BGIOSGA007817

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Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007817| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007817, complete gene.| tag = P0470A0...")
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Gene Name

BGIOSGA007817

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007817, complete gene.

LocusTag

P0470A03.20

Ensembl Transcript ID

BGIOSGA007817-TA

Ensembl Protein ID

BGIOSGA007817-PA

Length

7959

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7900068..7908026

Sequence Coding Region

7900068..7900229,7900334..7900383,7900522..7900582,7901160..7901255,7901340..7901489
,7901794..7901925,7902227..7902354,7902871..7902913,7903521..7903604
,7904506..7904547,7904721..7904791,7905078..7905131,7905246..7905351
,7905495..7905563,7906281..7906424,7907495..7907570,7907752..7907800
,7907981..7908026

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7900068..7908026 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7900068..7908026 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGCGGCGCCCCCCTCCTCCTCGTCGCTCGCGCCCCCCGAGGTGCCCATGGAGCTGCACGCCGGCAACCGCGATCGCCTCGTCGCCGCGCTCCGCGCCCACCTCTCCGCCTCCGGCCGCCCCCTCCGCGGCCTCGTCCTCCTCCAGGGAGGGGAGGAGCAGACGCGGTACTGCACCGATCACCTCGAGCTCTTCAGGCAGGAGAGCTACTTTGCTTATCTCTTCGGAGTGAGGGAACCGGGGTTCTATGGCGCAATCGACATTGTCTCTGGACAGTCAATTTTGTTCTCTCCAAGGTTGCCAGCTGATTATGCTGTGTGGATGGGTGAAATTAAGCCATTGTCTTATTTTAAGGATAGGTACAAGGTCGACATGGTGTTCTATGTTGATGAGATCACACAAGTTCTGCAGGACCGTTTCAGCGATCATGGAAAGCCTCTTCTGTTTGTGTTATATGGAAAAAATACAGACAGCGGAAATTATTCAAAGCCTGCTAGTTTTGAGGGGATGGAGAAGTTCGATTCCGATCTAAGTACACTTCACCCTATTTTAACTGAATGCCGTGTTATCAAATCTGACATGGAGCTTGCCCTTATTCAGTATGCTAATGATGTGAGCTCTGAAGCTCACATTGAGGTCATGAGACGAGCAAAACCAGGCATGAAGGAATACCAGTTAGAAAGCATCTTTCTTCATCATGTTTATATGTATGGGGGCTGTCGACATTGCTCTTATACATGTATATGCGCTACTGGAGAAAATAGTTCTGTTCTTCATTATGGACATGCTGCAGCACCAAATGACAGGACCCTGAATGATGGAGACATGGCACTAATGGACATGGGAGGTGAATACCATTGCTATGGATCCGATATAACATGCTCATACCCTATAAATGGGAAATTCAACAGCAATCAGACAATAGTATACAATGCTGTCCTTAAGGCTCATAATGCTGTCATAGCACACATGCGGCCTGGAGTAAATTGGTTGGATATGCACAAACTTGCGGAGCAGACTATACTTGAATCTCTCAAGAACGAAAGAATTCTCCATGGGGATGTCACTGATATGATGGCTCAAAGGTTGGGTGCTGTTTTCATGCCTCATGGTCTTGGACACTTGCTTGGTATTGACACCCATGATCCTGGGGGCTATCCTGAGGGCTTAGAGAGGCCAAAGGAGCCAGGACTGAGCTCCTTGCGGACCATAAGAGAACTTAAAGAAGGCATGGTTATCACAGTTGAGCCAGGTTGCTATTTCATTGATGCTTTGCTGATACCAGCCAGGGATGATCCAGTTTCCTCGAAGTTCTTCAACTGGGAAGAGATTGAAAAATACAAAAGCTTTGGTGGTGTTCGGATTGAGAGTGACGTGTATGTGACGGCGCATGGATGCAAGAACCTGACAAACTGCCCCAGGGAGACCTGGGAAATCGAAGCTGTAATGGCTGGATCTGTTGAAGACGGTCCCCTCGAGTATCGTCCTTTGAAAACTGAAAGGACTAATGTGGTATCATTAAAATGTCTTGCTTCATTCTACATCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAPPSSSSLAPPEVPMELHAGNRDRLVAALRAHLSASGRPLRGLVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIVSGQSILFSPRLPADYAVWMGEIKPLSYFKDRYKVDMVFYVDEITQVLQDRFSDHGKPLLFVLYGKNTDSGNYSKPASFEGMEKFDSDLSTLHPILTECRVIKSDMELALIQYANDVSSEAHIEVMRRAKPGMKEYQLESIFLHHVYMYGGCRHCSYTCICATGENSSVLHYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFNSNQTIVYNAVLKAHNAVIAHMRPGVNWLDMHKLAEQTILESLKNERILHGDVTDMMAQRLGAVFMPHGLGHLLGIDTHDPGGYPEGLERPKEPGLSSLRTIRELKEGMVITVEPGCYFIDALLIPARDDPVSSKFFNWEEIEKYKSFGGVRIESDVYVTAHGCKNLTNCPRETWEIEAVMAGSVEDGPLEYRPLKTERTNVVSLKCLASFYI</aaseq>

Gene Sequence

<dnaseqindica>1..162#267..316#455..515#1093..1188#1273..1422#1727..1858#2160..2287#2804..2846#3454..3537#4439..4480#4654..4724#5011..5064#5179..5284#5428..5496#6214..6357#7428..7503#7685..7733#7914..7959#ATGGCGGCGGCGGCGGCGGCGGCGCCCCCCTCCTCCTCGTCGCTCGCGCCCCCCGAGGTGCCCATGGAGCTGCACGCCGGCAACCGCGATCGCCTCGTCGCCGCGCTCCGCGCCCACCTCTCCGCCTCCGGCCGCCCCCTCCGCGGCCTCGTCCTCCTCCAGGTCCAGCTCCCGTTTCGCCTCTTTTGTTGTTGTATTCCCCTTTTTTCCCGGAGGGTTTCCTGAAGGGCTTTTTCCGGCGATGTTGAACCCTTCGTCTTCTCCAGGGAGGGGAGGAGCAGACGCGGTACTGCACCGATCACCTCGAGCTCTTCAGGTAGTTAGCTGCTGCCCTGAACTCACTCAAGTCCGTGTTGTTACTGCATTATTGTATTTCTGTTTCATGGGACAATCAGATTGGGAGGTTGAGTGGAGATCGAGTGGAAAACCTGGATTGATTTTTTTTTTTTAACAGGCAGGAGAGCTACTTTGCTTATCTCTTCGGAGTGAGGGAACCGGGGTTCTATGGCGCAATCGTGAGTTTCTCTTGTTCCTCTTGCTGTTGCTCGGTGGACTAACCTTTCATTATTTTCCTGCGACTATTTGGTCCTGATATATTTGTTCATGAATTATGAATATATACATGCTTGGAAGATGGCATTGTCCCTGTGGTTATTGGCATGGTGTGTGTAGGTGAATTTTTCGGGACTTGTTCTTGCGTAGAAATGGTAGAGCTCCTCAATATATAGGTGAAATGTTTCTATGAATGTATATGTACTCACCTCGCTGTTAGTGTAATTTAATTTGGTGCTCATGGGGTTAACTCACTGTTCCATCCTGCTTAGTGGTTTGTTCACTTTCTGCATATTAGTTAGAACCACGGGAAAATGTTAGGATAGATTGGTGGTTGGTTCAAATCATTTCACTTATCTTCCTACACAATCATGCTTATAAGGCAAAGATCCGTGACAATTATTGCGAATCGTTTTGTTTCTAAGAGCTTTTTGACAGTGTGGCAACAAGCCCCTGCTACTGCAGGTTATTCTGCATAGTTATATGATACTGGTTATTTGATATGACGTGTCCTAACTGAGTCTTTTGTTGTTCTGAAAGGACATTGTCTCTGGACAGTCAATTTTGTTCTCTCCAAGGTTGCCAGCTGATTATGCTGTGTGGATGGGTGAAATTAAGCCATTGTCTTATTTTAAGGTATTTGATCTTCTAGATACCACATTTTGCATTTTCTGCTAAAGTTTGAAGTTTGAACTAGCATCTTTGCATGAATCTATACAGGATAGGTACAAGGTCGACATGGTGTTCTATGTTGATGAGATCACACAAGTTCTGCAGGACCGTTTCAGCGATCATGGAAAGCCTCTTCTGTTTGTGTTATATGGAAAAAATACAGACAGCGGAAATTATTCAAAGCCTGCTAGTTTTGAGGTACTTAAAATATTAATGTATGCATCGTTAACATTAATTTTGTATTTGTAAAATACTGTAGATTGAAAGCATAATCAGGCATGTTGCTCTTGCAATACTGTTTTCTTTATTGTCTTCAATTTAGTCTCAAACAAGATCCATTTCCTTCTTATGATCTTCGACTTATTCTCCAAGAAGATCAAGATCCATTTGTGTATTATGATATATGTAATCTATCAAGGCACTCAGTTTCTCTCACACTTCTCTGCTCACATTGTGCATTCAGGTTACAATGTTAATTTTTTTTTCTTCCTGTTTTTGCCAGGGGATGGAGAAGTTCGATTCCGATCTAAGTACACTTCACCCTATTTTAACTGAATGCCGTGTTATCAAATCTGACATGGAGCTTGCCCTTATTCAGTATGCTAATGATGTGAGCTCTGAAGCTCACATTGAGGTAACTACGGATACCGCTTAATGTAGTTTATTTTTTCTTTTCCTTTTCTTTAAAAGGGATCATATAGAAGCAGACAAATACTTGTAAGGTTACAAGAATGAGAAAAATATGATATGCATCAGTCAGTCCTACCACACCAGGTCCTAACGCATCAAGCAAAGTGCAATGCTAATAAAGTTATAATACTGGGACCCACTATCTGATTCAATTCATAAGAACATATGTTTGGCATTTAGGTAATTATAATTACTTATTGAGATGCAAATTATATTGCTGCACTTATTTACTTGCACTTCACAAGGTCATGAGACGAGCAAAACCAGGCATGAAGGAATACCAGTTAGAAAGCATCTTTCTTCATCATGTTTATATGTATGGGGGCTGTCGACATTGCTCTTATACATGTATATGCGCTACTGGAGAAAATAGGTGAGTGCTCCTGTTGCGAAGCAAATGCCTATATATGGACTGATTGGTATCTTTAAACGGTTTTTCACCCACTTTTGAGTATAGTTCAATATGTATAAGCCGAATAGTAAAGGAAGGATGATAGAATCCTAGATCCATTATCCACTGTTATTTTGCATGCTATTTCCTTTCAAAGTTGGGACAGTAATGTATAAAGTATTCTGATACCATGATCTTCTAGTGGAAGAGGTAGCAATTTTTGCAATAGAGTAACCTTAGTTCTATAAATAAGAGTACTCATTTCAACATTGATGTGTCAGTAGGGTCTCTCTTTTACCAGCATTCAGATCGAAGCTGGTAACTACCTATTTTTGGACTTATTTCGATACAAATGACTATGTAGACGTATATCAGGTCCAAATGTGACATTCTGAATGTGTTCTAAGTTCACTACTCTGTCCTAAGTCTGCATCTCAGATATTCATAGTTGAGTTGGTTGAACTATCTGGTGTTTTAACTCTTCTGCCTGTTGTGCAGTTCTGTTCTTCATTATGGACATGCTGCAGCACCAAATGACAGGGTACTCTTTTACGAAACTATGCGACTGTTGTTAATGTTTGTGTGCTATTTATTTACTTGTTATACCCACCACCAAGCAAAGCTTAACTTGTCCAAAGTGGCAAAGCGCTCAAACCTCTTATGATCATGCTGCCAGCTAATTGAAAATGGGGATGATTTGTTTTAATTTCAAGACAGTAGAGTTCACCTACCTTGTTCATCATCAGCTACAGTTTATTAAGTACCAATGTACCATGGGGTCTTGTAGTATTGGAAGAAAGAGCAACTTTCTCTTCTCTAGCTGATGTCACTATTCGTAGCAAACTTGGAGGTTATCTAATGGAAGCAGCCAATAGAACGAGTTGTTCTGGTGCTTTATTTAGTCGATAACTAGGTGGTATATCAGTGTATGAGTGTCTGCTATGCCACCTCTTTATACCGAGTTAGCTATAAATTGAATGTTCATTCTCTTCAATGAAGTATGTGAATGTGAATATGTGGTGGTGTAGTTGTCCTACGGGGACTATGAAACGCTAGACCATGCAGTCAATGATTTAAGCTACTATGCAGGTCCACATTACTAGCTAGCAGGAAAAAAACTGCAACTTAAATTATCCTTTTTTTTCCAGACCCTGAATGATGGAGACATGGCACTAATGGACATGGGAGGTGAATACCATTGCTATGGATCCGATATAACATGCTCATACCCTGTAAGTGTTTTGGAATATCCAGACATCTACTTTGATAGATATTTTGTTCCAACTTGCAATGTATTAGAACTGCTTTTTTGTTATTTATTGTTGAAATCTGTGACAACAGTGTACCTGTGCTAGAAACATGTACCAATAGATGTAAGCTATAATTATATTTGATGCTAACATATGGATGATATTGTTCTTACAAAATGTCCGGCAATTGAAAGAGGTCCTTTTTCTTAGTCCTATATATAGTCTCTTGTGTTATATAGCAAATTTGATTTCTTACTTTTTATTTTTAAGAATAATTTTAGGTATTTTTTTTACTTGTCTTAGTAATCATGAAAAGAGAGCTCAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCGCGCGCGCTTGCTTTTCCTGGGAGTCTTTTGTCTCCACCTTGTTTAGTCATCCTTATTAGTTTTTATCATCACATGCCATGGGTATCTGTTGGATGTATGTGTCCAGTTCAATAGTATCTAGCTGCCCTGAGCTTTTTTCCCCATCCAATATTATCTAGTTTCATCGTGGTGCTATTCCCATATTCTCTCAATTCAATTCTGATGCATATTTGTCTTATGATTCCTTTTGATATATATACTTTAGCTGACTTTGGGCAATTGGCTTATAGCTGACTTGAATAAAGTCTAGAATCTAGATTGATGCATAGCCTTATAACTCTAGAATCTAGATTGATGCATTACTTTTTAGCATAACTTTGATCAAAACCACACAATTGTCTCTTTGTCTTGTTCTGTCTATTGATATGATCTAAGTGAGTCTATATATTTCAGATAAATGGGAAATTCAACAGCAATCAGACAATAGTATACAATGTGAGTACTGATAAAAATCATTTTCTTTCTTCCTGATATATTTCTTGCCTGGCTGTTCTTTTTTATCTTTTGCAGGCTTCGTTAGGCTACTATCCTCATATAAAGAGTTCTTCATGTGAATTGAACTTATATGCATAGCACCATCTTTATATGAGATTATCTGTGTTTTACAGGCTGTCCTTAAGGCTCATAATGCTGTCATAGCACACATGCGGCCTGGAGTAAATTGGTTGGATATGCACAAGTAAGAATGCACTATTGCAATTTAAAAACCATGCATTTTAAACACGTCCTTTATGAAGTTCTGTTAATGAGTGAGTTCAATTATGATGCAACTTTCAATGCATGGAACTTTATTCAATCCATCTAATCCAGGAATATTTGCAATGCAACTTCAATGCATGGAACTTTATTCTATCCATCTAATCTAGGAATATTTGCAGTTGAATTATGCAATTTATCATGTTGATTTATGCAAAATTGAATTGTTTTCCCCTGTTTGTTCAAGCATAATTTGATGGTATTTGCAGACTTGCGGAGCAGACTATACTTGAATCTCTCAAGAACGAAAGAATTCTCCATGGGTGTGTATGCTTGCATTCATTGTACTGAATTACTGGTTGAACATCAGCCTGCAAAGCTTATGCCTGTGATGTTGATTTTTGCTGGTGTTTTATCCTTGGTCATCATTTGTTCAGGGATGTCACTGATATGATGGCTCAAAGGTTGGGTGCTGTTTTCATGCCTCATGGTCTTGGACACTTGCTTGGTATTGACACCCATGATCCTGGGGGCTATCCTGAGGTTATTTTAATACATACTTTATGCCATGAATTATCTTTGAGCATAGCTTTATAGTTCTAAATTGCTCCCTTCTTTTAACTGAGATGAATGTCCTTTTTTCTTGGCTTTTAACTGAGATGGACGTCTTTTTTCATTGATTTCAGGGCTTAGAGAGGCCAAAGGAGCCAGGACTGAGCTCCTTGCGGACCATAAGAGAACTTAAAGAAGGCATGGTTAGTACCTGCTTTTCTGATTAATTTCTGAAGATTTAGCATAAAAAAATCTTCTATTTTTTTCTGTTAACTGTGTGTGCTTTGTCGCGAATGCGACATTAATCAATTTAGTTCCTTGACTGTTTAAGACTACATTTTCTTTTTAGGCATTCTGGTAACGTTTTACCTTTTTCAGATTTTGAGAATTCCAACCTGATTCTTTTCATTATCCCATTTATGTTGCGTCTGATTACTCATGACCGATTTATTTGCTTTGTTATCTGTAGAATTCTGCAATATTGGGAACTTGTTCCCACTTCATTTCTTGTCAAATTCTTCATAAACAAGTTACTTTATTGTAGACATCAGGCTCCTGAGATCCATTTTCCTTCATGTCTCTCTTGAAATGAGATGATATAATGACCTTAATGGGTTCTTCGTAAATGATAATATTTTAGTGCAAACTGTTCAAGGTGCTTCAGTATATATCTCCTATCTGACAACGTAGCTGGAACTTAAACCCCCCTTTTTATCTCTGAAATTGCGGAGATAAATGAAGGGAAAAAAACGTTTGTGTAAAAATGGTACTACCACTGTCATCCTCCACCCTAGAACTTTGTGATCCTTGCTGAGAAGGGTCTGGACCGTGGGTGCCCTATCTTTTTTTCTTTTTTAGGCAGGGTGCCCTATCTATAGCAACAATAAACGTTTGAGCTCTTTATGGTATGTGTGTTGCAGGTTATCACAGTTGAGCCAGGTTGCTATTTCATTGATGCTTTGCTGATACCAGCCAGGGATGATCCAGTTTCCTCGAAGTTCTTCAACTGGGAAGAGATTGAAAAATACAAAAGCTTTGGTGGTGTTCGGATTGAGAGTGACGTGGTATGTCTATATTTCCCTGTTCTACATAACTAAACTAGTACTTTAAGAGGATCATGCAAGCATGCTCTCTTTAATGCTAGTGCTAGTACCAGGTGCAACAGTACTTGTAACAACTAACTTCCGGAGAGTAGTTACTAAATCTCAGTTGGACCTTTGAAACTATGATTACGATTTACGAGTCACATAAAATGGATCGAATGTATTGTGGTAGTGTCCTTGATGAGGCAAACTGTCTTGCATTAGCTGGATGGCATAGAAGGAAAAAGATACTAGGACTATAAGATAAAAAAAATAGTTTCTCTTACAACACGAGAGACTAATGGATCATTTCAGGCGGTGACTGCCTCACATCACATTGATGGATCAGAGTGCAATAGCTTATTGACAACAATCATGCTTGATTTGAATAACTAGAGTTAGATCTAGGAAACTAAGAATCCACTGCTGACTTTACCAACAGCTTCCTTGAGATGTATATGCTGATTGTAATGCATTTTAGATTTTTATTTAGTTTCAAGCTTTTAGACGTAATATTGAAGATTTTCTTACAACTTGATGAAGATGTTCTACTTTTTGTGGTTAAGCTGGAGATGCTTTGACATGCTCCACCACCTTTACAGCTATCTTGTTATTATTCCTTGTGAACCTCAAGGAATTCGATAAGCATATTAGACAAATGTTGACCCTTCTCCTGCCAAGTCTGAGTAGACAATGACACAAGTTCTACAAATCTTATTTCCCACTTAATATCTGTCGTGTTATTCATAGTGAAACACAAGGAAATCAATAAGCATATATTTAATGATGTCTACAATAGTGGCACCTGCTCTGTAAAGTTTGAATAGACGTTGGTATAAATTCCTCGAATCTTGTTTCCCTACTAAATCAGTCATACCTCAAAAACAGCACAAATTCCTGTGCGCACGCATTTGATACTCTATTTTGGTGTTGACTTCATCTCTTTCTCTAGTGAGAATTACTGCAATCAAATTTATCTTTTTATGCTTTAGCCCTTGTTAGAATGCTAAACTTAATCTTGACTATTAACATCATAATTATGTTGTTTCCAGTATGTGACGGCGCATGGATGCAAGAACCTGACAAACTGCCCCAGGGAGACCTGGGAAATCGAAGCTGTAATGGCTGGTGCGCCATGGCCTGTGCGTGCGACAAATAATAGCCTGTCCAAAGCGTCCTGACCACCTTACCTCAGTTTTTCAGTGCTCCTGAACCCTGTCCAAGCAGATACATATGGAGATAAAAATAGGTGAACCTCCTGGGGTTGTTGGTCTGATGTTCATCGGTCATTTCATATGTTAAATTGTAGGATCTGTTGAAGACGGTCCCCTCGAGTATCGTCCTTTGAAAACTGAAAGGTACAAATAAAAGATCAAGAAAACTGAAAAGTACAATAAAAAGATCAGCTTGAGAGGAAAAGATGCCGTTCAATTTCCTTGCGATTAGTTCAAACGTCTCTGTTCATAACCATCAACTCTATTGGCATGAGAACAGCATGAGGTGCATAATCATGCAACACTTGTTTTGTGCAATCACAGGACTAATGTGGTATCATTAAAATGTCTTGCTTCATTCTACATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007817