Os12g0573800

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0573800| Description = Similar to Piccolo protein (Aczonin)| Version = NM_001073629.1 GI:115489219 GeneID:4352598| Length = 2962 bp| Defin...")
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Gene Name

Os12g0573800

Description

Similar to Piccolo protein (Aczonin)

Version

NM_001073629.1 GI:115489219 GeneID:4352598

Length

2962 bp

Definition

Oryza sativa Japonica Group Os12g0573800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23873794..23876755

Sequence Coding Region

23875943..23876545

Expression

GEO Profiles:Os12g0573800

Genome Context

<gbrowseImage1> name=NC_008405:23873794..23876755 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23873794..23876755 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatgtttaccattgactagcccagctcgaggtatttgcattacaagccgtgcactgtttgaattccaactctgtattcggactgaagactcacctgaggctgaggatgagcccaaaggtggcacattgattgaaggatgcactgaattcaccaacattttgagatcaacatcattcaccgaaactgtccgtctgtatggtgagaagtgtgggttgggtgtgaagtttcttctgcttgtaaatgcagttcaagcaacagttgatgttgagattatacattcacgtgcttgtggccttaatctgaagttatatgccaaaaccagtggcttcagcgatgtgctccgtctcttccgaggtgttgcacaatctagtcgcaaaattagttctgttgtggcggtggtgagacgtagtcaccttgatctctgtattgaagggtctccagcggatatcgatcttggtgagaagctgccttgtacaaggtgggagcacagatttggtgctggttttcatggaactgtagaggaagtggtgaagcttggtgatttcactaccatttctgtgaaagtcacctggaaagctgtcagcaagcttccgccttga</cdnaseq>

Protein Sequence

<aaseq>MACLPLTSPARGICITSRALFEFQLCIRTEDSPEAEDEPKGGTL IEGCTEFTNILRSTSFTETVRLYGEKCGLGVKFLLLVNAVQATVDVEIIHSRACGLNL KLYAKTSGFSDVLRLFRGVAQSSRKISSVVAVVRRSHLDLCIEGSPADIDLGEKLPCT RWEHRFGAGFHGTVEEVVKLGDFTTISVKVTWKAVSKLPP</aaseq>

Gene Sequence

<dnaseqindica>2150..2752#agcgagcgtcctcgattttcctcttgctagggtttgtgggagagatcgccggcggtggcggcggtggcggcggcggaggcggaggcggaggcggtgttgaggagaaatggaggtcgatggaggcggagacgagtcggcggcggcggcgatggctgaccccggccgcgggaagaagagaccgccttccccctcaactcctccgactccgagcgacgacggggaggactccgacgacagctgcgcggtcagcgacgaggaggaggaggaagacgaagacgaaggcgaggaggatcaagaaggtacaggatgatcactataattcttttactatctgaatggctcctgaatatttcgttcgacgagcctctgtaatcttgttcagttttcggtttttaaattttccccctctttgattccgactgaaatatgtaatgcagaaaacaacgtgctaagcgatttgcatattggtttacttttttttttttgcttgttcttgatgataagccacagagattctggttgaaagtaatttcaggaatttgattgtctcatgctatgaatctgctattgctgaataactgaaatgctgctcacttgttggcatgtgccctcactccatattgtactgtacaacagtacaagtttcagaaacagaagatgtgcattaggtacgtagctgagaaatatctgagtatctgactaacaacctacagttactaatgtgtagttgtatgaactatcaaggtgcggcgcagtgcagtgtgtgttcctcttctccacagggttacactcacacacttagaggatgttagcaattcaatgtctgcatgccgcaatataatgttacatacagtgcagtggcagtccatcattgagttaagctagtgcctccttgctttttttataagttcccttctttgattcagactgaaatataatgggaaaaaaggtgcttatctatttacttggttcttttagcttgtgattgactatctggattaggatttaggaaccggtgctttgctctttgattgggtgacacttcaacgaacatcactaagaacatcttgcttgaattagttcgtacctgatcctactaaactttggtaataataacacacacacacacacacaaagaaagaaatgagtgtgcaaccattcatgtacgttcagtgtatagtctttttgacttgtcgatttccatcgctatgttttctgtcacgcgtctaattttagcttccatacaaatgatagatggtggtagatcaaactccagagcatttgaaattgtttcagttgatttaattatcccatgattttttttatgtagggatgcaccgcccatttacggttgatgattttccaaggcttagtagtgatcattctgcgcagactgaagcgcggtatagatttccagatctttgccttcaaggccctttgccactcattcttttccgtgccttcaacgatcctctcactgacaaacgcaggcattggtttggttctgattaccgactcgatgacgaatctgaaagtaaatgccttctttaaattaacttctttgagttctctggtgctttcttttgtcatatcatcatctatagattactgtaaacctgcacatatttctcattctttagtcatcaattttgcagtcaatgtcaacagcgctcggaccgttgattgcttaaatgggtgtaggtgccattcgatgaatctgctccagttgattgatctgtaaatctctggatatcgccatacccagcctggacgtgccaaaatcttcgggttttttgcggtgcgggatgacttggaacctctgcgcaactatgtctttaggcatgcgattgacaattatgaagctgtctctgtgaaaccaaagacggtaatttagtttgcaaacatgtgactgtttgcttccatactcatgttttggcatattgacatttagtaattattttcgtaagtttggatatttctctcaatgcatgtagcacaatccaatctaacagtaagacttaaaataacatcgtcactgtacatagcatttttcttgattgcattcttacacatgtactggtggtatgtgatgttactgaagaataactcaaatacatgatgtaatacttggtgttcctcattgtagggtatggcatgtttaccattgactagcccagctcgaggtatttgcattacaagccgtgcactgtttgaattccaactctgtattcggactgaagactcacctgaggctgaggatgagcccaaaggtggcacattgattgaaggatgcactgaattcaccaacattttgagatcaacatcattcaccgaaactgtccgtctgtatggtgagaagtgtgggttgggtgtgaagtttcttctgcttgtaaatgcagttcaagcaacagttgatgttgagattatacattcacgtgcttgtggccttaatctgaagttatatgccaaaaccagtggcttcagcgatgtgctccgtctcttccgaggtgttgcacaatctagtcgcaaaattagttctgttgtggcggtggtgagacgtagtcaccttgatctctgtattgaagggtctccagcggatatcgatcttggtgagaagctgccttgtacaaggtgggagcacagatttggtgctggttttcatggaactgtagaggaagtggtgaagcttggtgatttcactaccatttctgtgaaagtcacctggaaagctgtcagcaagcttccgccttgaatggatagaggggcttctatctatgcattgtaaaaactggagtgttatctgagtggcatcttttgtaagctatttccatgtattagtatagcatttactcctaactctttagacttcgatctgccctagtgttatgggcaatcctgccagattaatgataaactcttggaaacatttgcgtgatggtaattgaatccttattttggtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0573800, RefSeq:Os12g0573800