Os12g0574000

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0574000| Description = Amino acid/polyamine transporter II family protein| Version = NM_001073631.1 GI:115489223 GeneID:4352600| Length = 3...")
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Gene Name

Os12g0574000

Description

Amino acid/polyamine transporter II family protein

Version

NM_001073631.1 GI:115489223 GeneID:4352600

Length

3523 bp

Definition

Oryza sativa Japonica Group Os12g0574000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23891293..23894815

Sequence Coding Region

23891487..23891576,23891695..23891757,23891867..23891910,23892013..23892175,23892271..23892406
,23892535..23892754,23892942..23893122,23893213..23893236,23893339..23893553
,23894074..23894471,23894552..23894802

Expression

GEO Profiles:Os12g0574000

Genome Context

<gbrowseImage1> name=NC_008405:23891293..23894815 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23891293..23894815 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgtgacgaggaaatggggcacggagacagatcgctgctgttcatcggagatgaggacgacgatctcgaggcggaccgcgacggcggctccacgccgtcgtccgacccgggctccttctccgaccggagcgaccctcccagcgtcgacgacatcgacgaggacgacgacgatgtcgtcggcgatggccgccgcgcgccccgcgacgacgacgacgaccagaggggcacgtggccacagagcttcaggcaatcgattgacatgatgagcgccgtgccgtcgccggcgatgagctcgatcatcacggcggcgagcccgaatctggggaggttggcggcggtggggagctccctcctgaagcgagccacgagcagcgcggtggggcaggagggctcgtcgctgccgctctccaggccgctgctgccgccgtcgtcgctgtcgcagctgtcgacggcgtcggggccgccggtgagggactcggcggacagcttgccgccgcgcgcgcggccgccaccgccgccgctgcagggggagtccgtggtgccgccgccgctgccgaggccgtcgtcggcgtgcctgagatccaactacatcgacctgccgccgccgtctaccaggtgcgggcagaagcaagccatcctcaatgggcttaatgttctgtgtggagttggaattctcaccacaagttacggaatcaaacaaggtggatggttaagcctgatcctgctgcccttgttgggttgctgttcttgctacaccggattgcttctgaagaaatgcatagacagttcaccgagcattgacacatatccagatataggacaagctgcgtttggtatttacggacggatattcgtgtcggttgttctttatctagagctatatgcatgcggtgtggagtacatcacgctgttaggtgacagtttgtcgtcagtatttccgtctgcagatctagcttttggtggaatctacttgaacgcgcacaatctcttcgccatcacaatggccttggcaattctaccatcagtttggcttaagaacctcagactcctctcctatctttctgcgggaggcgtgattgcgacgacgacagtaattgtttgtttgttctgggttgggattggggaaggagttgggttccaccctggtggaactgcactgaatctgacccactttcctgtggcacttggcctgtatggatactgctactcagggcactcggtttttccgaacatatattcgtcgatggaggaacgcccaaagttcacctttgtactgctgttctgcttcatagtagtcacgtttgtatatgctggagtcgctgtcgcaggatttctgatgtttggcgagtccacaatgtcacaattcactctgaacatgccacagcaatttattccctccaaaatcgccattgggatgacgattataaacccatacacaaagtatgccttgacattaacaccggtcgccctgtcgatagaggaggctctacctagaaggatgcagacttaccaagttggaatgtgtgttaggacagctcttgtcgcctcaactgttgttgtagctttgacatttccatactttgcactggtgatggcgttgcttggatctgtcttcacaatgctcgtggccctgatcctcccatgcgcatgctatctctctatcaagaagggttcaacaccattgtgggaggttgtcttatgcataacaatcatactgcttggcatcctgtgcgcctgcgttggatcgtacacttctgttagccaaatgataagcagatag</cdnaseq>

Protein Sequence

<aaseq>MDRDEEMGHGDRSLLFIGDEDDDLEADRDGGSTPSSDPGSFSDR SDPPSVDDIDEDDDDVVGDGRRAPRDDDDDQRGTWPQSFRQSIDMMSAVPSPAMSSII TAASPNLGRLAAVGSSLLKRATSSAVGQEGSSLPLSRPLLPPSSLSQLSTASGPPVRD SADSLPPRARPPPPPLQGESVVPPPLPRPSSACLRSNYIDLPPPSTRCGQKQAILNGL NVLCGVGILTTSYGIKQGGWLSLILLPLLGCCSCYTGLLLKKCIDSSPSIDTYPDIGQ AAFGIYGRIFVSVVLYLELYACGVEYITLLGDSLSSVFPSADLAFGGIYLNAHNLFAI TMALAILPSVWLKNLRLLSYLSAGGVIATTTVIVCLFWVGIGEGVGFHPGGTALNLTH FPVALGLYGYCYSGHSVFPNIYSSMEERPKFTFVLLFCFIVVTFVYAGVAVAGFLMFG ESTMSQFTLNMPQQFIPSKIAIGMTIINPYTKYALTLTPVALSIEEALPRRMQTYQVG MCVRTALVASTVVVALTFPYFALVMALLGSVFTMLVALILPCACYLSIKKGSTPLWEV VLCITIILLGILCACVGSYTSVSQMISR</aaseq>

Gene Sequence

<dnaseqindica>3240..3329#3059..3121#2906..2949#2641..2803#2410..2545#2062..2281#1694..1874#1580..1603#1263..1477#345..742#14..264#gtagggaggtgagatggatcgtgacgaggaaatggggcacggagacagatcgctgctgttcatcggagatgaggacgacgatctcgaggcggaccgcgacggcggctccacgccgtcgtccgacccgggctccttctccgaccggagcgaccctcccagcgtcgacgacatcgacgaggacgacgacgatgtcgtcggcgatggccgccgcgcgccccgcgacgacgacgacgaccagaggggcacgtggccacagagcttcaggtcggtatcgatctatctgactatctccgacggtgtcgcggatttttcagacgagattttttttgtttttttttttgcaggcaatcgattgacatgatgagcgccgtgccgtcgccggcgatgagctcgatcatcacggcggcgagcccgaatctggggaggttggcggcggtggggagctccctcctgaagcgagccacgagcagcgcggtggggcaggagggctcgtcgctgccgctctccaggccgctgctgccgccgtcgtcgctgtcgcagctgtcgacggcgtcggggccgccggtgagggactcggcggacagcttgccgccgcgcgcgcggccgccaccgccgccgctgcagggggagtccgtggtgccgccgccgctgccgaggccgtcgtcggcgtgcctgagatccaactacatcgacctgccgccgccgtctaccaggtgcgggcagaagcaagccatcctcaatggtgagttcaattaattacctcgctaattgttcatactggaatgcccccgatgaattgatcttgtgttattttgcaaatttgtaattcgccttttgtcaagtccaattgtttgtttgcgatagttcaattcagtaacaatcctgagtaaatccacttttgaaaatactttgaggtagcaatatttaatttaatttcgtccgcagaattaattcttgaaaataaaactgatgttgtggatttaatgcaggagcgtcggtcagtcggtgtgtacttccgtcttccaaaaaaaaaatataccatcgaaaactttttgagtgaatatcactaactgttctaaacaatttacggagtttggttcagatttatggatatattgcccccagtagtttgtttctgaatttttctgtgtctgtttgattaacagggcctgatgaatttttcatgtgtctgtttgattaacagggactgctaattctcacaaatttgcttctgaatcttcctttctttattggatttgcagggcttaatgttctgtgtggagttggaattctcaccacaagttacggaatcaaacaaggtggatggttaagcctgatcctgctgcccttgttgggttgctgttcttgctacaccggattgcttctgaagaaatgcatagacagttcaccgagcattgacacatatccagatataggacaagctgcgtttggtatttacggacggatattcgtgtcggtgtgtatttccagactcatttgagaaaacagttttcgcaaaatttacttccttcgtcccttactgtataatacatctgaatgtgcggatcgcttttttcaggttgttctttatctagagctatatgtaagtactcacagaattctgagactacctggtcatgttcattcatgtatcattgttatacatgagaatactgatatcttatatttgcaggcatgcggtgtggagtacatcacgctgttaggtgacagtttgtcgtcagtatttccgtctgcagatctagcttttggtggaatctacttgaacgcgcacaatctcttcgccatcacaatggccttggcaattctaccatcagtttggcttaagaacctcagactcctctcctatctttctggtaagtaacaacaccagacattgcacatgattgatctactcttccaaagctaatgctatatgttcataagtcagctccatcttttctttggtctggacaatagaaatgcactgtaatttccacttattgttaatctctgaatgaactatgagcttctcatgaccattttcttgtggaacatttacagcgggaggcgtgattgcgacgacgacagtaattgtttgtttgttctgggttgggattggggaaggagttgggttccaccctggtggaactgcactgaatctgacccactttcctgtggcacttggcctgtatggatactgctactcagggcactcggtttttccgaacatatattcgtcgatggaggaacgcccaaagttcacctttgtactgctgttctggtaataaagttctaaattagacaaatgaaatgctacagtactgtttcctgtaccctgatttagtacagtgtctgttacagtttgtcaattgtatatgtgctaatatatactatactctactgtttcagcttcatagtagtcacgtttgtatatgctggagtcgctgtcgcaggatttctgatgtttggcgagtccacaatgtcacaattcactctgaacatgccacagcaatttattccctccaaaatcgccattgggatgacggtacgatgaaactcttgatagttagtattatgctaatgcgtcaaaattcaatgcagtgatgttcattaccataattgatctttttcttccttcagattataaacccatacacaaagtatgccttgacattaacaccggtcgccctgtcgatagaggaggctctacctagaaggatgcagacttaccaagttggaatgtgtgttaggacagctcttgtcgcctcaactgttgttgtagctttgacatttccatactttggtgagtagtttattaactgaatattagttctttgataattgatgaaattaactccaaaacatcatgcatgctaatgctactcttgacccacttgtgctgcagcactggtgatggcgttgcttggatctgtcttcacaatgctcgtggtgagttttctgactaacctaaaattctgcattacttattactttgtttaacagatcaaatcactcagaaacttactatgatattttgctccacaaattgcatttgcaggccctgatcctcccatgcgcatgctatctctctatcaagaagggttcaacaccattgtgggaggtaattaactcatgatgcagataaaaaaaaaagcaccaacagatccacaaatatttttagtcctgaaaatgctagcgctgtctactaatacaagctataacttttctcttcctttcaggttgtcttatgcataacaatcatactgcttggcatcctgtgcgcctgcgttggatcgtacacttctgttagccaaatgataagcagatagtaggacgcacgaatgatccattttgtagctgttacagattcttttggattggaccggcatttttcgattcctttgtatttgttccttatttttggcagtaaagctgtatggatgatggttttactgtaagatggtatctgttgttgtccagaatacgtaatagcaacaacagtccagaacccagttctcattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0574000, RefSeq:Os12g0574000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0574000&oldid=6142"