGTGGTTTGTTCCTGCATGTTACTCACAGCACAGTTAAAGATTTTCTATTCTGCAGTCTTTTTATCTAAAAAATGATTTAGCCTTTCCTTGCATTTATATAAGTATATATCTCTATGATGTTTCGTGTGCATTGTATTTTCCAAAATTGCACTTTTGACTTATCTTACATATACTTCACCACTTCGAGGCTTGGTAGTTCATGATTTGTTGGTTGTGTTGTGTTACTGTCTTATTGATTAACGTTAGAAAATTCACTAATAAATGTGTGTTTTGCAGGCTCTAATGTATGCTGATCCTTTTGATGTTGAAGCTCAGAAGAAAATTGAAGCTGCAATTCGGCAGGTAAGCATATTTTTTTCTGAAACCTGTTGACCGCTAGGTGATGATTCCTTTCGCATATCAGTGGACAAGTGTGAGATATCATGAACATCATTACAATAGTGACTAGTGTTAAGGAGACATAAAGATTCTTTATTACAAAGTTAAGAATAAACAAGATAACTTAAATATAAATTTTTCTGGCTACCATGCTTGGATATAATGAATTGTTCGTCACAGCATTCTGTTTTTCTACAGTTAAAAAAGTACCTTTTCTGATTTCACTATGATTCATACTTTCTTCTCTACTCACCTGTTAGAATTTATCCAGTTAGATGTCTGATTATGATACTTTAATTTACTTGTCGCATTACAGAAAGGTATTGATGAAAACTGGGAGGCTGCCTTGGAGCACAACCCTGAAGCATTTGCTCGAGTGGTACGTTTTACCTTAGTTTTCTCCTGTTTTACGTTCTATGCTTTGTGATACTTGCTAACCAATTAGTATTCTGAGATATCAGGTTATGCTGTATGTGGACATGGAAGTCAATGGTGTACCTTTGAAGGTATTACTCTTTCACATTTATCCTATATAACCAACATACTGAGAATTAATGCATTCTGGTGAAATTTAAATATTTGAGAACTAATGTAGGCTTTTGCTGCTCTTTTTTTGGGTGCAATGTTTTAATTCTTCTCACTGATTGTAAGGATATGTTTAATGTTCCATTGTTTTTTTTTTTTCATCTTCAGGCCTTTGTTGACAGTGGAGCACAATCAACTATCATATCAAAAAGCTGTGCCGAACGTTGCGGGTACACTTGCAATTTAAGATATTGGTTGATTGGAATTATTTAAACTTTTATAGTTTGTATAGTAATTCTGCATGGGAAGACATAAATATTGAATAGCTTACTTTAACATTTTTCTCTGAGACGGGAGAAACTAAATCAGTTTCTCTTGATACTCAACTGAAATGTACACCATTGCATATTTACATATTGTGTATACATCTGACAAAGAAATATCATATGCAGGTTGCTTAGGCTGCTTGATCAGCGATATAGAGGTGTTGCTATTGGCGTTGGTCAATCAGAGATTCTTGGTAGAATACATGTAGCCCCAATAAAGGTATGTTTGATTGATTCATGTACCCATGCCACTGATATTACAGTGTGAGAGAATATATTATTTATATGATACAAAATTCATCACCTGGGTAGAAAACATGAAATTCCAGGTCCCATAGAAACCATGTGACAAGTCCTAGTATAACCCAAGTCTTTGGTGTTCCTTTAGAACCTAGCGATTTCAGTTATTCTCATACCTCTACAAACTTCAATGGTTTTGCAATTTGTGAATCGTGATATGTAATTCCGTACTAATTGTTTAGCAGAAGTAGTTTGTAATGTAAATACTGACAGCTTGATTTGGACAGATTGGCCATGTCTTCTATCCTTGTTCATTCACAGTATTGGATGCTCCCAATATGGAATTTCTTTTTGGGCTTGATATGCTGCGGAAACATCAGGTAATCGTGTGACTAAGATCTGGTACATGCTGTTGCATCTAAATCTGATAGTCTGATTACACTTCTTACTGATTCTTTTGTTATCTCACACAGTGCATAATTGACTTAAAAGACAATGTTCTTAGAGTAGGAGGTGGTGAGGTTTCAGTGCCCTTCTTACAAGGTAAGTAATTTTGTATCAACAATGCATTCCATTTTTATAAATGTAGTTTTCATGAAGGTTTACTGAAATAAAGCTACCAAAGAAGTTAATTTTTATAGTTCCCTCCTCCTAGACTTTCATCTGGTTATATACTTATGCAGTTTTATAAATTTAGTTCTTCAACCACTCTGCTATTCTATCTTCAGAGAAAGACATCCCTTCACATATACGTGATGAAGAGAAACTATCGAAGCTAGCATCTCTCAGCCAAGGAGCTGCTGGAGTAAGCTAAATTAGCTTTTGCTTTTTTTCCTTGAATTGTGATTTGTAACATCAAAATATCCTTATTTACTCCATCTTATCCAGGAATCGTCAACGGCACGGGAGAAGACTCCTGATGCGCCACCACGAGCTCATACTACAGGTTAGTTTGCTTTTGCTCTGGTAGGTCTAGGACTGCGTAATCTATGCCATCTGACAACTTCGAGCTAATGAGAAACCTCCATCTTTTCATTTTCTTTCCAGGTGCTCCAGCTGTGAATCCTCCGCAACCACAGGTAGTCGAGATCTCTTTTATTTTTGTTAAACTTTTGTGCATCAAATTGATTCTGACTGTCTATAAAAACATCTACCAGGGAGGAGGAGATTTCGAAGCGAAAGTCACGAAACTGGTGGAACTTGGATTCGACCGGGCATCCGTAATCCAAGCTCTCAAGTTGTTCAACGGGAATGAGGAGCAGGCTGCTGCTTTCTTGTTTGGTGGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007739