BGIOSGA007797

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Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007797| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007797, complete gene.| tag = P0027A0...")
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Gene Name

BGIOSGA007797

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007797, complete gene.

LocusTag

P0027A02.7

Ensembl Transcript ID

BGIOSGA007797-TA

Ensembl Protein ID

BGIOSGA007797-PA

Length

6896

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7549323..7556218

Sequence Coding Region

7549323..7549559,7550142..7550287,7550463..7550565,7551304..7551490,7551596..7551689
,7552169..7552322,7552630..7552734,7552816..7552932,7553127..7553240
,7553771..7553953,7554087..7554366,7554445..7554566,7554643..7554740
,7554821..7554998,7555319..7555433,7555536..7555603,7555705..7555782
,7555866..7555940,7556036..7556218

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7549323..7556218 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7549323..7556218 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGAGCAGAGCGCGGAGCAGTTCAGGGGCCAGGCGAGGCTCCCGGGGTTCGCGGCGCCCCGGCGGTACGACCTGCGGCTCGTCCCCGACCTCGACGGGTGCGCCTTCACGGGATCGGTGGACGTCTCCGTCGACGTCACGGCGCCCACCAGGTTCCTCGTGCTCAACGCCGCCGAGCTCGAGGTCTCCCCCGGGGGCGTCCAGTTCAAGCCCCATGGCGCCGAGCAGGAGCTGCACCCAGCGGAGGTTACCAATGTGCCAGAGGATGAGATCCTGATTATCCGCTTCAATGAGGTTCTTCCTGTAGGGGAGGGAACTTTAGTAATTGCATTCAAGGGAACTCTGAACGACAAGATGCATGGCTTCTACAGAAGTGTGTATGAACTCAATGGGGAGAAGAAGAACATGGCGGTAACCCAGTTTGAACCTGCTGACGCAAGGCGTTGTTTTCCTTGTTGGGATGAGCCCTCTTTTAAGGCTATATTCAAAATTACTATAGAAGTTCCGTCTGAGACCGTTGCATTGTCAAACATGCCAGTGGTTGAAGAGAAGGTCAATGGCCTTATCAAAGCTGTCTATTTTCAAGAAACACCAATAATGTCAACATACCTAGTGGCTGTTATTGTTGGCATGTTCGACTATGTGGAAGCTTTCACCACTGATGGCACTAGGGTTCGTGTTTACACTCAAGTTGGCAAGAGTGCCCAGGGAAAGTTTGCACTAGAGGTTGCTGTGAAGACACTGGTCCTCTTCAAGGAGTATTTTGCTGTGCCATACCCACTCCCAAAAATGGACATGATTGCCATTCCTGATTTTGCCTCTGGAGCAATGGAGAACTATGGCTTGGTTACATATCGTGAAACAGCTTTGTTATTTGATGAGAAACACTCTGCAGCTGCGAATAAGCAAAGGGTTGCAGTTGTGGTAGCCCATGAATTAGCTCACCAGTGGTTTGGAAATCTTGTGACGATGGAGTGGTGGACACACCTATGGCTTAACGAGGGTTTTGCGACATGGGTCTCCTACTTAGCTGCAGACAATTTCTTTCCTGAATGGAATGTTTGGACCCAATTTCTTGAGGAATCTACAACAGGTTTCAAGTTAGATGCCCTTGCAGGGTCACATCCAATTGAGGTCGACGTAAATCACGTTGATGAAATAGATGAAATATTTGATGCTATAAGCTACAGGAAAGGAGCTGCTGTTATTCGGATGCTGCAAAGCTATCTTGGGGCTGAAACTTTTCAGAAATCTCTGGCCGCATACATCGAAAAGTTCGCATATTCAAATGCCAAGACTGAGGACTTGTGGGCTGCCCTTGAAGAGGGGTCTGGTGAACCAGTGAAAACATTAATGCATTCATGGACAAAGCAGCAAGGGTACCCTGTTGTTAATGTGAAGCTCAAGGATGGAAAGCTAGAGATGGAGCAGACACAGTTCCTATCAAGCGGGGCTGAAGGAGTTGGGCAATGGGTGGTTCCCATCACACTGTGTTGCTGTTCGTACTCACGTCAAGAGAAGTTCCTTTTTAATGGAAAGCAAGAGGATTTTAATTTGTCAGGGCTTGTAGAATGTCAAAAGAAAGAAGACTTCTGGATTAAACTTAATGTCAATCAGACTGGCTTCTATAGAGTGAGCTATGATGAGGAACTTGCATCTCGACTTAGATATGCAATTGAAGCCAACAAACTGAGTGCAGCAGACAGATATGGTGTACTTGATGACACATATGCCCTCTGTATGGCTGGCAAACAGAAGCTAGTCTCCTTATTGCATTTGATTGCTGCGTACAAGGATGAAACCGAGTATACTGTGCTCGCCTGTGTCATAGATACAAGTCTGAGCATTGTCGAGATGGTGGCTGTTGCTGCTCCTGAGGGGTTGGGCAAGCTGAAAAAGTTCCTGATTGACTTTCTTGAGCCATTTGCACAGAGAATTGGTTGGGATGCTAAAAGCGGTGAGGGTCACTTGGATGCATTATTGAGAGGTACACTTTTAACTGCTCTGGCAGAACTTGGCCATGAAGCTACAATAAATGAAGCTGTACGCCGATTTAACATCTTTGTGGAAGATAGAGAAACACCACTACTCCCTCCAGATGTTCGAAAGGCGGCATATGTTGCTTTGATGCAGACAGTGAACAAATCAAACAGAGCCGGCTATGAATCACTATTGAAGATCTATAAAGAAACTGATCTGAGCCAGGAAAAAGTCAGAATTTTAGGTTCTCTAGCATCTTGCCCTGATCCTGATGTTGTTCGTGATACACTGGACTTCATGCTGTCACCTGAGGTGAGGAATCAGGACTCTATATTTTTGCTTAGAGGAGTCGGTGCAGCGGGACATGAGGTGGCATGGACATGGTTGAAGGAAAAGTGGGACTACATTTCAGACACCTTCTCTGGAACTCTTCTCACCTATTTCGTTTCCACCACCGTCTCACCGCTGCGCACCGATGAAATGGGCGACGACGCGGAGGAGTTCTTCAAGAGCAGGACGAAGGCCAACATCGCGAGGACGGTGAAGCAGAGCATCGAGAGAGTGAGGATCAATGCCAAATGGGTGGAGAGCACCAGGGCCGAGGCTAACCTGGGCAATGTCCTCAAGGAAATTTCTCACGACCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAEQSAEQFRGQARLPGFAAPRRYDLRLVPDLDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGAEQELHPAEVTNVPEDEILIIRFNEVLPVGEGTLVIAFKGTLNDKMHGFYRSVYELNGEKKNMAVTQFEPADARRCFPCWDEPSFKAIFKITIEVPSETVALSNMPVVEEKVNGLIKAVYFQETPIMSTYLVAVIVGMFDYVEAFTTDGTRVRVYTQVGKSAQGKFALEVAVKTLVLFKEYFAVPYPLPKMDMIAIPDFASGAMENYGLVTYRETALLFDEKHSAAANKQRVAVVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADNFFPEWNVWTQFLEESTTGFKLDALAGSHPIEVDVNHVDEIDEIFDAISYRKGAAVIRMLQSYLGAETFQKSLAAYIEKFAYSNAKTEDLWAALEEGSGEPVKTLMHSWTKQQGYPVVNVKLKDGKLEMEQTQFLSSGAEGVGQWVVPITLCCCSYSRQEKFLFNGKQEDFNLSGLVECQKKEDFWIKLNVNQTGFYRVSYDEELASRLRYAIEANKLSAADRYGVLDDTYALCMAGKQKLVSLLHLIAAYKDETEYTVLACVIDTSLSIVEMVAVAAPEGLGKLKKFLIDFLEPFAQRIGWDAKSGEGHLDALLRGTLLTALAELGHEATINEAVRRFNIFVEDRETPLLPPDVRKAAYVALMQTVNKSNRAGYESLLKIYKETDLSQEKVRILGSLASCPDPDVVRDTLDFMLSPEVRNQDSIFLLRGVGAAGHEVAWTWLKEKWDYISDTFSGTLLTYFVSTTVSPLRTDEMGDDAEEFFKSRTKANIARTVKQSIERVRINAKWVESTRAEANLGNVLKEISHDH</aaseq>

Gene Sequence

<dnaseqindica>1..237#820..965#1141..1243#1982..2168#2274..2367#2847..3000#3308..3412#3494..3610#3805..3918#4449..4631#4765..5044#5123..5244#5321..5418#5499..5676#5997..6111#6214..6281#6383..6460#6544..6618#6714..6896#ATGGCGGCGGCGGAGCAGAGCGCGGAGCAGTTCAGGGGCCAGGCGAGGCTCCCGGGGTTCGCGGCGCCCCGGCGGTACGACCTGCGGCTCGTCCCCGACCTCGACGGGTGCGCCTTCACGGGATCGGTGGACGTCTCCGTCGACGTCACGGCGCCCACCAGGTTCCTCGTGCTCAACGCCGCCGAGCTCGAGGTCTCCCCCGGGGGCGTCCAGTTCAAGCCCCATGGCGCCGAGCAGGTAGATATAGATTCGCTTTGGTTTCTCCCTGGCGCTTTGGGTGGTGGCCGGCCGTGGGTTCGATCTACTCGCGTGAGGGTGGGGGGTTTGGGCGTGACAGGTATATGTTGTTTTCGGTGGATTAAGGGTTTGATCTCTCGAGTCGAAAAATTAGGGGGAAGTTGACATTTACTTCAGTTATCGGAACTTGTTAGGGCTTATGTTTTTTTTTCTACTAAAAATGTCTTTGGATATTTCGATCTTTTTATAGCCTTTATTGTAGGCCTCATGATCTTGCATCCTAAGGGTTTTAGATTTAGATAGGGGGTCGTTGCCGCAGTTGAAAGTGTCAGGAAATCGGGATGTGATTTAATTATTTAGAATACTCATAATAAGTAGAAGGCCTGTGCTTGTAATAGTTAGCTTCAATTTAAGGTTTGTGTTTCCATATCTTTAATTTGGTAGGTTGAGGTTAGAGCCAAAATAATGATGGCTAGGAAGTAGCGATCTTTATTTTTTTGGGCCGAGGATGGTTTTGCAAATAATATCCTAGCATTTTGTTATGTATTTTCTTCATAAGGATCGTTCTATCTTTTGCATTAGGAGCTGCACCCAGCGGAGGTTACCAATGTGCCAGAGGATGAGATCCTGATTATCCGCTTCAATGAGGTTCTTCCTGTAGGGGAGGGAACTTTAGTAATTGCATTCAAGGGAACTCTGAACGACAAGATGCATGGCTTCTACAGAAGGTACTCATTTTGTGGTGAAAAGGTTTACTTGTAAATATTTTGTCTCATGTACATAAACTCTGTAAATATCTTTTATTAAATCTTAATATACTGTGGGGGCCTCTCCTCCCTGGTTTAAAAAAGTTTATTTGTAAATTAATAAATATATATATGTAATGTATTGTGTTGTCTCTAGTGTGTATGAACTCAATGGGGAGAAGAAGAACATGGCGGTAACCCAGTTTGAACCTGCTGACGCAAGGCGTTGTTTTCCTTGTTGGGATGAGCCCTCTTTTAAGGTCTACACTTCCTTGCCTTTTTTTTTGACTCCTGGTATCTCAAGCTAGTACTATATGTGTTATTTTTATTTCTGCTTCATGGGGAATAAGTGTTTTGGGCCATGCATGGTGCTTACGTTCAATCTCACTCAGTGTGATGTCTAGTTGAGGACAAAACAAATTATGTCCCTAAATGGACATATTGTGCCACGTGGGCTTCAGTTCTTCTTGTTATCGCTTCATGGAGTCCATGGAATTTTTTTTGGTGCTATCTCATTTGTTATCCCCAAGTTTGATGGTTAGGATTTAAATTCGTTAGGGTTAGTTATGTATTTTCACTTTTTTTTTTTACCTTCCATAGCTTTGGATGATATAAACTGAACAGTCACTCCACATGTTCGATTCATCCTTAAACTCTAGGGTATAGACTGATTACATGTTGCCTGATTTCATCTTTATATATGAGTTATGAGTAGACGAGTGTCTAGTGCCCATTGGATATAATGATATAGAGCAGGGCATGCATTGTTTGATTTTGTTGCTCATTTTCTGAACCTATGCCATATTTGTTTTCCTTCTGGAATCAAAATAGGTCTAGAATAACATCTGCAGCTCATCCTTTACCATACCAAAGAAAACTACATCCTGACTCTCTGCACCAACTGGTTAAAAGTGCATATGAAGAGGAGTTAAATATTAAGGGACTTTAGGTTAAACAGAAAATATAATGTGGGTTTAATCTCTCCTTCTTCGTTACAGGCTATATTCAAAATTACTATAGAAGTTCCGTCTGAGACCGTTGCATTGTCAAACATGCCAGTGGTTGAAGAGAAGGTCAATGGCCTTATCAAAGCTGTCTATTTTCAAGAAACACCAATAATGTCAACATACCTAGTGGCTGTTATTGTTGGCATGTTCGACTATGTGGAAGCTTTCACCACTGATGGTACTGTAACTCTTTCATTATCTCACTATCACACCTATTTTAGCTTTCACCTTTTTGTGGCTCATGTCTTGAATTTAATTGGCCTTGTCTTTATTTTACTTTCAGGCACTAGGGTTCGTGTTTACACTCAAGTTGGCAAGAGTGCCCAGGGAAAGTTTGCACTAGAGGTTGCTGTGAAGACACTGGTCCTCTTCAAGGAGTAATTATCTGTTCCTCTGCCTTAGTATTGATTATTTGATTAGCAGAGTTATCTTGTGCAGTTATGCTGCTATTACAGTGCTCATTAGACATTGATTATTTTTTATACCAGTAGTATTGCTGAGGAATTTCTGGAACTTGTCGTTGCCAAATAAATGCCATTGAATGATACTTATATAGTCTGCCTCTCTCTCTCTCTCTCTCTACATATGCAAATCTGCAAACTTTAACTTCTGCAGGTTGACAGATATATTTCATTCTATTGGAAAACCTTTTTTCTATATCTATTAGAGTCAAATCAAATATTACATTATGAGCTATTTCTGGATGTTATGAGTTTTAGAAGAGGCATTCAAATGATGTATCATTTCATAGTTATATAATTTGAGGAACTGTTAAGACTTGAGACATATGCATCAACCCTTAATTGACTTACTGTCATAAATGATCCAGCTGATGACAATTCCTTTATGTTGCTAGGTATTTTGCTGTGCCATACCCACTCCCAAAAATGGACATGATTGCCATTCCTGATTTTGCCTCTGGAGCAATGGAGAACTATGGCTTGGTTACATATCGTGAAACAGCTTTGTTATTTGATGAGAAACACTCTGCAGCTGCGAATAAGCAAAGGGTAGGACACTATTTTAATTTTATTATTTTGATTATTTATGCTAAGATTGCAATATGATTCATGGTCACCATTACACATGATTTATCCACCCAATTTGATTTATCAGCTAAACAAATGTTGATCTGATGGTGTGACCAGAAATTTTTCTTATCAGCAAATTAATAACTGGATAGTACACCGATGGGTCCTTTGAGTCATCATTTAAAGATTTAATAATTTCTGATATTCATATCTGTTTTGGTTGTCATGTTTAATTGATACCATCCTTCTGTAAGATACGTAGCTAATCTCTTATTCCACTGTTCAGGTTGCAGTTGTGGTAGCCCATGAATTAGCTCACCAGTGGTTTGGAAATCTTGTGACGATGGAGTGGTGGACACACCTATGGCTTAACGAGGGTTTTGCGACATGGGTAAGAACAAAACAATCAAGAGTACAAATATATAGAAAATTTACATTTTTATGTTGCTCATTTGATTTTTTCCTTTTGCAGGTCTCCTACTTAGCTGCAGACAATTTCTTTCCTGAATGGAATGTTTGGACCCAATTTCTTGAGGAATCTACAACAGGTTTCAAGTTAGATGCCCTTGCAGGGTCACATCCAATTGAGGTAATGTTTGATATATAGCTGCATATTTCTAATAATAGGTTTGTTTTCATCTAACTGTTTTTTCAGTTTCATTTAAGTTTTCTTAAAAAGCACTTAAAAAATTTTACTATACTTTTGATGCCAGTGTTACCAAGATCTTTCATTGCAAACTTACACTAAGACTTACATCGCAAATTTATGTATGCTATTTTCAGGTCGACGTAAATCACGTTGATGAAATAGATGAAATATTTGATGCTATAAGCTACAGGAAAGGAGCTGCTGTTATTCGGATGCTGCAAAGCTATCTTGGGGCTGAAACTTTTCAGGTTTGTGATGCATGTACTAGTGTGCTGCCCCATGTAGTGCTACAGTTTTCAAATAAATACGTACTGTAAATTCTAATTTTACAAAACACCAAACGACTATCTTCAAATCTAAAACTAAACTGGCCAAGTAGGCATGTACATACATACATGTGTACATGGTTTAATATTTAAAAAGATCTTACAAATGATACACTCTTTGATTATATAACCACAGGATTAGCATAAACTCACTATAACTACCGCTGGTCCTCTTTTAAATTCTAGACCAGAGATGTTCCCTTTGTTATTTTGGAAAATACAAATGGATGGCAGAATGGTCGCTTTTTATATTTGTTTTTTTAAAGACTGTTTATCAGCCTGCATAAGCTTTTTATTAGGACCTTAATATTTGCAGTAGTATGTTACCTGAGGAATTAACTAGGCGCAGAATTAGTTATTACTAATAATATTCTTTGGAACACAAGTTTGCATGAGGTTTCATTTTTTGCTTCTCATTGGAAATAAGAAGTTTGTATTGTTCTTTTTGCTAGAAATCTCTGGCCGCATACATCGAAAAGTTCGCATATTCAAATGCCAAGACTGAGGACTTGTGGGCTGCCCTTGAAGAGGGGTCTGGTGAACCAGTGAAAACATTAATGCATTCATGGACAAAGCAGCAAGGGTACCCTGTTGTTAATGTGAAGCTCAAGGATGGAAAGCTAGAGATGGAGCAGGTAAGACTTTCCTTTCTTTTTTCACTATAAGGTGGACTTCCTTCCCTCTATCTAACCCTTTTTGCATCCTAAAAAAATATTATTGTTTCTATTTGGAGGATTTGTGATTAGCACCTGGTCTTATCTCTTGCAGACACAGTTCCTATCAAGCGGGGCTGAAGGAGTTGGGCAATGGGTGGTTCCCATCACACTGTGTTGCTGTTCGTACTCACGTCAAGAGAAGTTCCTTTTTAATGGAAAGCAAGAGGATTTTAATTTGTCAGGGCTTGTAGAATGTCAAAAGAAAGAAGACTTCTGGATTAAACTTAATGTCAATCAGACTGGCTTCTATAGAGTGAGCTATGATGAGGAACTTGCATCTCGACTTAGATATGCAATTGAAGCCAACAAACTGAGTGCAGCAGACAGATATGGTAAAGTTCTTACAGAAGCATCTTATAAGTGGATGTTACCCTGCCCAACTGTTCTTACAATATTATTGTTTGGTACAGGTGTACTTGATGACACATATGCCCTCTGTATGGCTGGCAAACAGAAGCTAGTCTCCTTATTGCATTTGATTGCTGCGTACAAGGATGAAACCGAGTATACTGTGCTCGCCTGTGTCATAGATGTATAGATCTTTCTACCCGACAAATGTTTTTGTTAGATTGATTCTGTTCTAAGCATTTCAATTCTTGGCTTGATAGACAAGTCTGAGCATTGTCGAGATGGTGGCTGTTGCTGCTCCTGAGGGGTTGGGCAAGCTGAAAAAGTTCCTGATTGACTTTCTTGAGCCATTTGCACAGTAAGTTCTGTATGATGCCATTCCATAGTGGAAGAATATTTTGTCCTACAACCTCCTAAACATTCAGGAATCCTTTGCAGGAGAATTGGTTGGGATGCTAAAAGCGGTGAGGGTCACTTGGATGCATTATTGAGAGGTACACTTTTAACTGCTCTGGCAGAACTTGGCCATGAAGCTACAATAAATGAAGCTGTACGCCGATTTAACATCTTTGTGGAAGATAGAGAAACACCACTACTCCCTCCAGATGTTCGAAAGGTTAGCATTGTAATTTACTGCACATTATGTTGGGGTTATTTGTTAATTTTATATCTCATTAACAGGAATAGTGTTATTTGTTAATTTTATATCTCATTAATGAAGTTGAGTTTGTTCATGAAACTTTGTAGGGTTGTTTATTTACATATTACCTACATGTGTGATTCTTTTTGAGATTTTTTGAAAATTTTATAAAAAAGTTTCCAAGTTTCTGCCTAAGATGTGGTTTCCACCATGTATTTTTCCCATTTGTATAGCTATGTAACTATGCGAACTATCTGCACTCAGATCTTCTTTTTAACCATCTTCCTGTTTTGTAGGCGGCATATGTTGCTTTGATGCAGACAGTGAACAAATCAAACAGAGCCGGCTATGAATCACTATTGAAGATCTATAAAGAAACTGATCTGAGCCAGGAAAAAGTCAGAATTTTAGGTTAGTCAAATATGCATTTAATATTTATTTTGACATAGGTGACATTGTCTGTCTGAAGTTGGGACTTGGGACCTTTTATAAGTTCTGTTCCTCCTTATGTAGGTTCTCTAGCATCTTGCCCTGATCCTGATGTTGTTCGTGATACACTGGACTTCATGCTGTCACCTGAGGTAAATACAGGAATCAGTAAACACCTTCACATTCTACATGATACAGCCAAAACTTTATCTCATGTGATAAGCATAACTCACAACATTTTATGAATGAACAGGTGAGGAATCAGGACTCTATATTTTTGCTTAGAGGAGTCGGTGCAGCGGGACATGAGGTGGCATGGACATGGTTGAAGGTGCTTACAAATATGTTATTTTCCTCGATTCGCCTTTCTACTTCCTGTTTCTTCTACTGACACCATGCTTCTTTATGGTTCAGGAAAAGTGGGACTACATTTCAGACACCTTCTCTGGAACTCTTCTCACCTATTTCGTTTCCACCACCGTCTCACCGGTACACAGTACACCTTATTTTCAACGTGCTCACATACACATGCCATTATCGTTACATTGTAAATTTTCCTGACTCCGTGTCGAAAATTGTTCCAGCTGCGCACCGATGAAATGGGCGACGACGCGGAGGAGTTCTTCAAGAGCAGGACGAAGGCCAACATCGCGAGGACGGTGAAGCAGAGCATCGAGAGAGTGAGGATCAATGCCAAATGGGTGGAGAGCACCAGGGCCGAGGCTAACCTGGGCAATGTCCTCAAGGAAATTTCTCACGACCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007797