BGIOSGA007811

From RiceWiki
Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007811| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007811, complete gene.| tag = OsI_064...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007811

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007811, complete gene.

LocusTag

OsI_06414

Ensembl Transcript ID

BGIOSGA007811-TA

Ensembl Protein ID

BGIOSGA007811-PA

Length

3060

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7779161..7782220

Sequence Coding Region

7779161..7779379,7780136..7781771,7781850..7782220

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7779161..7782220 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7779161..7782220 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAACAAACGGTATGTGAACTTCTTCCTGTTCTTTGTGATATCATTTTCTCTGCTGCACAAATCCTACCCAAAGTCCACAAATCAATCTAATGAAGAACACCAAATCCTCCTTGAGCTCAAGAACCATTGGGGGAGCTCACCTGCGCTAGGTAGATGGAACTCCACTACTGCTGCTCACTGCAACTGGGAAGGAATTACATGCACAAATGGTGCGCTGAGTGGATCAATACCACCAAGCGTTGGGCTGCTGCCAAAGCTTACTGACATTCGGTTATTCGGTAACATGCTCTCTGGATCACTCCCACCAGAGCTTGGTAAGCACTCACCACTGGCCAATCTTGAGGTCTCCAATAATAACCTCTCTGGGAAGCTACCAGAAGGCCTCTGCTTCAACAGGAAGCTATATGACATTGTTGTGTTCAATAACAGCTTTTCTGGAAAACTTCCATCGTCATTGGACGGCTGCTATCTGTTGAACAATTTGATGATGTACAACAACAATTTTTCTGGAGAGTTCCCCAAGAGTCTTTGGTCAGTGGTGACAAATCAGCTAAGTACAGTTATGATACAAAACAACAGGTTCTCTGGCACATTCCCCAAACAGCTCCCATGGAACTTTACACGTCTTGACATCAGCAACAACAAATTCTCAGGTCCTATTCCAACATTGGCAGGAAAAATGAAAGTATTCATAGCAGCAAACAACTTGCTGTCTGGTGAAATTCCCTGGGATCTGACAGGCATTTCTCAGGTCACAGAAGTTGACCTCTCTAGGAATCAAATTAGTGGCTCACTACCCATGACAATTGGAGTGCTGGCGAGGCTAAACACACTTAACCTAAGTGGAAACCAGATATCTGGTAATATCCCAGCGGCATTTGGGTTTATGACAGTACTAACCATCCTTGATCTCTCGTCGAATAAATTATCAGGTGAAATCCCAAAGGATTTTAATAAGCTGAGGCTCAATTTTCTGAATCTCTCTATGAACCAACTCATCGGGGAAATTCCGATATCACTGCAAAACGAAGCATATGAACAAAGCTTTCTATTCAACCCAGGCCTCTGTGTATCATCAAACAATTCAGTTCATAATTTCCCTATCTGCAGGGCAAGAACAAACGGCAATGATCTATTTAGGAGGCTTATAGCCCTCTTTTCTGCTGTTGCCAGCATCATGCTTTTGGGTTCAGCAGTGCTTGGTATCATGCTCTTAAGGAGAAAAAAGCTTCAAGACCACTTGTCATGGAAGCTAACACCATTCCACATATTGCATTTCACCACAACTGACGTTCTTTCTGGGCTCTACGAGCAGAATTGGATTGGAAGTGGCAGGTCTGGCAAGGTGTACCGGGTTTATGCTGGGGATAGAGCAAGTGGTGGAAGGATGGTGGCCGTCAAAAAGATATGGAACACACCGAATCTTGATGACAAACTGGAGAAGGACTTCCTTGCAGAGGCTCAGATATTGGGAGAGATCAGGCACACAAACATTGTCAAGCTGCTCTGCTGCATCTCAAGTTCAGATGCAAAGCTTCTTGTCTATGAGTACATGGAAAACGGCAGCCTACATCAATGGCTTCACCAGAGGGAAAGAATTGGTGCGCCGGGACCTCTGGATTGGCCAACAAGATTGCAAATTGCCATCGACTCAGCGAGAGGTCTTTGCTACATGCATCACCATTGCTCGCCTCCCATAGTGCATCGAGATGTCAAGTGTGCCAACATCCTTCTGGATCACAACTTCAGAGCAAAGATGGCAGATTTTGGGCTTGCAAAGATTCTTCTCAAAGCTGGAGACGACGAGTCATTTTCTGCTATAGCTGGAACTTTTGGCTACATGGCACCAGAATACGGACATCGGCTCAAGGTAAACGAGAAGATCGATGTCTACAGCTTTGGTGTGGTCCTTCTGGAAATCATAACTGGTCGAGTGGCAAATGATGGTGGAGAGTACTATTGCTTGGCACAATGGGCATGGAGGCAGTACCAAGAATATGGTTTGTCAGTTGATCTTCTTGATGAGGGGATCAGAGACCTAACCCACGTCGAAGATGCGTTGGCAGTGTTCACACTTGCTGTGATTTGTACTGGAGAGCAGCCTTCAGTGCGACCATCAATGAAAGATGTGCTGCATGTGCTTCTCCGATTTGACCGTAAATCCAATGGAGGAATCTTGCAAGATGATATCTGTGACGAAACAGCTCTTCTTGAATCATAG</cdnaseq>

Protein Sequence

<aaseq>MANKRYVNFFLFFVISFSLLHKSYPKSTNQSNEEHQILLELKNHWGSSPALGRWNSTTAAHCNWEGITCTNGALSGSIPPSVGLLPKLTDIRLFGNMLSGSLPPELGKHSPLANLEVSNNNLSGKLPEGLCFNRKLYDIVVFNNSFSGKLPSSLDGCYLLNNLMMYNNNFSGEFPKSLWSVVTNQLSTVMIQNNRFSGTFPKQLPWNFTRLDISNNKFSGPIPTLAGKMKVFIAANNLLSGEIPWDLTGISQVTEVDLSRNQISGSLPMTIGVLARLNTLNLSGNQISGNIPAAFGFMTVLTILDLSSNKLSGEIPKDFNKLRLNFLNLSMNQLIGEIPISLQNEAYEQSFLFNPGLCVSSNNSVHNFPICRARTNGNDLFRRLIALFSAVASIMLLGSAVLGIMLLRRKKLQDHLSWKLTPFHILHFTTTDVLSGLYEQNWIGSGRSGKVYRVYAGDRASGGRMVAVKKIWNTPNLDDKLEKDFLAEAQILGEIRHTNIVKLLCCISSSDAKLLVYEYMENGSLHQWLHQRERIGAPGPLDWPTRLQIAIDSARGLCYMHHHCSPPIVHRDVKCANILLDHNFRAKMADFGLAKILLKAGDDESFSAIAGTFGYMAPEYGHRLKVNEKIDVYSFGVVLLEIITGRVANDGGEYYCLAQWAWRQYQEYGLSVDLLDEGIRDLTHVEDALAVFTLAVICTGEQPSVRPSMKDVLHVLLRFDRKSNGGILQDDICDETALLES</aaseq>

Gene Sequence

<dnaseqindica>1..219#976..2611#2690..3060#ATGGCCAACAAACGGTATGTGAACTTCTTCCTGTTCTTTGTGATATCATTTTCTCTGCTGCACAAATCCTACCCAAAGTCCACAAATCAATCTAATGAAGAACACCAAATCCTCCTTGAGCTCAAGAACCATTGGGGGAGCTCACCTGCGCTAGGTAGATGGAACTCCACTACTGCTGCTCACTGCAACTGGGAAGGAATTACATGCACAAATGGTGCGGTGATTGGCATCTCTCTACCAAATCAAACCTTCATCAAACCAATTCCTCCCTCCATTTGTCTCCTAAAGAACCTCACCCGCTTGGACCTTTCCTACAACAATTTCTCCACTTCATTCCCTACCATGCTCTACAATTGCTCCAATCTCAAGTTCCTAGATCTTTCCAACAACGCATTTGCTGGACAACTCCCAAGTGACTTAAATCATCTATCAGCACTGCTCGAGCATCTCAACCTATCATCTAATCACTTCACAGGCAGAATTCCACCATCAATTGGACTGTTCCCAAGGCTGAAGTCACTGCTCCTTGACACCAATCAGTTTGATGGGAGGTACCCAGCTGAGGATATCAGCAATCTTGCTGACCTTGAGAGGCTGACACTAGCAGTCAATCCATTTGTACCGGCTCCCTTTCCAGTGGAGTTTGGTAGGTTGACACGTCTGACTTACTTGTGGCTGTCAAATATGAATATTACCGGTGAAATCCCTGAAAACTTGTCCAGCCTCAGAGAGCTCAACCTCTTGGATTTTTCATCAAACAAGCTGCAAGGAAAAATTCCAACGTGGATCTGGCAACATAAGAAACTTCAGATTTTGTACCTGTATGCAAACGGATTCACCGGTGAGATTGAACCCAATGTCAGTGCCTTGAACTTGGTGGAGATTGATGTTTCTTCAAACGAATTAATAGGAACCATACCAAATGGATTTGGTAAGCTTACCAACCTTACCTTACTGTTTCTCTACTTTAACAAGCTGAGTGGATCAATACCACCAAGCGTTGGGCTGCTGCCAAAGCTTACTGACATTCGGTTATTCGGTAACATGCTCTCTGGATCACTCCCACCAGAGCTTGGTAAGCACTCACCACTGGCCAATCTTGAGGTCTCCAATAATAACCTCTCTGGGAAGCTACCAGAAGGCCTCTGCTTCAACAGGAAGCTATATGACATTGTTGTGTTCAATAACAGCTTTTCTGGAAAACTTCCATCGTCATTGGACGGCTGCTATCTGTTGAACAATTTGATGATGTACAACAACAATTTTTCTGGAGAGTTCCCCAAGAGTCTTTGGTCAGTGGTGACAAATCAGCTAAGTACAGTTATGATACAAAACAACAGGTTCTCTGGCACATTCCCCAAACAGCTCCCATGGAACTTTACACGTCTTGACATCAGCAACAACAAATTCTCAGGTCCTATTCCAACATTGGCAGGAAAAATGAAAGTATTCATAGCAGCAAACAACTTGCTGTCTGGTGAAATTCCCTGGGATCTGACAGGCATTTCTCAGGTCACAGAAGTTGACCTCTCTAGGAATCAAATTAGTGGCTCACTACCCATGACAATTGGAGTGCTGGCGAGGCTAAACACACTTAACCTAAGTGGAAACCAGATATCTGGTAATATCCCAGCGGCATTTGGGTTTATGACAGTACTAACCATCCTTGATCTCTCGTCGAATAAATTATCAGGTGAAATCCCAAAGGATTTTAATAAGCTGAGGCTCAATTTTCTGAATCTCTCTATGAACCAACTCATCGGGGAAATTCCGATATCACTGCAAAACGAAGCATATGAACAAAGCTTTCTATTCAACCCAGGCCTCTGTGTATCATCAAACAATTCAGTTCATAATTTCCCTATCTGCAGGGCAAGAACAAACGGCAATGATCTATTTAGGAGGCTTATAGCCCTCTTTTCTGCTGTTGCCAGCATCATGCTTTTGGGTTCAGCAGTGCTTGGTATCATGCTCTTAAGGAGAAAAAAGCTTCAAGACCACTTGTCATGGAAGCTAACACCATTCCACATATTGCATTTCACCACAACTGACGTTCTTTCTGGGCTCTACGAGCAGAATTGGATTGGAAGTGGCAGGTCTGGCAAGGTGTACCGGGTTTATGCTGGGGATAGAGCAAGTGGTGGAAGGATGGTGGCCGTCAAAAAGATATGGAACACACCGAATCTTGATGACAAACTGGAGAAGGACTTCCTTGCAGAGGCTCAGATATTGGGAGAGATCAGGCACACAAACATTGTCAAGCTGCTCTGCTGCATCTCAAGTTCAGATGCAAAGCTTCTTGTCTATGAGTACATGGAAAACGGCAGCCTACATCAATGGCTTCACCAGAGGGAAAGAATTGGTGCGCCGGGACCTCTGGATTGGCCAACAAGATTGCAAATTGCCATCGACTCAGCGAGAGGTCTTTGCTACATGCATCACCATTGCTCGCCTCCCATAGTGCATCGAGATGTCAAGTGTGCCAACATCCTTCTGGATCACAACTTCAGAGCAAAGATGGCAGATTTTGGGCTTGCAAAGATTCTTCTCAAAGCTGGAGACGACGAGTCATTTTCTGCTATAGCTGGAACTTTTGGCTACATGGCACCAGGTCAGAGAGAAAAAGAGTAACTTTGATGAGTATATACTTGCATATTACCTGAAACACTAAATTGTTTACACTTTGCAGAATACGGACATCGGCTCAAGGTAAACGAGAAGATCGATGTCTACAGCTTTGGTGTGGTCCTTCTGGAAATCATAACTGGTCGAGTGGCAAATGATGGTGGAGAGTACTATTGCTTGGCACAATGGGCATGGAGGCAGTACCAAGAATATGGTTTGTCAGTTGATCTTCTTGATGAGGGGATCAGAGACCTAACCCACGTCGAAGATGCGTTGGCAGTGTTCACACTTGCTGTGATTTGTACTGGAGAGCAGCCTTCAGTGCGACCATCAATGAAAGATGTGCTGCATGTGCTTCTCCGATTTGACCGTAAATCCAATGGAGGAATCTTGCAAGATGATATCTGTGACGAAACAGCTCTTCTTGAATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007811