BGIOSGA007806

From RiceWiki
Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007806| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007806, complete gene.| tag = OsI_064...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007806

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007806, complete gene.

LocusTag

OsI_06407

Ensembl Transcript ID

BGIOSGA007806-TA

Ensembl Protein ID

BGIOSGA007806-PA

Length

4772

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7720839..7725610

Sequence Coding Region

7720839..7721919,7722033..7722143,7722506..7722808,7724425..7724846,7724978..7725610

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7720839..7725610 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7720839..7725610 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACAACAAGAGCACAACATGGTCACAAAAGGCACTGAAAGACTGGTTGCTGGCGCACAACTATTTGGCCATTCTACAAGGCAACCATTCTACATGATTCAACCTTCGGAAGAAGTTGTTCAGAAGGAGAAATTCTATCATCACTGCCTACTGATCACATCTGATGTCAGTAACCTAGACCTAAGAAAAGTGAAAGTTGAAGTAAGCAAGTTTTGGAAGCTGACTGACTGGGAGATAAGGACAGAAGGCAGACATAATTTCCTAGTGTCCTTGAACTCAGAGGATGACCTAGTAAGCTGTTTAAAGACTCCAAGAATAGAAACATCAATAGATGATAAGGAGGTGAACTTTACTGTAGCAAGATGGAAGGAAGATGATGATGAAAACATTGAATTGATTAGAGAATGGATTTTAGTTTATGGGGTCCCAAGGATATACAGAAACTGGAAGGAGCTATATCAAATTGCATCAGCAGTCGGGGTATTGATTGATGTGGATGAGGAAAGTTTGGAAGGTGACCATAAGGAGCCTATTAAGTTAAAGGTTGCATTGAGAGGTGTCGATGCTGCTCCTTTCTCATGTCACTTTGTGTTCGGGTGGTATTCAAGATGTGTTACATTCACAATAGAAGACAAAGCACAAACCACAGAGTGTGAAAGGGAGGTCTTGGAAGATTGCAATGGTGAAGATCATCTTGATGAATTTGGTAAGGAATACAACAACAAGACAGACAAACTTATTGAAATGCCTCCAGAAATACTGAATAAAGGGATGAATTTGGAGAGCAGTAGTCATGACACTAGTATTGTTGTTTCAACTCACAACCATACATTGGATGTCAAAGGCTGCTCAGACAAGGAATTAGAGGCAATAGAATCAGCTGTATTAGTGGAAGAGCCTAGCTCCATTGAGGATAACAACATAAGTGCTCCAGCACCCACTACAACCATCATCTCTGAAAAGACAGCAGAAGACAGTCCCTGGGCTGAAAGGGAGCAGTCCATAAGTGGAAGTTCAACTAGCATGATTGGAGACACGCTCTTCAAAGGCGAGTCAAAGTTTACACAAATCATGCATGCAGCCACTGTGATCCACTCCAAGAAAACAACTGAAGACATACCAAAAGCTGAAGGGGGGCAATCCACAAGTGGAAATTCAACAAGCATAATTGGAGAAGAACCCTTCAGAGGTATACAAAAACCACCTGTCAAGATTGTGTATGCAAGAAGAAATAAAAGATCCATGGAGAAGCAGGATTACAAAAGCTTCCTAGAAAAACAACATCAGAAGGAAATGGAAGCAGCTATAGTGGGCCAAAGGCAGAAGTCGGATGATGAGTCTGGAGGAGATGGAAACAATAAAGACAGCAATTCGATTGCTCCATCTGCCATTGCGATCAACTCTAAGAAGAAGCAAACAACAAAAGACATTGTGACAACTCAAGGAGCACAATCTATCAGTGAGAGTTCAATTGGAGAAACTCAGACAAAAGATCTGGATAAGCCTTCTGCAGTCCATCAAAGAGGAATTGTCCCACTATGCAATGGTCTGGACATTATCCAGCAGTCACTGTTTGGAACAACTGTGACCTTGTGCTGTGGTATTCTGCAACGACTAGATTATGCATCTACAGAATGCCAGGCTTTGGTTCTTGTACCAACACGTGACTTAGCACATGAGACTAAAAATGTTATTGGAGTACTTGGTCAATTCCTAAGTGCTAAAGCTCATGCTTTTTGTGGAGGGACTAGTGCCCATGAGGACCAGCAAATTCTGTCTACTGGAGTTCAGGTTGCTGTTGGCACCCCTTATCACGTTCTTGGCATGCTGCAAGGTAGAGCACTCTGTCCAGATCACATTAGAATGTTTGTCTTGGATGAAGCGGATGAAGTACTGAGAGGTTTCAAGGACCAGATCCATGGTATTATCCAGTTTCTTCCAACCAAAACCCAGTTTGGGTTCTTCTCTGCTAGTATGTCCCATGAAGCTCTTGAGATGTGCCGCAAGTACATGAATAAGCCTGTGGAAATCATTGTGCCAAGAGATGAAGAACTTGAGGGTATCAACGTCAAGCAGTTCTATGTTAACGTTGAGAAGGAAGAATGTAAGCTGGACAAATTGTGTGGTCTTTTCAACACCATGGAAATCACATGGAGCATCATTTTTGTCAACACTCGGCATCAGGCCAAGTCATTGACAGAAAAGATTAGAGGCAAGGGGTACACTGTCTCAGCAATTCATGGAGGCATACACCAAAGAGCCAGAGACAAAGCTGTTCAGGAGTTCCAGTCTGGATCATCCCGTATCCTCATCACCACTGATCTCCGTGGCATCGATGTTCTGCGTGCCCCTGCTGCCATCTTCTACGATCTGCCGACGCAACCAGTCTGCTACCTCCGTCATGTTCAAAGATGTGGGCAGCATGGACGGAAGGGTGTGGCCATCAGCTTCATAACTAGCACTGATGAGCGTGTGTTCTCTACCATCCAGAAGTTCTGCAACACCCAAATAGAGGAGCTACCCTCCAACGTTGCAGATCTCCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAQQEHNMVTKGTERLVAGAQLFGHSTRQPFYMIQPSEEVVQKEKFYHHCLLITSDVSNLDLRKVKVEVSKFWKLTDWEIRTEGRHNFLVSLNSEDDLVSCLKTPRIETSIDDKEVNFTVARWKEDDDENIELIREWILVYGVPRIYRNWKELYQIASAVGVLIDVDEESLEGDHKEPIKLKVALRGVDAAPFSCHFVFGWYSRCVTFTIEDKAQTTECEREVLEDCNGEDHLDEFGKEYNNKTDKLIEMPPEILNKGMNLESSSHDTSIVVSTHNHTLDVKGCSDKELEAIESAVLVEEPSSIEDNNISAPAPTTTIISEKTAEDSPWAEREQSISGSSTSMIGDTLFKGESKFTQIMHAATVIHSKKTTEDIPKAEGGQSTSGNSTSIIGEEPFRGIQKPPVKIVYARRNKRSMEKQDYKSFLEKQHQKEMEAAIVGQRQKSDDESGGDGNNKDSNSIAPSAIAINSKKKQTTKDIVTTQGAQSISESSIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGTTVTLCCGILQRLDYASTECQALVLVPTRDLAHETKNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPYHVLGMLQGRALCPDHIRMFVLDEADEVLRGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYMNKPVEIIVPRDEELEGINVKQFYVNVEKEECKLDKLCGLFNTMEITWSIIFVNTRHQAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDLRGIDVLRAPAAIFYDLPTQPVCYLRHVQRCGQHGRKGVAISFITSTDERVFSTIQKFCNTQIEELPSNVADLL</aaseq>

Gene Sequence

<dnaseqindica>1..1081#1195..1305#1668..1970#3587..4008#4140..4772#ATGGCACAACAAGAGCACAACATGGTCACAAAAGGCACTGAAAGACTGGTTGCTGGCGCACAACTATTTGGCCATTCTACAAGGCAACCATTCTACATGATTCAACCTTCGGAAGAAGTTGTTCAGAAGGAGAAATTCTATCATCACTGCCTACTGATCACATCTGATGTCAGTAACCTAGACCTAAGAAAAGTGAAAGTTGAAGTAAGCAAGTTTTGGAAGCTGACTGACTGGGAGATAAGGACAGAAGGCAGACATAATTTCCTAGTGTCCTTGAACTCAGAGGATGACCTAGTAAGCTGTTTAAAGACTCCAAGAATAGAAACATCAATAGATGATAAGGAGGTGAACTTTACTGTAGCAAGATGGAAGGAAGATGATGATGAAAACATTGAATTGATTAGAGAATGGATTTTAGTTTATGGGGTCCCAAGGATATACAGAAACTGGAAGGAGCTATATCAAATTGCATCAGCAGTCGGGGTATTGATTGATGTGGATGAGGAAAGTTTGGAAGGTGACCATAAGGAGCCTATTAAGTTAAAGGTTGCATTGAGAGGTGTCGATGCTGCTCCTTTCTCATGTCACTTTGTGTTCGGGTGGTATTCAAGATGTGTTACATTCACAATAGAAGACAAAGCACAAACCACAGAGTGTGAAAGGGAGGTCTTGGAAGATTGCAATGGTGAAGATCATCTTGATGAATTTGGTAAGGAATACAACAACAAGACAGACAAACTTATTGAAATGCCTCCAGAAATACTGAATAAAGGGATGAATTTGGAGAGCAGTAGTCATGACACTAGTATTGTTGTTTCAACTCACAACCATACATTGGATGTCAAAGGCTGCTCAGACAAGGAATTAGAGGCAATAGAATCAGCTGTATTAGTGGAAGAGCCTAGCTCCATTGAGGATAACAACATAAGTGCTCCAGCACCCACTACAACCATCATCTCTGAAAAGACAGCAGAAGACAGTCCCTGGGCTGAAAGGGAGCAGTCCATAAGTGGAAGTTCAACTAGCATGATTGGAGACACGCTCTTCAAAGGCGAGTCAAAGTTTACACAAATCATGCATGGTATATTAAATATGTTTGAGATAATAGGATAATCCATTTCTAGTTTCTCCAAGAAAACATTAATAGGCCTCATTTTTTTTATAGTTGACATCATCTTCTTTATGCTTCACCAGCAGCCACTGTGATCCACTCCAAGAAAACAACTGAAGACATACCAAAAGCTGAAGGGGGGCAATCCACAAGTGGAAATTCAACAAGCATAATTGGAGAAGAACCCTTCAGAGGTCAGTGAGAATTCTGTATTCGTAAAGTTTGTATTTTTTCTCTCAAATACAGAGAGATTTGAGCATCATTATATTAGGAAGAAGAAAGAGGGGGTAGAACCCCGAGTACAAAACCAAACACGCACACACTGAGATCTGCATAAAGTTTCTTTTGTTATAAGGATTTTCTTTATAAGGATAATACTTCTAAGTAAAAAGGAAAAACTAACTGATTCTCGATTCTTTGAAAAATGTAGTTTTAGCATGTATGTAGGTGAATGTGTCAGCTACACTAATTTTAGCACATATGTAGGTGAATGTGTCAGCTACACTAGGATAAGTTTTTGTTGATTGGCATTATGTTCATAACAATTCCCTTGAAGGTATACAAAAACCACCTGTCAAGATTGTGTATGCAAGAAGAAATAAAAGATCCATGGAGAAGCAGGATTACAAAAGCTTCCTAGAAAAACAACATCAGAAGGAAATGGAAGCAGCTATAGTGGGCCAAAGGCAGAAGTCGGATGATGAGTCTGGAGGAGATGGAAACAATAAAGACAGCAATTCGATTGCTCCATCTGCCATTGCGATCAACTCTAAGAAGAAGCAAACAACAAAAGACATTGTGACAACTCAAGGAGCACAATCTATCAGTGAGAGTTCAATTGGAGAAACTCAGACAAAAGGTGAGCGAGTATCCTGTTTATGCAAAGTTTACTGTCGCGTATTCCTTATACCTGTCCTAAACAAATTGCTCTATTAGAACTTAAAAGGAAAATGCAGAAACAACATTTTATTAGAAATTTCTGATAGAACAGGGTAAACCATATCGAATTATAAAGTGTAGGATTAGAAGTATCTTGTTATTACTTAGTTGTGTTGAACTGTCCCTGATCGTGTTGGCATGGCTGGAACAGGAACCGGAGGAGCTCGGTTTAATGCAAATCAACACGTTTCTAAAATGAGCAAACAGTATGTGATCTAACATTTTCCTTTTTATATTATTGGATTTTGTATTTATATTTTGAGTAAACTGCACTCACGATACACAAACTTACGTGGTGGGTGTAAATAGATACAATAACTTGTAAATTATGCATTTTAGTATAACAACTTGTCTAGTCCGTGCGAACCAGGCCAAAACAATCCATGCATTCAAAATAATTTGATGTGGCGTTGACACGGATGCCATGTCGCTTTCCTTCTTGGCTCGTTTCAGTTCATGTTTGCATCTTTTTGCACAAAAGTTACAAAATCGTAAGCATGGAAATTTTGTTTCGTGCATTCTATTACACTCACCCATCCCTGAAATAGTTCAATGCAACATGGACCTAAATCGCTGACTAGCTACAAGTGCTCAGAGATATTGGTGGAGGGTCGATTGGCCATTACACTACCGTTTTAATACGTGGCAATTAGTATGAGCTATTGCTAACAATTTGTATGAGATGAAGCTGGCAGCTACACTTCTGTCGTTGATCAGTCTGATCACCAGCCACTCTAGTTGTTTCAGTCTTAGAAACTACTACTCCACGGGGTATTACAGGATATGTGCTTCTTCCACTACTGCAACCTCCATCTTCTTGCCATTACAACGGCGTGCAACTAATTGTCTCCTCAACCGCATAGTTCCGGTGCCACATATGTTATTTTCAAATACATAGACTATTTTGGCCTTAATTTATATGGACTACACAAGTAGTTGTATCAAAATACACATTTTGCAAGTTGTTGTATCTATTTGCACCCACCATACAAGTTAGTGTACCATGAATACAATTTACTCTTATATTTTTTCATCATATATGAATATTCAATTATGTCCAACATGGGAATGGCATGATATGGACTAACTCGAAATTCCAGGGAACACAATGAAATCTTTAAGAGTTTCAATGAGATGGGTCTCCAAGAAAGCCTACTGAAGGGAATATATGCATATGGTAATTCTTATTTATCTGCTTTGTGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAGTTCTATGTTAACGTTGAGAAGGAAGACTATAAGCTGGACAAAGGGTGTGGTCTTTTCGACACCAGGGAAATCACACGGAGCATCATTTGTGTCAACACTCGGCATCAGGCCAAGTCATTGACAGAAAAGATTAGAGGCAAGGGATACACTGTCTCAGCAATTCATGGAGGCACACACACATTCTAGGCAGCAATTTTTATTTGGCAGAGCTTTTACAAGAAACCCCCATTGTTCTTATCCCTTGATGTTATGTTTACAGATCTGGATAAGCCTTCTGCAGTCCATCAAAGAGGAATTGTCCCACTATGCAATGGTCTGGACATTATCCAGCAGTCACTGTTTGGAACAACTGTGACCTTGTGCTGTGGTATTCTGCAACGACTAGATTATGCATCTACAGAATGCCAGGCTTTGGTTCTTGTACCAACACGTGACTTAGCACATGAGACTAAAAATGTTATTGGAGTACTTGGTCAATTCCTAAGTGCTAAAGCTCATGCTTTTTGTGGAGGGACTAGTGCCCATGAGGACCAGCAAATTCTGTCTACTGGAGTTCAGGTTGCTGTTGGCACCCCTTATCACGTTCTTGGCATGCTGCAAGGTAGAGCACTCTGTCCAGATCACATTAGAATGTTTGTCTTGGATGAAGCGGATGAAGTACTGAGAGGTTTCAAGGACCAGGTTAGTTCTACACTCATTTGTAGCAATAACAAAGAATTACTGCACTGGGCAACCTAGTTACAAAGCATGCCCTATTTGGGACTCCATTTCCACATGTAATTCTTACTAATGGTCATCTATCATCTTTGCAGATCCATGGTATTATCCAGTTTCTTCCAACCAAAACCCAGTTTGGGTTCTTCTCTGCTAGTATGTCCCATGAAGCTCTTGAGATGTGCCGCAAGTACATGAATAAGCCTGTGGAAATCATTGTGCCAAGAGATGAAGAACTTGAGGGTATCAACGTCAAGCAGTTCTATGTTAACGTTGAGAAGGAAGAATGTAAGCTGGACAAATTGTGTGGTCTTTTCAACACCATGGAAATCACATGGAGCATCATTTTTGTCAACACTCGGCATCAGGCCAAGTCATTGACAGAAAAGATTAGAGGCAAGGGGTACACTGTCTCAGCAATTCATGGAGGCATACACCAAAGAGCCAGAGACAAAGCTGTTCAGGAGTTCCAGTCTGGATCATCCCGTATCCTCATCACCACTGATCTCCGTGGCATCGATGTTCTGCGTGCCCCTGCTGCCATCTTCTACGATCTGCCGACGCAACCAGTCTGCTACCTCCGTCATGTTCAAAGATGTGGGCAGCATGGACGGAAGGGTGTGGCCATCAGCTTCATAACTAGCACTGATGAGCGTGTGTTCTCTACCATCCAGAAGTTCTGCAACACCCAAATAGAGGAGCTACCCTCCAACGTTGCAGATCTCCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007806