Os12g0572000

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0572000| Description = Similar to Rough sheath 2| Version = NM_001073621.1 GI:115489203 GeneID:4352588| Length = 5517 bp| Definition = Ory...")
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Gene Name

Os12g0572000

Description

Similar to Rough sheath 2

Version

NM_001073621.1 GI:115489203 GeneID:4352588

Length

5517 bp

Definition

Oryza sativa Japonica Group Os12g0572000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23758685..23764201

Sequence Coding Region

23758891..23759263,23759613..23760268

Expression

GEO Profiles:Os12g0572000

Genome Context

<gbrowseImage1> name=NC_008405:23758685..23764201 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23758685..23764201 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagccgccgccgatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccgccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccgcgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaaggttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaagtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtgggaggtgttcaaggagaagcagcagcgggagctccgggatcgggatcgccggcgactcccgccgccgctggacggcgacgagcgcggctgcgccggcgggcgatacgactggctcctcgaggacttcgccgacaagctcgtcaacgaccaccaccgccgaatgatggctgccccgatcctcccgccgtggatgtcgtcgtcgccgtcgtcttcttcctcgccgtcggtgacgcttagcctcgcgtcggcggcggtggcgccggcgcctgcggcgccgccgccgacgtggggtggtggtggaggaggggaggtggtggtggcggagttgatggagtgttgcagggagatggaggaagggcagagggcgtgggcggcgcacaggaaggaggcggcgtggaggatgaagagggtggagatgcagctggagacggagagggcgtgccggcggcgggaggcgacggaggagttcgaggcgaagatgagggcgctgagggaggagcaggcagctgcggtggagcgggtggaggcggagtaccgggagaagatggccggcctccgccgcgacgcggaggccaaggagcagaagatggcggagcagtgggcggccaagcacgcccgcctcgccaagttcctcgaccaggtcgccgcctgccgccgctggccgcccgtagagatcaacggcggcggcggcggcggccccggcggcggccggtga</cdnaseq>

Protein Sequence

<aaseq>MQPPPMRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLH RDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLG KWWEVFKEKQQRELRDRDRRRLPPPLDGDERGCAGGRYDWLLEDFADKLVNDHHRRMM AAPILPPWMSSSPSSSSSPSVTLSLASAAVAPAPAAPPPTWGGGGGGEVVVAELMECC REMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREATEEFEAKMRALREEQAAAV ERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQVAACRRWPPVEINGGG GGGPGGGR</aaseq>

Gene Sequence

<dnaseqindica>4939..5311#3934..4589#ctcgctgctccttgtcccccacctcctttacttgagcttgctcaccactgcctccatatacagagagtcttctctgtatttctctctctcagtgggaggctcacaagaatctttcagctcacatctcactgtccttgcctttctctagctaggtactactactgctagtactaaccactgctcgtgttcttgggacttcttcttcttcttgttcttgttcttaaaatcatttggggttttgagctccagggaggtccaagaacagagcagcaggatggtgcagtggcgtttctgtaagtgaatcctactaccttcagtttcttgagcagtttcagtagtgtagagcttatgatgtaatgcagcaggtgccatgtgtgttgtgctctgaagaaagctgttctgtgggttgctttgttactatgttttttgtgttcatgtttcttggtctgtatggctctacatgttgggtgtttttggtcagattttgtctctcctatatctgctagtctgtttttctgcaatagatctttctgttagatttcttgtcttgtagggaagttggtagaggatgtgctctcagggtaaggattgattgtcagtttgcttagttctttcttttgattcaccagttgggatttagttagtatggatagataatctgctaggttggggttaaatgttgcctctgatatggtgagtgaaactacttttgtggattttgtatggattgtggttagtgggtgaaatttgtgttcttgattgaaacatctacctagttcttgaatcttcaatggcagcattattgtactgattgttgtatggtccaataatgtatttagggggattctacttactgctagtctgctcccagatatgaagatttgattctgttttttttcctcttcaaatgtttcttttttataattagttgaaatatgctattatccagagtacttttgggggtttatggattgtttcctcctactcaagagaggtaaacaaagtaacttcttcagtacagattttccagagatgccatttcttcttcatcattcctcctttgattacttcatgattgtttttacctgcttctcagcccatatcccttggaacattcacttccatgaaaattaccacctaaggaaaaaaaaacaaaatggtcagtaattgagaacttgctatattagttacctgaaagatagtaacacccagcaacacagatccatgtttcagtatacttgtggtataggagtagtatagtatagtatacccccacactgctttcaatttgtcagtactactactgtggtagtaacatctagccaaggaggatacaacggtccaatccaatcagatcaacaaacaacaacacattgatttctttggcctactaccatgctttcaacattctttcattttgtttcttcttggttaatgcttgaatttctagatgaaatggatggcacaagaccactcttgaggaatcctaagtttcctataaatcccttttataaatacttttttttagaaacaactgttttgtctcaacttaaaaaaaataaaatcaaaagcatattgcttgcaagaattcagaagatgttctaggtgaaattcttgcagattttattgcatttctctctcatgagtccttcattacaattaggtgaaaactaaagaggtgccatattaaatagagtgaatttattgcaaattaaattggttttcgatttgtcaaatttgctcgagacacctaaccaactaacccttattgtccaaatcaaaattccatctcgtgcgcaattagccctggccatagctttaattcgtcattagtaggcaaccagtgggggctccaaatggtcctagaatcatcacttttactttggatttgcttctgcctcttgcacattcccttattttgtagccttcttgagggtattaggtaggtgttttggcagattatctccccattgatcagctcccaattaatgccagatggtgacactgctaaagatggaagacaagcttgcgagaaaacagtggtagccttattatttcctctcacaagaattgtgcccacaacttgtcctgacatctgtgaatttgtctgtatgttgatagtaatagctggatgaatcatgggtgcttaacaatgctcttacttaccaatagtgtttatggtcggttggcccttgcaacctccaaagaaccaattggagcaattcagccttctcttttttttttctctctctgtcattttctgtgctttaactgttatctgaacgagtagttaactgtataatgtcaaaggaataatcttgcacaaatttagtaccaatgttgttgtagaggagcatgtataagctttatctgtggtactgtggtagtaagtaggatgtgtagagtgtgcaggtcacagttatggatcactgaacaaataaattaactcccctgcttttgacaccccaaactgaaacatataaatgctgcaatgaataaagcaactaactttacactatcacagccctagcttctgttctggccagtttcttgctccctccagacggtaatcactttactctgtatcaacatttgcatttaaactggttgtggttgactggttgtttgactagattagcacaactagaaaccatgccaagccattcctgatctgcagtgtgtcgtttctttcttctgaactgaagatttgatcttttctgtttgcaaagttcatgcttacacacttactacacttgaaatctgtaagataagtgctctacattgaactaaaaatacgtaaattttttgtacatgatctgatttctcatgtgcttgttttcctcttagctaatgacttttatcttttctgttgtagaaattagaatccatgctcatttaccattgtaagatgaaatcctacattgagccaaaaatctaactttcttttctttttgtttgtacatgacctcgtcctctatttggatgaagatttcacctttgctactaatagacgagccttgcaaacaggctaaagaaatgatcttttttttttatttgagtaaatttcagaaatctacaactatttgggtcaaaactatcaatttgctacacgtcatactcatgcatacatgccaagttcacacgcacgcacaactggttacagttgcagaacttgcagtttaatgataaaatcgtttgatatagttacaacagttttgcgaaatgttcgccttaatcttatagaaaagcgatacctttgaccaaataactacagctttctgaaatttactcctttatatatattttgcatcacgagaaacaattttaatcacttaggtggatatctactcatttgttgcatgtgaacaaaatgaatatgaaaaaaaaaataaaaagaataattaatacacgtatattcacagatgaatttgttttttttgttataacttgtatatttcatattaatctatctcgttaatttttttatattatttatttgacatgcaataaatggacgaacatccacccgagcgattacaatcctctccaccaacatacaagtttaaattcaacttctataaattgtaacaaaaataacaaatttaactccaataagtatatgcatattcacaaatgaatttattaattttgttataacttgtagaagtcgaatttaaaattgcatgtttgtggggtgatatatttcatattaatctatcttatcaacttttctgaattttttttcaataaacgggcgaacatccaaccgagcgattacaatcctctctcttggtagctaactaaagaagtgatcttcttcttcttcttcttcatcttgcatgacttctcacgacaatggcggcgcgcgggtgcaggagagcagcatgagtactcgcaccaccgagctgggatggtcggcgatggcgaacaccgatgcagccgccgccgatgagggagaggcagcggtggcggcctgaggaagacgccatcctcctcgcctacgtccgccagtatgggccccgggagtggagcctcgtgtcccagcggatgaaccgccccctccaccgcgacgccaagtcctgcctcgagcgctggaagaactacctccgcccggggatcaagaaaggttcgctcaccgacgacgagcagcgcctcgtcatccgcctccaggccaagcacggcaacaagtggaagaagatcgccgccgaggtccccggccggacggcgaagcggctgggcaagtggtgggaggtgttcaaggagaagcagcagcgggagctccgggatcgggatcgccggcgactcccgccgccgctggacggcgacgagcgcggctgcgccggcgggcgatacgactggctcctcgaggacttcgccgacaagctcgtcaacgaccaccaccgccgaatgatggctgccccgatcctcccgccgtggatgtcgtcgtcgccgtcgtcttcttcctcgccgtcggtgacgcttagcctcgcgtcggcggcggtggcgccggcgcctgcggcgccgccgccgacgtggggtggtggtggaggaggggaggtggtggtggcggagttgatggagtgttgcaggtgcttgaaatcttttgctccctacgtttttaaatatttaatactctttgatttttctaaaaaaaaatatttaaccgctcattttattttttaaaaaattaattattaattttgttcctatcatttcattcatttacttatatttattaaatatacttatatgtatactacatatagttttacatatttcacaaaaatttttaataaaacaaatatttaaacatataattaaaaagttaacggcgttaaatgggggatttcttcatctcattcgtcttctttgacccactatcatcgattggatctcctcttttatgtgtcgtcgcttgactcgcatctattgttgcagggagatggaggaagggcagagggcgtgggcggcgcacaggaaggaggcggcgtggaggatgaagagggtggagatgcagctggagacggagagggcgtgccggcggcgggaggcgacggaggagttcgaggcgaagatgagggcgctgagggaggagcaggcagctgcggtggagcgggtggaggcggagtaccgggagaagatggccggcctccgccgcgacgcggaggccaaggagcagaagatggcggagcagtgggcggccaagcacgcccgcctcgccaagttcctcgaccaggtcgccgcctgccgccgctggccgcccgtagagatcaacggcggcggcggcggcggccccggcggcggccggtgagccgccggacggtggcgctgcatgcatgcgtagttggacacctcgctttcttgcttcttcttctcgtgtcctttttacaactgttggaattcacttctctctagaaatatgtaatcttttgagtctcttttgatcattccaagtttcctactagtagctctattgaataataaatggaccaccaaattgcaaaccaaaatggttac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0572000, RefSeq:Os12g0572000