BGIOSGA007872

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Revision as of 03:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007872| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007872, complete gene.| tag = P0503B0...")
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Gene Name

BGIOSGA007872

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007872, complete gene.

LocusTag

P0503B05.42

Ensembl Transcript ID

BGIOSGA007872-TA

Ensembl Protein ID

BGIOSGA007872-PA

Length

3712

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9122172..9125883

Sequence Coding Region

9122172..9122326,9122348..9122417,9123063..9123173,9123260..9123304,9124122..9124194
,9124271..9124383,9124486..9124545,9125342..9125389,9125477..9125545
,9125673..9125734,9125826..9125883

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9122172..9125883 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9122172..9125883 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCTCCTCCTTCGTCGGCGGCGCAGGCGGCGGTCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGTCGGGTCCGGCGCCGGAGCCGGCGGCGTCGGAGGGAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGCCGGTGCAAGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGACGGAAGATGAAAAAGAGATGGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTTCTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGACGTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATCAGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MSKLNPRAQEFVPSSRRAPPSSAAQAAVGLSADAPVFVSAAEYFVGSGAGAGGVGGRDSSSDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAILALNYSGMVLGTLPIRVSPSKTPVRPRSPRVMSN</aaseq>

Gene Sequence

<dnaseqindica>1..155#177..246#892..1002#1089..1133#1951..2023#2100..2212#2315..2374#3171..3218#3306..3374#3502..3563#3655..3712#ATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCTCCTCCTTCGTCGGCGGCGCAGGCGGCGGTCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGTCGGGTCCGGCGCCGGAGCCGGTCAACTCCATTTGGTCGTCGTCGGCGTCGGAGGGAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGGTCGGTGAGCTGAACGAGATTGTTGTTTTGGTCGCCTCTGCAGCTACGCGGATTGATTTGACCGGATATGGTTTGACCTTTTTTGCATTGAGTTCGTGATCGCGTGAGGATTTGGTGATTTACGCATTGCGATCGCCTAGAATGACGGGGTTTTAGGCCACGGTGATCATTTTTGTTCCTTCTTTTGTTTGTCTTCTTTTGCAAGATTCTTTTCTCCTTTTGTCTTGTTTTTTTTTTCAAAAATCTTGTGTTAAAATCGCAGTCTTTGAGCGTCAAATAAAAAGGATCTTTTTGCCAGTCTTGAAAAAAGAACAAAAAATTCAAGGACATAATCGATCGGATCGTGTTACTTTGATTTCAGATGTTTGATCGGTAGTAATCAGGAGGCTAGGGAGTGTTTAATGATCTGTTGTGGTTGTACGCTGGTTGATGAGGATTTGATTTGTGTATTTATTTTTTGATGTGATATGAGCACTGTGCTTGATGTCTACTAGGATTGGTTTTTGTGGACCTACATTTTTCGGCTGTTGATTCTCAGAACAAACACAAGTGTACTGATAATTGTGTGCATATTGAATTATTGATTGATTGACTCTGGTGGTGCTATGCTTTCATGATCAATTGACCCTGGCTTGGTTGTAACAGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGAGCAATCTAAAGAGAGTGGTGTATTTGAAGTGTGTTGTTTTTGTATATTTTGCTGTCTGATCATCTTTTTGTTTCCTCTCTAGGTGACTGAACAGAAGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTAAGTTATGATATTCTTGAGGAGACATGTTACTTTATGTTACTCCCTTGATAATGTGATTTCTTATGCTCGTAATGGTGTGCCTTCCATTTTCATGTGAAACATAACGGATAAAATTGTTATCTGCCCTCTTGGTTTCAGATTTTATGGTTTGCTTGGCACGGTCTTTAAAATAAGTTACTTGACTGCAAACTGATAAATAGCTGCCTTTACCGATTGGCATTCCTGTGGCAAAGTATAAGCTTGTGCTACAATTGAATTCCTCTGCACCATCTGTTTTGAGACGTGAATTGATGCAACCACGAAGATAACTGTTATTTTGAATTATGTGTTTTGTCTCTGTAGTATTTTTGGAAGGTGAAATTAAAACATTTGATGATTCAGTAGTAATTACTTGTTAGTTTGGAGTCCCTGGTTAGCACCTTCTTTTAGAGTGCAAAGATGAATGTCGAATTTCAACATATAGAGGTTCCCTGTTTGTATAACTAAATGGAGGCATAGCAGAGTGCTGACACATCATATTTACAATGTTCGCATGTGAAAGGTTAATCTGCTGTTTGTCAATGGTTATTTATCTTTATGTACTACAAAAGTGATACATGTATTACTGCAAGAATGTTATAACACCAACTGAATCGGAGTCATCTATGACTATATGACTAAAAGAACAAGTCTTTCAAAACAAATTCATATCTTTTTTGGACTGTAATGTATGTTACTTTTTTATCTGTTAATGATATCAGGTAAACACCTTTCTGTCTATGGATCCAATTGACTATTGGATGGATAACTTACACTCATATTTCTTTACCTGTAGGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGGTAACACCTTCACAACTATTGTTTATTTTGTGTATAGATAAACAGCAATCATAAAGTTATCCTTTCTTGTGTGCAGCCGGTGCAAGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGGTATGATAATAATTGGATCACATAATTCAAGTCTACCTGTAGAGCTTACTACCAGCATTTCCTTTTACACATCAACAACATGTAATGCTCTTTTCTGTACAGACGGAAGATGAAAAAGAGATGGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTACGTGAGTTTATATGCATGTCATTTTGATAATCCTTAAGGACCCTTAACATGTTAGATCTTGAAATTTAGAGTATAGTGTTACATTGTGCTGTGCTGTACCTGTTCAACAGAATTTTGATCTTGGTCGTTTGTGTTTAATCCAATGAACATTCTAAATGATATATGCGGTTCAATAAATCCTACTTAAGCAACATCATCTGCTTAAATATTCTAAAATGAGCTGAGGCTGATATACATGTTTCTAACATGTTGATTCTTGATATTTTCTCTGCTGAAATTCTGCACTAGTTTTAATGACTATTATTTCGCGCCGTTGTTAACACATGAACATTGCAAGCAATGGACCCATGATTTAATGCATAACTTTTACTCCCACATTGAATTGAGGTCTTGTTTGTTATGGAATAATATAGTATGTACTTCTGTACTATTTTAGATGCCGTTATTCTTTACTTATCTGTCCTTTCCCCTAAAGTCTTTATGTGTGCCCAGTGAATATATTGATTTTGAAGTGATACCAAGTGTCTTCAAGACAGATACTTAAGTATGTAGATATTCAGAAAAGGGTAGTGTGATATTTTTTTTTCTTTCAGTGCCTAATTGCCAGATTTCATGATAATATGGGGTCTCAGGCTCATCACATTGTTTTTTAGATTATTTTTTTCAAAAAAGAACTAACCATATGATTTTCTTTTCCCTGTGGTACAGTAATATTGACCTGAGACTGAGTTTGTGTATGTTCTATTCTCCAAGAGTCAAGCTGCTTTACATAATTGTCTTCCTAACTGTGCAGGTTACAGAAGAAGATGTAAAGATTTTCTTTCAGCAGCTTTGTGGGAAGGTGTGCCACATAAGTACATAAAACTTGCTTTTCTCTTTCCTTTAGACCTTCTGCTGAAACTAACAGTACCTTGCACTGTTCTGTCAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGACGTGCATTGCATTTGTTGAGTTTGCTCAAGTAAGTAGAGCAAGGTTTCTCAGTGCTATAATTTTGTAGTACTATACTCATAAAGTGCATTCCAACCCATGACTTGGTAGTTGTTCAGTGTGTTTGAAACGCCGATTCGAATGTTATTGTTTTGCAGGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATCAGGTAAAGAGTAAATCCAATGTTTTGAAGTTGATGCAGGAGCATCATGAAGAATCATTATTTGCTTTGCCCCATCCATTCTCCATTGTTGCAGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007872