BGIOSGA007816

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Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007816, complete gene.| tag = P0470A0...")
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Gene Name

BGIOSGA007816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007816, complete gene.

LocusTag

P0470A03.19

Ensembl Transcript ID

BGIOSGA007816-TA

Ensembl Protein ID

BGIOSGA007816-PA

Length

7466

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7891993..7899458

Sequence Coding Region

7891993..7892163,7892459..7892513,7895343..7895452,7895555..7895740,7895852..7895947
,7896079..7896150,7896384..7896500,7898289..7899458

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7891993..7899458 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7891993..7899458 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGACTTTCTTTTCTTCCAGCCGGGAGTTCAGAGAGCGAGCCATCGGAAGAGTCTGTCATGGATTTAATTTTGATCACCGCACTCACGGGATTCATTTGCAGAAGTTCAAGGTCTTTTTGTCATCCAGTCTGTGGCTGCAAGCCTGAGGCTCAGATGGGAAGTGAGGAATGGGTTATGGCAGTTTGTAGAACTATTTGGTTACCGCAACAATTTATCGAAGGGCACGGATCTGCTATCCCATCTTTATCTTCTCATGGCAGCACACCTCAGTACTCCTCATATGGTGGATACCAGGGTACAAGCAAAACAATTGAAATCCCAAATGGAAGGGTTGGTGTTATCATTGGAAAGTCGGGAGAAACTATAAAGAATCTCCAACTTCAGTCAGGAGCTAAGATCCAAGTGACAAGAGACCTTGATGCTCTACCTGGCTCACAGACAAGACCTGTTGAACTTTCAGGCACTCCTGATCAGATAAGCAGAGCTGAGCAATTGATCAATGAGGTCCTGGCAGAGGCTGATGCTGCTTCATCTGGTAATCTCTCTAGCCGAAAGTACAATGCTCCTCAACCAGGCGCTGATCAATTCCAAATGAAAATAGCTAACAATAAGGTTGGTCTGGTTATTGGAAAGGGTGGTGAGACTATAAAATCCATGCAAGCCAAATCTGGTGCTCGTATACAGGTTGTCCCTTTGCATTTACCCCCTGGTGATCCTGCAACCGAAAGAACAGTGTATATTGATGGTACACAAGAGCAAATTGAAACTGCAAAGCAATTGGTGATTGAGGTTACCAGTGAGAATCGTGCTAGAAACCCAATGTCAGGTGGCTATTCTCAGCAGGGCTATCGCCCTCCTCGTCCTCAGTCAAATTGGGGTCCGCATGGGGGGGCACCGATGCAACAGCCTGGTTATGGTTACATGCAGCCTGGAGCCTATCCTGGGGCACCCCCACAATATGGCGCTCCTCAGCAACCTTATGGTAGCTACCCTCCAGCATCTGGGGGTTATCAGACTGGGTGGGATCAATCATCAAATCAGCAATCTCAGCAGGCCCCCCCTGGCACGGGCTATGATTATTACAATCAACAGCAGCAACCTCAACAGCAACAATCTGCCCCTGGGACTGCTGCACCTGGTGATGCTACTAGCTATAATTCCAGCCAGCCTCCTGCATATGCTTCCCAAGGCTATGATTCGTCCTACGCTCAGCAGAGTGGTGGGCAGCAGCAGGCATATGATTATTCTAGTTATTATCAGACCCAAGGGCAGCAGCAGGGCTACTCTCAGCAGACTGGATATGATCAGCAGGGCTATGGAACTTCTGGCTATGGGTCCGCCGCTAATTCAACTCAGGATGGGTCCGCACCAAGCTATGGTGCTCAAGGTGTAGCTGGTCAAGCATCTCCTGGGCAGCAAACTTCAACTCCTGCTGCTGGAAGCCACCCTGGCTATTCAAGCCAACCACCTACTAGCGCTGCTTCAAGCTACCCGGTGCAAGGGTCTGCTCCTCAGTCTGGATATGGGGCGCCACCACCACAGACTGGCTATGGTACCCAGCCCCAACCACAGGGAGGGTATAGTCAGGGCAGCTATGGCGCACCTCCGCAGGGACAGAAGGCTCCTCCTAACACTTCTCCTTACGGACAGGCGCCGCCTCCTGGATCTGCTCCTGGTGGGTATGGCCAGTATGGTTACTCTCAGAACCAGCAAGGCTATGGCGCACCTCCACCTTACCCTGGTGCACCTGCTGCAAGCCACCCAGGCTATGGTCAGCAGCAGTCCTATGGTGATCCTTATGGCAGTGGAAGCTACGGGCAGCCTGCCGCATATTCTACTGAAGCTACAACTGCTGCTGCCTCCCAGGACCAATCTGCTTCCGCCCCTGCGACTGGTGCTGCGCCTGCGACAACCGCTGCTCCGGCACCTACTGCTCCTGAGAACAGTGGAGCCCAAAGCCCTGCTAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MARLSFLPAGSSESEPSEESVMDLILITALTGFICRSSRSFCHPVCGCKPEAQMGSEEWVMAVCRTIWLPQQFIEGHGSAIPSLSSHGSTPQYSSYGGYQGTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIETAKQLVIEVTSENRARNPMSGGYSQQGYRPPRPQSNWGPHGGAPMQQPGYGYMQPGAYPGAPPQYGAPQQPYGSYPPASGGYQTGWDQSSNQQSQQAPPGTGYDYYNQQQQPQQQQSAPGTAAPGDATSYNSSQPPAYASQGYDSSYAQQSGGQQQAYDYSSYYQTQGQQQGYSQQTGYDQQGYGTSGYGSAANSTQDGSAPSYGAQGVAGQASPGQQTSTPAAGSHPGYSSQPPTSAASSYPVQGSAPQSGYGAPPPQTGYGTQPQPQGGYSQGSYGAPPQGQKAPPNTSPYGQAPPPGSAPGGYGQYGYSQNQQGYGAPPPYPGAPAASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGAAPATTAAPAPTAPENSGAQSPAS</aaseq>

Gene Sequence

<dnaseqindica>1..171#467..521#3351..3460#3563..3748#3860..3955#4087..4158#4392..4508#6297..7466#ATGGCCAGACTTTCTTTTCTTCCAGCCGGGAGTTCAGAGAGCGAGCCATCGGAAGAGTCTGTCATGGATTTAATTTTGATCACCGCACTCACGGGATTCATTTGCAGAAGTTCAAGGTCTTTTTGTCATCCAGTCTGTGGCTGCAAGCCTGAGGCTCAGATGGGAAGTGAGGTTAGTTGTTCAACAAAAAATATTGTGCCGTCTTCTGTTGCCCAACTCATGGTCTGTAGCTAGCTCCTAATGCTGTGCTATGTAATATGACCACTCTACGTTTCTTATGCTGATCTATATTACTTTTATTTTTCTATAGGGAAATCACTTTTATATCCTCTATATCAAAGCTGTAGGCAAGAAGAAATCATTCTTATTGAGATTGAATTGTATTTCTCTCTTCATTCCATCAATGGCTATTTGGAGAACTATTTCGATACTGCAAAAATTTTCTTTCTATATATGTGCTACACAGGAATGGGTTATGGCAGTTTGTAGAACTATTTGGTTACCGCAACAATTTATCGAAGGTATGATTCATGTGTCTCAAACTCCTCTTCCTTAATTATACAAAGTCAGCTATTCTAAGAAAATAAAATATCATGAGAATATTTGGTTTTTTATCTCAATGTCCGCCCATTCAAAAGGTTCATGGTCCTCAATGTCGGCCCATTCAAAAAGTCTTAGAGAGCATGACTCTTTAGTTCGATTGGTCAGTCTTAAAACAAAGAAATTAGTTTTGTATGATAGCAATCAAGTTCCTTTGATAATCAATTTTAATATTTTACTAATATGTTTACCACAATCGGTTTACAAATTTTAATATTATTCACAAGATTTCCTGCTGCAACGCGCGGGGTCTCATCTAGTTCTTAGGAAAAGTATGCACTCATGATTAGGCTTTTCTAGATCATATTTATGTGGACTTCCAAATAAAGTGATATATAAAAGGTACACACTTAGTGAACATGATTTTAAAAGCATCGTCAAGGTGTTGTCGTGAGGCAAAGTGTTCAGGACACATATCCTTCCACACGGTTAGGCGACCCATATTTCTTCAAATAGAGGAATAGGGCCACATGGTGGTCTATATCACGCGCTTGGGATGAAAATCATGCTGAATTCTGAGGGCGAGGCTATGGGTCAAGGTTGCGTGAGGAGAAAATTGCTGTTACGTGAGGGGCACAATTAGAAGATGAGATAAGGAAACAACTGAAGGTGCAATTGGAGGAGGAAATAAGAAAACAATAGAAGAAATCAATTGGAGGAAGAGGTAAGGAAACAATAGAAGATAAGCACCTAGAGGCTAGACCTTAGTGACGATGGCAACATTCGTCTTGGTCTTACCCCCTCTTCTTCGATGTATCCACACTTCCTTCTTGGGTAGGGCACAAATAAATTTATTTGTGCCCTCCATCTCCCTGCCAGCACCCTTCCTTCTAAGAGTCATCCTGCAGGCTCTCTGTTTGTTGTGCTCTTTCGCTCATTTGCTCTTCTTCATATGTTCTGCTATGCTTTTTACGCTCTCTACTGCTTAGGGAAGAGAGAATGGTAGATAGATATGATGAAGAATTGGTAGCAAGCTTGGGAAATGAAAGAATGGGAGGCACAAGGTATTTAAAATTGGCAGCAACAAGGTATGTTTATACAATAAAATTTAGGAATATATGTAGGTTAGGAATAGGTTACACGTCGCCTCGAATCACACCTTGAACGTGAAGCTTGCCCTTGTCGCATTGAATAAAGTTTTGTTTCTAAAACCTACAAATGGTTGTTGCTGTAGTTTGGAGACTAGTTTTCTATACTGAAGTAAGATTGAATTTTAAGTTCGTGGGAAATAGGAGCGATCATAACCAAAGTGCATACGTTTAAGCGTAATTCGATCATGTACACTCACTTTATTTCGGATAACTTGAAATTGAAGGTCTATTCCTATATTAGTGAGTCGACTCTACATATCAGCACGTTATAGTAAACCCTCAATTTTCAATCTAAATGAGGTTGCATGATCAAATTTCTCCGCTTTATAAGCATAATTGATATGTATATGGATATACAATTTTGTTTAGATAACTACATTGGATTTAGACTTGTCCTAGAAAAAGTGTTGAGCGATTTGGGGTTTCGATTGATGCATCATTATTCATTAGTTGAAACATGGTCCTCTTTTAAGGAAATGATAGCAAACACATTTTTCAGCTAAATAATGGGTGCAAAATTACAAAGTTCAGAAAACAGAAACAAAATCATCTTCGAAATTAAAAATAAGGGAAAGATTGTAATCACCCATCTACATTACATTCAACCATGTATTATGTTGTTTTGTACTACAACTTATACAGTTCACACCAGTTCTAGTTCTACCTGACGACTGATCTTACATACATGTATATAGGGCCTGCTTGGTTGGTGCCCTGAGTATCATGCCTGAGGAATTTGCGTGCCTGAGAGGCATAGGAGAAGTTGATGAAACTTGCCTGGCCTGGCGGCCTGACATTCTGCTTGTTTGGTTGTGGATAGTTGCCTGAGAGGAAAAAAATCTTTACGTTTTAGATGGGTACTGCTAACCATAACAAACCAATTTATTGCCCAGCTTTTGATGTATTAATCATTTGCGTACGTCAAGATGGAAAAAAGAACGAAGAACACAAGAAAAACAAAATCCCAAATCCACGCGTCTGGCAGAACACCAACCTAATGATTTTTGCCGGCTTCACGTACATAAAGAAGGGGAAAAAATAGAACAAAACTGCTGCTATCTGTGGGAGATCAGATGGGTCGCAAATGGAACTGACGAATCGAGATATTTCACCGTAGATTTGTGTGACGCCAGCCGGATCTAGCAAGATGGTGGTGGCTTCCCACGGCGGAGGCAATACTACATGCGCGTGACGACGGCGGAGGAAAATTATACGTCAGTAATCCTCGCTAGCTGCTGCGCCTGGAGCTCAGGTGACTGAAATAGGTCGCTTGACTCAGGCTAATCACGCGCGGAGATGCATCAGGCCAGCAACCAAACAAGGCCAAAACCGTGTAAGGCTCGTCTCAGGCCAGGCTAGTTCTCCTCAGGTAGCAACCAAACAGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCATGATTGTCACCATTATACTCTGCCTCCTTTTTCGTAAAAATGGTATATGGGATATTCAACTGTACCACATTCACTTTACCATGGTATCGATTACCTTTTTATGATTGTATTATTTCCTTCTATTGAAGTACCCCTATGTCTATTGTTTCATTTAAATTGTTTGTTTACTTCACTTTTATTATGGATTTACCCATCTACGTGCTGCCTGTTATATCAGGGCACGGATCTGCTATCCCATCTTTATCTTCTCATGGCAGCACACCTCAGTACTCCTCATATGGTGGATACCAGGGTACAAGCAAAACAATTGAAATCCCAAATGGAAGGGTAGGCTTTCTTAGATTTACCTGTTCCAATGACTAACTTTTTTGTGATGGAATGAATTTCACATCAACTGGTCTTGCTAACAAGTCTGGTGGCCTAATGCAGGTTGGTGTTATCATTGGAAAGTCGGGAGAAACTATAAAGAATCTCCAACTTCAGTCAGGAGCTAAGATCCAAGTGACAAGAGACCTTGATGCTCTACCTGGCTCACAGACAAGACCTGTTGAACTTTCAGGCACTCCTGATCAGATAAGCAGAGCTGAGCAATTGATCAATGAGGTCCTGGCAGAGGTAATCCTGTTACTCTCGTGGCTTTCCTTTTACCATTTTAGGGATGACTTGACATTAGCTGAACATCTTGTTCGATGGCCATACTTATTATTCATGTAACCTCTTCTGCAGGCTGATGCTGCTTCATCTGGTAATCTCTCTAGCCGAAAGTACAATGCTCCTCAACCAGGCGCTGATCAATTCCAAATGAAAATAGCTAACAATAAGGTAATCCACTTTTCTGAATTAAAGTTAGCTTGATGCTATTGAAAAAAAATCACAGTTCTGCTAAAAATACAATGAGGATGAGGGTCTCGGTGACAATTCCACATCTGACGTAATAATTTTGTTTATTTCAGGTTGGTCTGGTTATTGGAAAGGGTGGTGAGACTATAAAATCCATGCAAGCCAAATCTGGTGCTCGTATACAGGTCTGTGTTCTTGCCCTGCAAATTCACGCTTTAGGCAAGGGCGTTCATGACATGGCACTATTGTTTTTGTTATAATACTTTTTTTTCTGCATTGTAATTTTGTTGGCTAAGACTACCGAAATGACACACATGCTTGCCTGTTTGCATATGAAATATCTGAAGCATGCTTACTATATGAACTGGTTGCTTCCAGCATTTCTATACCTTTTATGTTCTCATGTGCACATTTGCAGGTTGTCCCTTTGCATTTACCCCCTGGTGATCCTGCAACCGAAAGAACAGTGTATATTGATGGTACACAAGAGCAAATTGAAACTGCAAAGCAATTGGTGATTGAGGTTACCAGTGAGGTCCGCTTTTATCCCTTGTCATATTTGTTGCCTGATTTCATGATTGCTATGCCAATTTGCGACTTATCTGTGGTGTTAAAACAATTCTGCCTTCTTATTTTTTTTGGTTAATTTTGGATCCTTATGTTTTATCCTTCCCCCCTAATTGGCCTTCCTTTCTTTACTTGTTCTTTTTAAAAGAAACATTTGCCTTACTTTTGCTTCTGTGATGGCCTATGGTTCTCTGACAATAATGTTCATGACATCTTTATGTACACATATTAGTCATGGACTCAGGGTATGCCGTCAACATGCTCCCACACATGAGGGTGCCATACTATCTTTCTAATACACACACAGTTTCCAATATCCGATGCACAAACTGATTTATAATTTTTTTTGTCTTCATAGCTGCTCTATTGATTCTCATTATTTTAAATGTGTACAGTTAAAATAATCTTCTAACTATTGATGCAAAAATCTCCATTATACCCTAATAGTACTCTTGGATCAATGTTCTGATTTGTTAGCTACATATTGTGTGTGCTTGGTGCTGCCTATTCAACTCTGAACTATATTCTTATATTGATTCTCTCAATTAATGTATATATTTCCCATCTCCAACTATATTTTTATATTGATTCTCTCAACATAATACTGTCCATACCTTGGTATGTGGCACACACATCTACACTGGAGACCAGGTTTGTTATGGCATAAATTTTCATATTCGGGATCCTGCTTGATAGAAGATTAATTTTTAACTAATAGTTTGGATATCTGTTTGTGATCTAACCTCATATACCTGGTCTCGTATAACTTTTAAGTTGGGCTGGTCCCTTATCTCTTTTGTGGATAGTTTGTATACATTGCTTTACTCAAGTGAAATACATGGGTGGTGTACATATGTTTGCAGGTTGTGCAATTTAGGTGCAGGTATTTAGGCTACAGTTTTGTTTTGCTGTTTTAGTACTCTATATATATCACTTCTGGCGCCTTTGCCTTGCGCACTATTTGATGCTTAATTCTCGGTATGGATGGGCGCTGGTCACTACATGTCAACTCACTCTAGTTCAATCAAATGAACTAGTGGGCCGATTGGTACTCACATAGTGACCCGTGTCCATCCCTAATTCGCAGCCCATGATATTTGCTCTCTTCAAGTTGGGAGTAGCATGTAATTCGAACTTGATGTTACTCTAATAATAACCCTGAAAATCTATATAGTTCAAACTTAGATTCATGTAACAAGGGCACGTTGGATTCCTTATTTGTTTATTTCTCGTCTATATTTTCTCCTCTGTGAACTTGCAGGTTACCATACCTAAGCTGTTAGAAAACTGCAAAATATTTCTCCTTTGTTTATACCATATTCTTGGAGGAGACCATGGACAAAAGAAATTATTGGTGCTTATCTGTTTTGATTATCAATGAAATAGATATTTTACTTAGTTGAGTAGTATAATCACTTATCAGTCAATTATTTTTGACCTGTCAACATATATAAACTGCATGGCACTCTTCTATTGCTATTCAATATATATGTTCGTCTAGATGTCCAATCTTCTTTAGCCCCCATAGTTTTGCACATGGGAGACGATAGATGGGCATCAGCAATGTTGCTTGAGAATATTGATCTCGGTGAGTTTTGCTCCCTCTATTTTTCTTGGTGGTTCTGGAATTTCTGTATGTTACTTTGCTTTGGATTTGTATATGTTTGTCTGTCTTTTGCACTGCTGTTCTGCATGGTTTGTCGTATATTATTTTGTTGTATATACATATACAGATGGGCAAACTATATTTTTGCAGAATCGTGCTAGAAACCCAATGTCAGGTGGCTATTCTCAGCAGGGCTATCGCCCTCCTCGTCCTCAGTCAAATTGGGGTCCGCATGGGGGGGCACCGATGCAACAGCCTGGTTATGGTTACATGCAGCCTGGAGCCTATCCTGGGGCACCCCCACAATATGGCGCTCCTCAGCAACCTTATGGTAGCTACCCTCCAGCATCTGGGGGTTATCAGACTGGGTGGGATCAATCATCAAATCAGCAATCTCAGCAGGCCCCCCCTGGCACGGGCTATGATTATTACAATCAACAGCAGCAACCTCAACAGCAACAATCTGCCCCTGGGACTGCTGCACCTGGTGATGCTACTAGCTATAATTCCAGCCAGCCTCCTGCATATGCTTCCCAAGGCTATGATTCGTCCTACGCTCAGCAGAGTGGTGGGCAGCAGCAGGCATATGATTATTCTAGTTATTATCAGACCCAAGGGCAGCAGCAGGGCTACTCTCAGCAGACTGGATATGATCAGCAGGGCTATGGAACTTCTGGCTATGGGTCCGCCGCTAATTCAACTCAGGATGGGTCCGCACCAAGCTATGGTGCTCAAGGTGTAGCTGGTCAAGCATCTCCTGGGCAGCAAACTTCAACTCCTGCTGCTGGAAGCCACCCTGGCTATTCAAGCCAACCACCTACTAGCGCTGCTTCAAGCTACCCGGTGCAAGGGTCTGCTCCTCAGTCTGGATATGGGGCGCCACCACCACAGACTGGCTATGGTACCCAGCCCCAACCACAGGGAGGGTATAGTCAGGGCAGCTATGGCGCACCTCCGCAGGGACAGAAGGCTCCTCCTAACACTTCTCCTTACGGACAGGCGCCGCCTCCTGGATCTGCTCCTGGTGGGTATGGCCAGTATGGTTACTCTCAGAACCAGCAAGGCTATGGCGCACCTCCACCTTACCCTGGTGCACCTGCTGCAAGCCACCCAGGCTATGGTCAGCAGCAGTCCTATGGTGATCCTTATGGCAGTGGAAGCTACGGGCAGCCTGCCGCATATTCTACTGAAGCTACAACTGCTGCTGCCTCCCAGGACCAATCTGCTTCCGCCCCTGCGACTGGTGCTGCGCCTGCGACAACCGCTGCTCCGGCACCTACTGCTCCTGAGAACAGTGGAGCCCAAAGCCCTGCTAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007816