BGIOSGA007830

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Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007830, complete gene.| tag = OsI_064...")
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Gene Name

BGIOSGA007830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007830, complete gene.

LocusTag

OsI_06450

Ensembl Transcript ID

BGIOSGA007830-TA

Ensembl Protein ID

BGIOSGA007830-PA

Length

4384

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8207856..8212239

Sequence Coding Region

8207856..8207923,8208227..8208324,8208784..8209350,8210413..8210642,8210910..8211386
,8211502..8211689,8211798..8212239

Genome Context

<gbrowseImage1> name=IndicaChromosome02:8207856..8212239 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:8207856..8212239 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGCATCTGGGCAGCGGCAGCTGCAGCTTCTCCTCCCCACTGAGCCCTTTTGTCCTCACTCGCAGGGATCGGAGAGGGGTGAAGATGTCGGGTGCTGCTCTCGTCGCAATCGCGGCCTCCATCGGCAACCTGCTGCAGGGATGGGACAATGCCACCATTGCAGGTGCTGTACTATACATAAAGAAGGAATTCAAGCTAGAAAGTGAGCCCACTGTGGAGGGGCTAATCGTGGCCATGTCACTGATTGGTGCAACCATCATCACAACATTCTCAGGGCCTGTATCAGACTGGATCGGCCGGCGCCCTATGCTCATTCTCTCTTCAATTCTCTACTTCCTCAGCAGCCTCATCATGCTATGGTCCCCGAATGTCTATGTGTTACTGCTCGCACGCCTTATAGATGGATTCGGCATCGGCTTGGCTGTCACACTTGTACCTTTGTACATCTCAGAGACAGCTCCTTCAGAGATCAGGGGTTTGCTGAATACACTGCCACAGTTCAGTGGGTCAGGAGGGATGTTCTTGTCCTACTGCATGGTGTTTGGGATGTCACTGTTGCCGTCACCTGACTGGAGAATTATGCTTGGTGTTCTCGCAATCCCTTCGTTGTTTTTCTTCGGATTGACAATATTCTATCTGCCAGAATCACCAAGATGGCTTGTCAGCAAAGGGCGGATGGCTGAGGCAAAGAAGGTATTACAAAAATTACGTGGGAGAGAGGATGTCTCAGGAGAAATGGCTCTTCTTGTTGAAGGTTTGGAGGTTGGAGCTGACACTTCCATTGAAGAGTACATCATCGGACCGGCTATAGAGCCAGCTGATGAGCATGTTGTTGATGGCGATAAGGACCAAATAACACTGTACGGGCCTGAAGAGGGCCAATCATGGATTGCTCGACCTTCCAAGGGACCCAGCATTCTTGGAAGTGTGCTTTCTCTTACATCTCGTCATGGCAGCATGACCACGAGCGCAGAAGGGAAGGACATTGCACACCATGCTCATCGTGGAAGTGCTCTGAGTATGAGAAGAAGCAGCCTCTTGGAAGAGGGTGGCGAGGCCGTGAGCAGCACTGGCATTGGTGGGGGATGGCAGCTTGCATGGAAATGGTCAGAGCGAGAAGGCGAGGATGGTAAGAAGGAAGGAGGATTTAAAAGGATCTACTTGCACCAAGAGGAAGTGCCAGGATCAAGAAGGGGCTCAGTTATTTCACTTCCTGGTGGAGGGGACGCTCCTGAAGGCAGCGAATTCATACATGCTGCCGCTTTGGTAAGCCAACCAGCACTTTACTCCAAGGATATCATTGAACAGCGTATGTCCGGTCCAGCCATGATTCATCCATCAGAGGCAGCTGCCAAAGGTTCAAGCTGGAAAGATTTGTTTGAACCTGGAGTGAGGCGTGCGTTGTTAGTCGGTGTTGGAATTCAAATCCTTCAACAGTTTGCTGGAATAAATGGGGTTCTCTATTACACTCCACAAATACTTGAGCAAGCGGGGGTGGCAGTTCTCCTTTCCAATCTTGGCCTCAGTTCAGCGTCAGCTTCCATCTTGATCAGTTCTCTGACCACCCTACTGATGCTTCCTAGCATTGGTTTAGCCATGAGACTTATGGACATCTCTGGAAGAAGGTTTCTGCTTCTGGGCACAATTCCAGTCTTGATAGCATCTCTAGTTGTCTTGGTTGTGTCCAATGTTATCGACCTGGGTACAGTGGCCCATGCCGCACTCTCCACAATCAGCGTCATCATCTACTTCTGCTGCTTCGTCATGGGATTCGGTCCGATCCCCAACATTCTGTGTGCGGAGATCTTCCCCACTAGGGTCCGCGGCATCTGCATTGCCATCTGCGCCCTGACATTCTGGATTGGTGATATCATAGTCACCTACAGCCTCCCTGTGATGCTGAATGCCATCGGCCTAGCAGGTGTCTTTGGTATATACGCAGTTGTTTGCTCGATTGCCTTCGTGTTCGTCTTCCTCAAGGTCCCCGAGACGAAGGGCATGCCGCTCGAAGTCATCACCGAGTTCTTCGCTGTTGGTGCAAAGCAAATGCAGGCTACAAAGGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MWHLGSGSCSFSSPLSPFVLTRRDRRGVKMSGAALVAIAASIGNLLQGWDNATIAGAVLYIKKEFKLESEPTVEGLIVAMSLIGATIITTFSGPVSDWIGRRPMLILSSILYFLSSLIMLWSPNVYVLLLARLIDGFGIGLAVTLVPLYISETAPSEIRGLLNTLPQFSGSGGMFLSYCMVFGMSLLPSPDWRIMLGVLAIPSLFFFGLTIFYLPESPRWLVSKGRMAEAKKVLQKLRGREDVSGEMALLVEGLEVGADTSIEEYIIGPAIEPADEHVVDGDKDQITLYGPEEGQSWIARPSKGPSILGSVLSLTSRHGSMTTSAEGKDIAHHAHRGSALSMRRSSLLEEGGEAVSSTGIGGGWQLAWKWSEREGEDGKKEGGFKRIYLHQEEVPGSRRGSVISLPGGGDAPEGSEFIHAAALVSQPALYSKDIIEQRMSGPAMIHPSEAAAKGSSWKDLFEPGVRRALLVGVGIQILQQFAGINGVLYYTPQILEQAGVAVLLSNLGLSSASASILISSLTTLLMLPSIGLAMRLMDISGRRFLLLGTIPVLIASLVVLVVSNVIDLGTVAHAALSTISVIIYFCCFVMGFGPIPNILCAEIFPTRVRGICIAICALTFWIGDIIVTYSLPVMLNAIGLAGVFGIYAVVCSIAFVFVFLKVPETKGMPLEVITEFFAVGAKQMQATKA</aaseq>

Gene Sequence

<dnaseqindica>1..68#372..469#929..1495#2558..2787#3055..3531#3647..3834#3943..4384#ATGTGGCATCTGGGCAGCGGCAGCTGCAGCTTCTCCTCCCCACTGAGCCCTTTTGTCCTCACTCGCAGGTGGCCCTTGCCCTTTCTCTCTTCTTCTTCTTCTTCTCTGCTGCTGCTGCTGCTGCTGCTGCATACTTCCAGCATCCAGGGAGTGGCTGCCTCCTGGCTTTCCATTTGAGCCGCCTTCGATTCTGATCTGGGACCGAGGAGCACCCCGCTTCCTTCCTTCCTCGGTTCTTGGCCGTTTCTTTGGTCTTCTTTGGGAGGTGCGGTGATGGAGTTCTGCAAGAATTTTGGGAGTCCTGTGTTTGTTGTTATTGTGATTGCTGGTTCGGGTGTGTTCATTTCTTGCTGCTGATTTCTTGGATGCAGGGATCGGAGAGGGGTGAAGATGTCGGGTGCTGCTCTCGTCGCAATCGCGGCCTCCATCGGCAACCTGCTGCAGGGATGGGACAATGCCACCATTGCAGGTAAAAAGGTTTTACTTCCCGTGTCGTGCTAGATTGGTTATTTGGTTCAGAGTTTGTGAGTACTAGGAAATATGAACAGCTGTCAATTTTTTCTTAATTATCAGTGTTGGTGTACCTTCTAAATTTTTCAGATTAATAGACTGCTTTAGATCAGATGTTTGTTGAGTGCTAATTATGGTCTTCTAGTAACATGTCTGGTGTTGTTGTTTGAGTCCTGAGAGCAATTGGCACAATTGTTTATCAGCAAACTGGATCGCATGATATTAATAGTCTCTTAATTTTTCTAGATCTGTACTAATCTTATTGAAGAAAGAGATGTTCTAATCATAATTGTTAGCTATTGTGTTGTCTGTTGAATCATTACTGTTTGCCATTCTTTGTTCTGAACACCTGTAAAGATTGTTCTATCCAACAAGAAAGTGTAAATGTTAACAAGGCACAATTATTAAACTTCTTCAGGTGCTGTACTATACATAAAGAAGGAATTCAAGCTAGAAAGTGAGCCCACTGTGGAGGGGCTAATCGTGGCCATGTCACTGATTGGTGCAACCATCATCACAACATTCTCAGGGCCTGTATCAGACTGGATCGGCCGGCGCCCTATGCTCATTCTCTCTTCAATTCTCTACTTCCTCAGCAGCCTCATCATGCTATGGTCCCCGAATGTCTATGTGTTACTGCTCGCACGCCTTATAGATGGATTCGGCATCGGCTTGGCTGTCACACTTGTACCTTTGTACATCTCAGAGACAGCTCCTTCAGAGATCAGGGGTTTGCTGAATACACTGCCACAGTTCAGTGGGTCAGGAGGGATGTTCTTGTCCTACTGCATGGTGTTTGGGATGTCACTGTTGCCGTCACCTGACTGGAGAATTATGCTTGGTGTTCTCGCAATCCCTTCGTTGTTTTTCTTCGGATTGACAATATTCTATCTGCCAGAATCACCAAGATGGCTTGTCAGCAAAGGGCGGATGGCTGAGGCAAAGAAGGTATTACAAAAATTACGTGGGAGAGAGGATGTCTCAGGTATGTTTTGCTGAAAATTTTGATGTTCATTTCACCCATATTTCCAGCTGACCAGTTTAAAAACAATTTCTCCCAGATTCTAAACTCATGGTTAATACTAGAAAACATGTGTGGCATTGGTAACTGTTAATTTCTTGACACGAACTTAACATATGCAGAAATAGTGTATTTTTGAAAAAAAAGGGTAAAAGAAATCAAAATCTATTAAGCGCCTTCTATCGGTGCTCTTTTGAAAAAGCTTATGAATCTTCAAGTAAAAATTACTAAGTACACATAACTACACTAATTCATTTTCCATAGAAGGCAGAACATGGAATGTACAATCGTTATCTCACCAGGTAGAGCCCAAATGAGGTGTCCCAACTTTTTGCTGAGTCCTAATCTGGAGAAAAATAATCAGGTGATCTAGATAGACATCGCCCTCTTTTTTTTTTTTTTGGTAAGGGTAACTCTAGAATTTGGGGGGTGGGACCTGCTGGTATAATGTGGATGTGGGTCGACCCACGGGTCCTTATCTACTCTAGTTTAACTAAATGAACTATATTTTGCTTTTGAGATTTTAAAAGTGAAATTAAGTCCATCTAGTTGACCTAGAGTGGGTCAAGGAGCCCCACAGCGGCCATGCCTAACAACAGTGATTGTTCAGAAACGTTAGTAATGATTTATCCTTAAGTTCATGCTTTCCTCAAACTAATTATATAATACATGTGTCAACATCAAAATAGGCATATGCTGTTAACAAGTGGTTTCTCTATTTCTCCTCTACAACAGACTAAATGGACAGTATTCGGTTGGCTGAGAGCATAATATTGCTATTATTTTAAGTTCATCGAACTTCGCTGTAAGCTGGTTGTCCCCAGCTGCACTATGCTAGCTTTCTATTAAAGCTGGGCCCTTATATTTCTGTTATTTGTTTCTGGCACACCATTCATATTTATGTTGCTGCTTTATTCATAGTTACTACTTATTTATGCCAATGTTTATACCAATGTCCAAATAAAATCATGTAATCTACGTGAAAAAATAAAGTTGCATAATCATTCAAATTATCAAATTGCGCAGGAGAAATGGCTCTTCTTGTTGAAGGTTTGGAGGTTGGAGCTGACACTTCCATTGAAGAGTACATCATCGGACCGGCTATAGAGCCAGCTGATGAGCATGTTGTTGATGGCGATAAGGACCAAATAACACTGTACGGGCCTGAAGAGGGCCAATCATGGATTGCTCGACCTTCCAAGGGACCCAGCATTCTTGGAAGTGTGCTTTCTCTTACATCTCGTCATGGCAGCATGGTGAACCAGAGCGTGCCACTTATGGATCCTATAGTCACGCTTTTCGGCAGTGTCCATGAGAACATGCCTCATGCTGGAGGAAGCATGCGGAGTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATACGCGTCTGATGGTGCTGGAGGTGACTATGAAAACGAGTGTCCACAGCCCGTTGCTGTCCCGACAGACCACGAGCGCAGAAGGGAAGGACATTGCACACCATGCTCATCGTGGAAGTGCTCTGAGTATGAGAAGAAGCAGCCTCTTGGAAGAGGGTGGCGAGGCCGTGAGCAGCACTGGCATTGGTGGGGGATGGCAGCTTGCATGGAAATGGTCAGAGCGAGAAGGCGAGGATGGTAAGAAGGAAGGAGGATTTAAAAGGATCTACTTGCACCAAGAGGAAGTGCCAGGATCAAGAAGGGGCTCAGTTATTTCACTTCCTGGTGGAGGGGACGCTCCTGAAGGCAGCGAATTCATACATGCTGCCGCTTTGGTAAGCCAACCAGCACTTTACTCCAAGGATATCATTGAACAGCGTATGTCCGGTCCAGCCATGATTCATCCATCAGAGGCAGCTGCCAAAGGTTCAAGCTGGAAAGATTTGTTTGAACCTGGAGTGAGGCGTGCGTTGTTAGTCGGTGTTGGAATTCAAATCCTTCAACAGGTAGAGATGATACCAATTTCATAATTCTTTTTTGTACTGTCCAACATTGACGGTGTTTAAGATTTGTGTACTATTAAGAATTCACTAATTCCTTTTATGTTCTTTCCTTGTGCAGTTTGCTGGAATAAATGGGGTTCTCTATTACACTCCACAAATACTTGAGCAAGCGGGGGTGGCAGTTCTCCTTTCCAATCTTGGCCTCAGTTCAGCGTCAGCTTCCATCTTGATCAGTTCTCTGACCACCCTACTGATGCTTCCTAGCATTGGTTTAGCCATGAGACTTATGGACATCTCTGGAAGAAGGTACTAACTTGTTTCCTTGGTTTGCATCATCTTAGTACTACCAAATATACCAAACAAGAAATGCACCCAAGTTAGTACTAATTACATCATACATTGTTTCCTTTTTAGGTTTCTGCTTCTGGGCACAATTCCAGTCTTGATAGCATCTCTAGTTGTCTTGGTTGTGTCCAATGTTATCGACCTGGGTACAGTGGCCCATGCCGCACTCTCCACAATCAGCGTCATCATCTACTTCTGCTGCTTCGTCATGGGATTCGGTCCGATCCCCAACATTCTGTGTGCGGAGATCTTCCCCACTAGGGTCCGCGGCATCTGCATTGCCATCTGCGCCCTGACATTCTGGATTGGTGATATCATAGTCACCTACAGCCTCCCTGTGATGCTGAATGCCATCGGCCTAGCAGGTGTCTTTGGTATATACGCAGTTGTTTGCTCGATTGCCTTCGTGTTCGTCTTCCTCAAGGTCCCCGAGACGAAGGGCATGCCGCTCGAAGTCATCACCGAGTTCTTCGCTGTTGGTGCAAAGCAAATGCAGGCTACAAAGGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007830