BGIOSGA007839

From RiceWiki
Revision as of 03:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007839| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007839, complete gene.| tag = OJ1705_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007839

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007839, complete gene.

LocusTag

OJ1705_E12.24

Ensembl Transcript ID

BGIOSGA007839-TA

Ensembl Protein ID

BGIOSGA007839-PA

Length

1588

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8418265..8419852

Sequence Coding Region

8418265..8418462,8418652..8418713,8419368..8419408,8419596..8419852

Genome Context

<gbrowseImage1> name=IndicaChromosome02:8418265..8419852 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:8418265..8419852 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAACGATTCATTGGCTACAGGGCGTGTGATCGGAGATGTCCTGGATCCCTTCATCAGCACCGTCGATCTCACCGTCATGTATGGTGATGATGGGATGCCGGTCATAAGCGGCGTGGAGCTTCGCGCACCGGCGGTCGCGGAGAAACCGGTGGTCGAAGTTGGGGGAGACGATCTTCGCGTCGCATATACTCTGGTGATGGTTGATCCTGATGCACCTAACCCTAGCAACCCAACTCTGAGGGAATACCTCCACTGGATGGTGACTGACATCCCGGCTTCAACCGATGCTACATATGGGAGGGAGGTGGTGTGCTACGAGAGCCCGAACCCGACGACGGGGATCCACAGGATGGTGCTGGTGCTGTTCCGGCAGCTGGGGAGGGAGACGGTGTACGCGCCGGCGGTGCGCCACAACTTCACCACCCGCGCCTTCGCCCGCCGCTACAACCTCGGCGCGCCCGTCGCCGCCGTCTACTTCAACTGCCAGCGCCAGGCCGGCTCCGGCGGCCGGAGGTTCACCGGACCTTACACCTCCCGCCGCCGCCAAGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MANDSLATGRVIGDVLDPFISTVDLTVMYGDDGMPVISGVELRAPAVAEKPVVEVGGDDLRVAYTLVMVDPDAPNPSNPTLREYLHWMVTDIPASTDATYGREVVCYESPNPTTGIHRMVLVLFRQLGRETVYAPAVRHNFTTRAFARRYNLGAPVAAVYFNCQRQAGSGGRRFTGPYTSRRRQA</aaseq>

Gene Sequence

<dnaseqindica>1..198#388..449#1104..1144#1332..1588#ATGGCCAACGATTCATTGGCTACAGGGCGTGTGATCGGAGATGTCCTGGATCCCTTCATCAGCACCGTCGATCTCACCGTCATGTATGGTGATGATGGGATGCCGGTCATAAGCGGCGTGGAGCTTCGCGCACCGGCGGTCGCGGAGAAACCGGTGGTCGAAGTTGGGGGAGACGATCTTCGCGTCGCATATACTCTGGTACTATTTTCGTGCCATCTTTATACAATTTTAGTGTTAATACATTGGCGTATAAAACTTTTGCGCGTTAATTAATTATGTTACCTACCGAATTGGCACCACCTGATCATATATATGCATATAATATATATGTTCATCAGTTCATGCGTGGATTTATGCTAACTGTGTGAATACCCATCTATGTTGTAGGTGATGGTTGATCCTGATGCACCTAACCCTAGCAACCCAACTCTGAGGGAATACCTCCACTGGTGAGCACTATATAGTAGCTATAGCTAGCTACATCGATCTCAGTTAATTATCAATCAATTTAATTAGTGTCAATTTTTTTACATTCCATAAAATAAATTAAACCGATCATTTTGCACGCACAAACCTAGCTAGCTAGGGTATACGTGCATACGCATGCGCGGTGTAAGTGGCTAACCCGCGAAACTCACTTATAGACTAAGATAAGCCATTTATTTTGATCTATAAGTGGGTTCGCGGCTGACCCACTTACAGCCTCCCTGTGTGCGCAACAAACGGTGCAAATGCAGCTTGCAACTTGCATGCAGAAAAAACTGTGGGTAATTGTGTATAGTATAGATAGCTAGGGACCAAATATACACATGTAACAATGAATGCTGCACGCGTGTACGTCGATCAGCTACCGTACAAATGTGCGCCATGTCATGGATGTACACGCATGCGTTGTGTCCACGTGGTCGATCGGTGTGTGCGTTAGTTCATCTCGAACCACACAATACATACATAAATCGATCGATCGATCGATCGATCCGTGATGCAGTACAGCTAGATCATATGTATCGGGATCGATCAATATGTACATATATGGAACTCTATATATGGATCTAGGTGCTAACTAGCTACTTATCGATTTATGTCCATGCGTGTATGTGCAGGATGGTGACTGACATCCCGGCTTCAACCGATGCTACATATGGTACGTACAATATACAATCTCTACTTAACACTAGATTTATAGATCGATGAGACATGAGATCGAGATTCGAATAGTATAATATATACTTTTTCTGTTGGTAAACTGACCAACGTTATATATAAAATATTTAATAAATTGGTGATATATATGATCTGAGAGGCGCGGTTGTTTTGCGATGCGGATGCAGGGAGGGAGGTGGTGTGCTACGAGAGCCCGAACCCGACGACGGGGATCCACAGGATGGTGCTGGTGCTGTTCCGGCAGCTGGGGAGGGAGACGGTGTACGCGCCGGCGGTGCGCCACAACTTCACCACCCGCGCCTTCGCCCGCCGCTACAACCTCGGCGCGCCCGTCGCCGCCGTCTACTTCAACTGCCAGCGCCAGGCCGGCTCCGGCGGCCGGAGGTTCACCGGACCTTACACCTCCCGCCGCCGCCAAGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007839