BGIOSGA007789

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Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007789| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007789, complete gene.| tag = OsI_063...")
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Gene Name

BGIOSGA007789

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007789, complete gene.

LocusTag

OsI_06374

Ensembl Transcript ID

BGIOSGA007789-TA

Ensembl Protein ID

BGIOSGA007789-PA

Length

3760

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7466418..7470177

Sequence Coding Region

7466418..7467480,7468223..7469536,7469969..7470177

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7466418..7470177 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7466418..7470177 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGACCGGGTTCTCTTTCTTGCTCGCGCTGCTGCTCCCTGCAACTGCTGTTCCACCAGCTCCCATGACAAGAGCTCAGCCTGCCACCGACCACCTTGCACTGATGGCCTTCAAGTCGCAAATAACCCGTGATCCATCGTCAGCATTGGCCTTGTGGGGTGGCAACCAATCGCTCCATGTCTGCCAATGGCGAGGCGTGACGTGCGGAATCCAGGGACGCCGCCGTGGCCGTGTGGTGGCGCTGGACCTCAGCAACCTTGATCTTTCTGGCACCATTGATCCTTCCATAAGCAACCTCACCTACCTGAGAAAGCTTGATCTCCCTGTGAATAATCTAACTGGTAACATCCCTTCAGAGCTTGGTCGTCTTCTTGACCTCCAGCATGTCAACCTGAGCTATAATTCTCTGCAAGGTGACGTTCCGGCATCACTGTCACTATGCCAGCAGCTTGAGAACATCAGTCTGGCATTCAACCACCTCTCAGGAGGAATGCCTCCAGCCATGGGTGATCTGTCCAAACTCCGCATAGTCCAGTGGCAGAACAACATGCTTGATGGGAAGATGCTTCGTACGATAGGCTCATTGGGCAGCTTAGAGGTCCTTAACCTCTACAACAACAGCCTTGCAGGAAGCATCCCGTCAGAGATTGGAAACCTCACCAGTCTAGTAAGTCTTATCCTGAGCTACAATCACTTGACAGGTTCAGTTCCTTCTTCTCTTGGTAACCTTCAGAGGATCAAGAATTTGCAACTGAGGGGGAACCAACTTTCAGGGCCAGTTCCAATGTTCTTGGGGAACCTATCTTCACTAACCATTCTTAATCTTGGTACTAACATATTTCAGGGGGAGATTGTGCCATTGCAAGGACTGACATCTCTGACTGCCCTAATTTTGCAAGAAAACAACCTTCATGGTGGCATCCCTTCTTGGTTAGGAAACCTCTCTTCCCTAGTGTACCTAAGCTTGGGAGGGAACAGATTAACTGGAGGTATTCCTGAATCATTAGCAAAACTTGAGAAGTTATCTGGACTTGTTCTTGCTGAAAACAATCTTACAGTGGACCTCTGCCATCCAGTCTTAGAAATTGTACTTTACAAAAAATTGATATTTGATATTCAGCACAATATGCTCCACGGTCCAATTCCGAGGGAGATTTTTCTCATATCTACCCTGTCTGACTTCATGTACTTCCAAAGCAACATGTTCATTGGGTCAGTACCATTGGAAATCGGTAACTTAAAAAACATTGCAGACATCGATTTGTCTAATAACCAAATTTCTGGTGAGATTCCTCTATCTATTGGTGATTGTCAAAGCCTGCAATATTTTAAGTTACAGGGGAACTTCCTTCAAGGGCCAATCCCAGCATCAGTGAGTCGGCTGAAAGGTCTTCAAGTACTTGATCTTTCACACAACTACTTTTCTGGAGACATTCCCCAATTCCTAGCAAGCATGAACGGCCTTGCTAGTTTGAACCTCTCATTCAACCATTTTGAAGGGCAGGTTCCTAATGATGGGATATTTCTCAATATAAATGAAACTGCAATTGAAGGGAATAAAGGCTTGTGTGGGGGTAAACCTGATTTGAATCTGCCTCTTTGCTCCACTCACTCCACCAAAAAGCGGTCTTTGAAGCTTATCGTAGCAATTGCCATAAGCAGTGCAATCCTATTGCTTATCTTGCTTTTAGCACTATTTGCATTCTGGCAAAGGAGTAAGACACAAGCAAAATCTGACTTGTCACTTATCAATGATTCGCATCTAAGAGTATCTTATGCTGAATTAGTCAATGCAACAAATGGTTTTGCTCCTGAGAACCTCATTGGAGTAGGAAGCTTTGGATCAGTGTACAAAGGACGAATGACGATCCAAGAACAAGAAGTAACTGCTGCAGTTAAAGTGCTGAATCTCCAACAGCGTGGGGCTTCTCAAAGCTTCATTGCAGAATGTGAGGCTCTGAGATGTGTTCGGCGTCGAAATCTTGTGAAGATCCTGACAGTCTGCTCAAGTATTGATTTTCAGGGCCATGACTTCAAGGCTCTTGTATATGAGTTCCTACCAAATGGAAATTTGGACCAATGGCTACACCAGCATCTTGAGGAAAATGGGGAAGACAAGGTTTTAAATATCATCAAAAGGCTCGACATTGCCATTGATGTGGTTTCTGCACTTGATTACCTTCACCAACATAGGCCATTGCCAATTATTCACTGTGATCTCAAGCCAAGCAATATTCTCCTAGATGGTGAAATGGTTGCCCACGTTGGTGATTTTGGGCTTGCAAGAGTCCTGCATCAAGACCATAGTGACATGTTAGAGAAATCAAGTGGCTGGGCTACAATGAGAGGAACAATTGGATATGCTGCTCCAGACCAACACTTACTATCAAAGAACAACGATGGAGGAGAAAGAAACTCAGACGGCAAAAGAACAAGAGACACAAGAATAGCCTGCATCACTTCAATTCTGCAGATTGGAGTTTCCTGCTCAAATGAATCTCCAGCAGACCGCATGCATATCAGAGATGCTTTGAAAGAGTTGCAGAGAACAAAAGACAAGTTTAGCATGTCCCTGCATTGA</cdnaseq>

Protein Sequence

<aaseq>MVATGFSFLLALLLPATAVPPAPMTRAQPATDHLALMAFKSQITRDPSSALALWGGNQSLHVCQWRGVTCGIQGRRRGRVVALDLSNLDLSGTIDPSISNLTYLRKLDLPVNNLTGNIPSELGRLLDLQHVNLSYNSLQGDVPASLSLCQQLENISLAFNHLSGGMPPAMGDLSKLRIVQWQNNMLDGKMLRTIGSLGSLEVLNLYNNSLAGSIPSEIGNLTSLVSLILSYNHLTGSVPSSLGNLQRIKNLQLRGNQLSGPVPMFLGNLSSLTILNLGTNIFQGEIVPLQGLTSLTALILQENNLHGGIPSWLGNLSSLVYLSLGGNRLTGGIPESLAKLEKLSGLVLAENNLTVDLCHPVLEIVLYKKLIFDIQHNMLHGPIPREIFLISTLSDFMYFQSNMFIGSVPLEIGNLKNIADIDLSNNQISGEIPLSIGDCQSLQYFKLQGNFLQGPIPASVSRLKGLQVLDLSHNYFSGDIPQFLASMNGLASLNLSFNHFEGQVPNDGIFLNINETAIEGNKGLCGGKPDLNLPLCSTHSTKKRSLKLIVAIAISSAILLLILLLALFAFWQRSKTQAKSDLSLINDSHLRVSYAELVNATNGFAPENLIGVGSFGSVYKGRMTIQEQEVTAAVKVLNLQQRGASQSFIAECEALRCVRRRNLVKILTVCSSIDFQGHDFKALVYEFLPNGNLDQWLHQHLEENGEDKVLNIIKRLDIAIDVVSALDYLHQHRPLPIIHCDLKPSNILLDGEMVAHVGDFGLARVLHQDHSDMLEKSSGWATMRGTIGYAAPDQHLLSKNNDGGERNSDGKRTRDTRIACITSILQIGVSCSNESPADRMHIRDALKELQRTKDKFSMSLH</aaseq>

Gene Sequence

<dnaseqindica>1..1063#1806..3119#3552..3760#ATGGTGGCGACCGGGTTCTCTTTCTTGCTCGCGCTGCTGCTCCCTGCAACTGCTGTTCCACCAGCTCCCATGACAAGAGCTCAGCCTGCCACCGACCACCTTGCACTGATGGCCTTCAAGTCGCAAATAACCCGTGATCCATCGTCAGCATTGGCCTTGTGGGGTGGCAACCAATCGCTCCATGTCTGCCAATGGCGAGGCGTGACGTGCGGAATCCAGGGACGCCGCCGTGGCCGTGTGGTGGCGCTGGACCTCAGCAACCTTGATCTTTCTGGCACCATTGATCCTTCCATAAGCAACCTCACCTACCTGAGAAAGCTTGATCTCCCTGTGAATAATCTAACTGGTAACATCCCTTCAGAGCTTGGTCGTCTTCTTGACCTCCAGCATGTCAACCTGAGCTATAATTCTCTGCAAGGTGACGTTCCGGCATCACTGTCACTATGCCAGCAGCTTGAGAACATCAGTCTGGCATTCAACCACCTCTCAGGAGGAATGCCTCCAGCCATGGGTGATCTGTCCAAACTCCGCATAGTCCAGTGGCAGAACAACATGCTTGATGGGAAGATGCTTCGTACGATAGGCTCATTGGGCAGCTTAGAGGTCCTTAACCTCTACAACAACAGCCTTGCAGGAAGCATCCCGTCAGAGATTGGAAACCTCACCAGTCTAGTAAGTCTTATCCTGAGCTACAATCACTTGACAGGTTCAGTTCCTTCTTCTCTTGGTAACCTTCAGAGGATCAAGAATTTGCAACTGAGGGGGAACCAACTTTCAGGGCCAGTTCCAATGTTCTTGGGGAACCTATCTTCACTAACCATTCTTAATCTTGGTACTAACATATTTCAGGGGGAGATTGTGCCATTGCAAGGACTGACATCTCTGACTGCCCTAATTTTGCAAGAAAACAACCTTCATGGTGGCATCCCTTCTTGGTTAGGAAACCTCTCTTCCCTAGTGTACCTAAGCTTGGGAGGGAACAGATTAACTGGAGGTATTCCTGAATCATTAGCAAAACTTGAGAAGTTATCTGGACTTGTTCTTGCTGAAAACAATCTTACAGGTAGCATTCCTCCATCCCTAGGAAATCTTCACTCTCTTACAGATTTCTATCTAGATAAGAATCAGCTCACTGGGTACCATTCCTTCTTCCATTTCCAATCTGTCCTCTCTCAGAATATTTAATGTACAGTTTAACCAGCTAACAGGATCATTACCAACTGACAACGGAGTCAACTTCCCATTACTTGAAATATTTAATGCAGGGTACAATCAATTCCAGGGTGCCATTCCAACTTGGATGTGCAACTCTTCTATGCTTAGCTCATTTGCAATAGAAATGAATATGATTTCAGGAACAGTTCCTCCTTGCGTTGATCACCTAAACAGTTTGTCAGTTCTGACCATTGAAAATAATCAACTCGAGGCAAATAACATTACGGTTGGGAATTCCTTTCTAGTCTAACTAATAGTAGTCAGTTGAAAATTTTAGATTTCAGCAGCAACAAATTTCGAGGGACTCTACCAAATGCAGTAGCCAATCTTTCTACAAATCTGAAAGCTTTAGCCCTAAGCGAAAATATGATAAGTGGCCATATCCCTGAAGGAATTGGAAATCTTGTTAATTTATTGTACCTTTTCATGAGCAACAATTCTTTCGAGGGTAATATTCCTAGCTCACTCGGTACACTCCGGAAGCTGAGTCATTTAGACCTTGGATTCAATAATTTATCGGGCCAAATTCCACCTGCCCTTGGTAATCTCACATTGTTGAATAAACTCTATCTTGGACAAAATTCACTTAGTGGACCTCTGCCATCCAGTCTTAGAAATTGTACTTTACAAAAAATTGATATTTGATATTCAGCACAATATGCTCCACGGTCCAATTCCGAGGGAGATTTTTCTCATATCTACCCTGTCTGACTTCATGTACTTCCAAAGCAACATGTTCATTGGGTCAGTACCATTGGAAATCGGTAACTTAAAAAACATTGCAGACATCGATTTGTCTAATAACCAAATTTCTGGTGAGATTCCTCTATCTATTGGTGATTGTCAAAGCCTGCAATATTTTAAGTTACAGGGGAACTTCCTTCAAGGGCCAATCCCAGCATCAGTGAGTCGGCTGAAAGGTCTTCAAGTACTTGATCTTTCACACAACTACTTTTCTGGAGACATTCCCCAATTCCTAGCAAGCATGAACGGCCTTGCTAGTTTGAACCTCTCATTCAACCATTTTGAAGGGCAGGTTCCTAATGATGGGATATTTCTCAATATAAATGAAACTGCAATTGAAGGGAATAAAGGCTTGTGTGGGGGTAAACCTGATTTGAATCTGCCTCTTTGCTCCACTCACTCCACCAAAAAGCGGTCTTTGAAGCTTATCGTAGCAATTGCCATAAGCAGTGCAATCCTATTGCTTATCTTGCTTTTAGCACTATTTGCATTCTGGCAAAGGAGTAAGACACAAGCAAAATCTGACTTGTCACTTATCAATGATTCGCATCTAAGAGTATCTTATGCTGAATTAGTCAATGCAACAAATGGTTTTGCTCCTGAGAACCTCATTGGAGTAGGAAGCTTTGGATCAGTGTACAAAGGACGAATGACGATCCAAGAACAAGAAGTAACTGCTGCAGTTAAAGTGCTGAATCTCCAACAGCGTGGGGCTTCTCAAAGCTTCATTGCAGAATGTGAGGCTCTGAGATGTGTTCGGCGTCGAAATCTTGTGAAGATCCTGACAGTCTGCTCAAGTATTGATTTTCAGGGCCATGACTTCAAGGCTCTTGTATATGAGTTCCTACCAAATGGAAATTTGGACCAATGGCTACACCAGCATCTTGAGGAAAATGGGGAAGACAAGGTTTTAAATATCATCAAAAGGCTCGACATTGCCATTGATGTGGTTTCTGCACTTGATTACCTTCACCAACATAGGCCATTGCCAATTATTCACTGTGATCTCAAGCCAAGCAATATTCTCCTAGATGGTGAAATGGTTGCCCACGTTGGTGATTTTGGGCTTGCAAGAGTCCTGCATCAAGACCATAGTGACATGTTAGAGAAATCAAGTGGCTGGGCTACAATGAGAGGAACAATTGGATATGCTGCTCCAGGTATGCTTCTAACAGCTACAATCCTCTGTTTTCTTTCTAATTTATTCAGAAACCTTTCCATTGATCCATACTTAACTAGATCGTTTTGCTATTCAGATGTGTGCAATTTCTTATGAAAAAACTCAAATTCTTGCAAATGATAATTATGCAGCAGTGCAAATTTATAAATATATTATTAGACTGAAGCCTACATATAATTTTAAATATGAATGCTTAAACTTGCAACAATTTCCTTTATGCAACATTTTCTTATGATTACAGAGTACGGTTTGGGCAATTAGGTTTCAATTCTGGGTGATGTCTACAGCTATGGTATACTGTTGCTGGCGATGTTTACCGGAAAAAGACCAACTGGCACTGAATTTAGAGAAGCTCTCAGCCTTCATAATTATGTAAAGATGGCACTTCCAGACAATGTGATCAATATTGCAGACCAACACTTACTATCAAAGAACAACGATGGAGGAGAAAGAAACTCAGACGGCAAAAGAACAAGAGACACAAGAATAGCCTGCATCACTTCAATTCTGCAGATTGGAGTTTCCTGCTCAAATGAATCTCCAGCAGACCGCATGCATATCAGAGATGCTTTGAAAGAGTTGCAGAGAACAAAAGACAAGTTTAGCATGTCCCTGCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007789