Os12g0573200

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0573200| Description = GRAS transcription factor domain containing protein| Version = NM_001073627.1 GI:115489215 GeneID:4352595| Length = ...")
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Gene Name

Os12g0573200

Description

GRAS transcription factor domain containing protein

Version

NM_001073627.1 GI:115489215 GeneID:4352595

Length

3007 bp

Definition

Oryza sativa Japonica Group Os12g0573200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23838379..23841385

Sequence Coding Region

23838492..23840708

Expression

GEO Profiles:Os12g0573200

Genome Context

<gbrowseImage1> name=NC_008405:23838379..23841385 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23838379..23841385 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctcgtcggcggccgactcgttccccgcttgtggagatgatgcaatccgagacgtgtacggcatcggtggtggtggggaggaggacgatccgtccctcttcctctacctctccgacctcgcccccgtctccccctccgcctacctcgacctccccccctcgccgccgccgccgacgacgacggcgacgacgatggtgaaggagggggaggaggcgccggaggacctggtgctgccgttcatctcgaggatgctgatggaggaggacatcgacgacaagttcttctacgactaccccgacaacccggcgctgctccaggcgcagcagcccttcctcgagatcctctccgatccctcctccaactcccgctcctccaactccgacgacccccgcctctccccgacctcctcctccgacacctccgccgccatcaactcctacgacgccgccgccaccgccaccgccgttgccgccgccgcggtgcccgtgccgcagtacgagagcatcgagctcgatcccgccgcgttcttcgccgcggccaactccgacctcatgagctccgccttcctcaaggggatggaggaggcgaacaagttcctccccaccgagaacaagctcatcatcgacctcgaggcctcgtcggagaataattacctcaggggtctcgaggaggccaagaggttcctgcccagcgacgacaagcttcaggttggattcgctgcggcggcggcgcctgtggtgagcgtgaagaaggaggcggtggatgtggtggtggcaaccgcctcgggcggcggcggacgagggcggaagaacccgtacgacgacgaggagctggagctggagggagggaggagcagcaagcagaccgcggttcagggggacgatgtcgcggcgcgcgccatgttcgacaaggtgatgatgccctcccatgagaattgcaccgagatgatggagaagctgaggattgccatgaaggaggaggcggccaagaacgaggccagcgccggcgggaagggtgggaacgggaaggtgaagggagggcggcggggcgggagggacgtggtggacctgcgcacgctgctcatccactgcgcgcaggccgtggccaccgacgaccgccggagcgccaccgagctgcttaagcagatcaagcagcacgcgaaaccgaccggcgacgcgacgcagcgccttgctcattgctttgctgagggcttgcaggcgcggatcgctggcacgggcagcctggtgcaccagtcgctcgtggctaagcgcacctcagccgtggacatcctccaagcgtaccagctgtacatggctgccatctgcttcaagaaggtgtccttcattttctccaatcaaaccatctacaatgcttccttgggtaagaagaagatacacatcgttgattacggtatacagtatgggttccagtggccgtgcttcctgcggcggatatcacaaagggagggtgggccaccggaggtaaggatgactggcattgacctcccccagcctggtttccggccaactgagcgtattgaggagacagggcaccggctcagtaaatacgcccaggagtttggggtgccattcaagtacaatgccattgcagcggttaagatggagtcagtccgcaaagaggatctgaacattgatcctgatgaggtgctcattgtgaattgccagtatcaatttaagaacttgatggatgagagtgttgtgatcgacagcccaagggatattgtgctcagcaacatccggaagatgcagcctcatgtgttcatccatgcaatagtgaatggctcattcagtgcaccattctttgtgacacggttccgggaggctttgttcttttactcggccttgttcgatgttctggatgcaactaccccaagggaaagcgaacagcggctgctgattgagcaaaacatctttggacgagctgctctgaatgtcattgcgtgtgagggcatagatcgggtggagcgccctgagacatacaagcaatggcaggtgcggaatcaacgggctggcttcaagcaactgccattgaatccagaaattgttcaggtagtgcggaacaaggtcaaggactgctaccacaaggacttcgtgatagatatagatcaccaatggctcttgcaaggatggaagggacgaatactctatgccatctcaacatggacgccaaatgatgctctctcttatttttag</cdnaseq>

Protein Sequence

<aaseq>MGSSAADSFPACGDDAIRDVYGIGGGGEEDDPSLFLYLSDLAPV SPSAYLDLPPSPPPPTTTATTMVKEGEEAPEDLVLPFISRMLMEEDIDDKFFYDYPDN PALLQAQQPFLEILSDPSSNSRSSNSDDPRLSPTSSSDTSAAINSYDAAATATAVAAA AVPVPQYESIELDPAAFFAAANSDLMSSAFLKGMEEANKFLPTENKLIIDLEASSENN YLRGLEEAKRFLPSDDKLQVGFAAAAAPVVSVKKEAVDVVVATASGGGGRGRKNPYDD EELELEGGRSSKQTAVQGDDVAARAMFDKVMMPSHENCTEMMEKLRIAMKEEAAKNEA SAGGKGGNGKVKGGRRGGRDVVDLRTLLIHCAQAVATDDRRSATELLKQIKQHAKPTG DATQRLAHCFAEGLQARIAGTGSLVHQSLVAKRTSAVDILQAYQLYMAAICFKKVSFI FSNQTIYNASLGKKKIHIVDYGIQYGFQWPCFLRRISQREGGPPEVRMTGIDLPQPGF RPTERIEETGHRLSKYAQEFGVPFKYNAIAAVKMESVRKEDLNIDPDEVLIVNCQYQF KNLMDESVVIDSPRDIVLSNIRKMQPHVFIHAIVNGSFSAPFFVTRFREALFFYSALF DVLDATTPRESEQRLLIEQNIFGRAALNVIACEGIDRVERPETYKQWQVRNQRAGFKQ LPLNPEIVQVVRNKVKDCYHKDFVIDIDHQWLLQGWKGRILYAISTWTPNDALSYF</aaseq>

Gene Sequence

<dnaseqindica>114..2330#gctggtcaatccccctccttcctcgaatcttcgcttccccccccccccacccttctcgccgcgccaccgcctctacaaatccactaaaccccctcctccgcctcgccgccgccatgggctcgtcggcggccgactcgttccccgcttgtggagatgatgcaatccgagacgtgtacggcatcggtggtggtggggaggaggacgatccgtccctcttcctctacctctccgacctcgcccccgtctccccctccgcctacctcgacctccccccctcgccgccgccgccgacgacgacggcgacgacgatggtgaaggagggggaggaggcgccggaggacctggtgctgccgttcatctcgaggatgctgatggaggaggacatcgacgacaagttcttctacgactaccccgacaacccggcgctgctccaggcgcagcagcccttcctcgagatcctctccgatccctcctccaactcccgctcctccaactccgacgacccccgcctctccccgacctcctcctccgacacctccgccgccatcaactcctacgacgccgccgccaccgccaccgccgttgccgccgccgcggtgcccgtgccgcagtacgagagcatcgagctcgatcccgccgcgttcttcgccgcggccaactccgacctcatgagctccgccttcctcaaggggatggaggaggcgaacaagttcctccccaccgagaacaagctcatcatcgacctcgaggcctcgtcggagaataattacctcaggggtctcgaggaggccaagaggttcctgcccagcgacgacaagcttcaggttggattcgctgcggcggcggcgcctgtggtgagcgtgaagaaggaggcggtggatgtggtggtggcaaccgcctcgggcggcggcggacgagggcggaagaacccgtacgacgacgaggagctggagctggagggagggaggagcagcaagcagaccgcggttcagggggacgatgtcgcggcgcgcgccatgttcgacaaggtgatgatgccctcccatgagaattgcaccgagatgatggagaagctgaggattgccatgaaggaggaggcggccaagaacgaggccagcgccggcgggaagggtgggaacgggaaggtgaagggagggcggcggggcgggagggacgtggtggacctgcgcacgctgctcatccactgcgcgcaggccgtggccaccgacgaccgccggagcgccaccgagctgcttaagcagatcaagcagcacgcgaaaccgaccggcgacgcgacgcagcgccttgctcattgctttgctgagggcttgcaggcgcggatcgctggcacgggcagcctggtgcaccagtcgctcgtggctaagcgcacctcagccgtggacatcctccaagcgtaccagctgtacatggctgccatctgcttcaagaaggtgtccttcattttctccaatcaaaccatctacaatgcttccttgggtaagaagaagatacacatcgttgattacggtatacagtatgggttccagtggccgtgcttcctgcggcggatatcacaaagggagggtgggccaccggaggtaaggatgactggcattgacctcccccagcctggtttccggccaactgagcgtattgaggagacagggcaccggctcagtaaatacgcccaggagtttggggtgccattcaagtacaatgccattgcagcggttaagatggagtcagtccgcaaagaggatctgaacattgatcctgatgaggtgctcattgtgaattgccagtatcaatttaagaacttgatggatgagagtgttgtgatcgacagcccaagggatattgtgctcagcaacatccggaagatgcagcctcatgtgttcatccatgcaatagtgaatggctcattcagtgcaccattctttgtgacacggttccgggaggctttgttcttttactcggccttgttcgatgttctggatgcaactaccccaagggaaagcgaacagcggctgctgattgagcaaaacatctttggacgagctgctctgaatgtcattgcgtgtgagggcatagatcgggtggagcgccctgagacatacaagcaatggcaggtgcggaatcaacgggctggcttcaagcaactgccattgaatccagaaattgttcaggtagtgcggaacaaggtcaaggactgctaccacaaggacttcgtgatagatatagatcaccaatggctcttgcaaggatggaagggacgaatactctatgccatctcaacatggacgccaaatgatgctctctcttatttttagttgtttttttttttggcatcgcgacaaatataagatctaggtatttcaataagatggctagtggcagtatgtcatgtatgaagatcgatggtgttggtgttggtttgatggacccaatgacttgaggtatgcctatctagaatttggagtgcacttgtgattccaatgggttggttcttcttctgattcaaaccaattcatgcaatgcaggctatgagggagaattggtagcccaagttgttgaagccataagataaccaagcatgcatgtagatatccatgtttttatgtgatgttaattagttgcttctgttgtcatgttgcagcttagtgccacactaccacttagaaaatagacttaggtcctggtccggatgatgttcgctgcagcgtcaccggttcttgcgatcaatccagtcagttgatccggttgtaattgacaccagttactctgtttttactaggtgcttactgcactgtggcagacagtaacattgtaatatgctcaaaatgttgaactgggttttggctagtcttgtgctgttgtcaacctgagaactatcttttcggccaacttatttggtctattcatgatccatgttgcaacagagggtcaaacatttttgcccattgatgtgtgtgatattgtttttttaattattatttgcattgatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0573200, RefSeq:Os12g0573200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0573200&oldid=6138"