BGIOSGA007873

From RiceWiki
Revision as of 03:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007873| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007873, complete gene.| tag = OJ1134_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007873

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007873, complete gene.

LocusTag

OJ1134_F06.6

Ensembl Transcript ID

BGIOSGA007873-TA

Ensembl Protein ID

BGIOSGA007873-PA

Length

3800

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9147924..9151723

Sequence Coding Region

9147924..9148013,9149276..9151321,9151454..9151723

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9147924..9151723 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9147924..9151723 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCATGGTTGCGGCGACGGGGAAGAGCAGCGCGGGCGGCGGCGTCCACGGCCGCGCCGGTGATGGGGAAGAGCGGCGCGACGCAGCGCCGCCTCCCCCTCCTCCCGGCGGAGGCGCGAAGCCCGAGCCGCCGCCGACGGTGGCCACCCACACCCGCCCCCTCGGGATCATCCACCCGCCCCCCGACATCCGCGTCATCATCGAGAAGACGGCCACCTTCGTCTCCAAGAACGGCCCGGAGTTCGAGCGCCGCATCATCTCCCACAACGCCGGCAACGCCAAGTTCAACTTCCTCCAGCCCTCCGACCCCTACCACGCCTACTACCAGCACCGCGTCTCCGAGCTCGCTGCCGCTCCCCCCTCCGCCGCCGCCTCCGCCGCCGACGTGGCCCCCGAGCCCGACGAATCCGGCGCCGCGCCGCCGCCGGCCGACTCCGCTGCCGCGCCCACCGTCGATGGCGAGGCGGCGAAGGCGGACCACTCTGCCCCATTCCGCGTGCCGCCGCCCACCAAGGTGCTGGTGCCACCCAAGGCGGAGCTCTACACGGTGCATCTGCCCGAGGGGATCACCGGGGAGGAGCTGGACATCATCAAGCTGACCGCGCAGTTCGTGGCGCGCAACGGGAAGAGCTTCCTGACGAGCCTGGCGCAGCGCGAGAGCACCAACCCGCAGTTCCACTTCATCCGCCCCACGCACAGCATGTTCACCTTCTTCACGAAGCTCACCGACACCTATTCGAGGGTGCTGAACCCGGTCGAAGGCATGCCTGCCCTACTGAAGGACCTACAAGATGGGGCGAAGGACCTGACCACCGTGTTGGAGCGGTGCCTGAACCGCCTGGAGTGGGACCGGTCGCAGGAGCAAGCGAGGCAGCAGGCTGAGGATGAAATCGAACAGGAGAGGATGCAGATGCAGATGATCGATTGGCATGATTTTGTTGTTGTCGAGACGATCGAGTTTGCAGATGATGAGTGCGAGGGACTCCCTGTGCCACTTACGCTGGAGGAGTTGAAGCGTCGGAAGAGGATTGAGGACCTGGGAGAGGAGGAGGCAGCCATGGAATTGGCCGAGCCAGTGAAGGATGTTGAGATGGAGATGGACGAGGAGGAGATTCAACTTGTTGAGGAAGGAATGCGTGCAGCAAGGCTCGAGGAAAACGAAGGAGGAGTTCAAGTTAAGCTTGCTGGTGATGAGGAGCCGCCTATGAGGATTGTCAAGAACTACAAGAGGCCTGAGGAGAGAATCCCTGCGGAGAGGGACCCAACGAAATTCGTTGTCTCACCAATAACTGGGGAGCTCATTCCAATTAGTGAGATGGAGGAGCACATGCGCATCTCGCTTATTGATCCAAAATATAAGGAGCAGAAAGAGCGGATGTTGGCAAAAATTAAGGAGACAACACTTGCTCCTGATGATGAAATCTCCAGGAACATTGTGGGTCTTGCCCGTACCAGGCCAGACATCTTTGGAACAACAGAGGAAGAGGTCTCTAATGCTGTCAAGGCAGAAATTGAGAAGAAAAAGGATGAACAGCCAAAGCAGGTTATTTGGGATGGCCATTCTGGTAGCATAGGTCGTACTGCCACACAGGCTCTGTCTATGGGCGGCGAGGAACAGGTTGATGCTTCGAATGTTCCTGGTCCAGCTCCACTTCCCCGCCCTCCCATGCCATTGCTTAGACCTCCTCAGCCACTTCCACTGGTTAATGTTCCACGCTTTCAACCTAGTGCAATGCCATATCCCCCACACCAACAACCTCATCTCATGCAAGGAGTTCCACATATGATGCCTACCATGCATCCGCCTCCACCACCGCCAATACCAGGTCAGCCGCAGGTGCTTAGGATGCCAGGTTCAATGGGTCCTATGCCAACCAATATACCTCCGCCTCCACCAGGCCAAAATCCCTACATGCCTGGCCCGCCGCGTCCATACTCCATGCCTCCACCGCCGCACATGCCAACCATGGCAACCATGGTCAACCCCATTGGGATTCCTCAGCCTCCACCACCTTTGCCTCCACAACCACCTGCTGAGGAGCAGCCACCTCAACCTGATGAACCAGAACCTAAAAGGCTGAGAACAGATGACGCTTCTCTTATACCAGCAGAACAGTTCCTTGCTCAGCACCCGGGCCCTGCTCACATCTCAGTGTCTGTACCCAACCTTGATGAAGGAAACCTGCGAGGCCAAGTGTTGGAGATCGGTGTCCAATCACTCTCAGACACAGTTGGCAGTCTAAAGGAGCAGATTGCTGGAGAGTTGCAGCTCCCTGCTAATAAGCAGAAGTTGAGCGTGCGGACTAGTTTCCTCAAAGACAATCTCACTCTTGCTTACTACAACATTGGCCCTGGAGTGGTGATCAATTTAACACTGAGGGAGCGTGGTGGGAGAAAGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MSMVAATGKSSAGGGVHGRAGDGEERRDAAPPPPPPGGGAKPEPPPTVATHTRPLGIIHPPPDIRVIIEKTATFVSKNGPEFERRIISHNAGNAKFNFLQPSDPYHAYYQHRVSELAAAPPSAAASAADVAPEPDESGAAPPPADSAAAPTVDGEAAKADHSAPFRVPPPTKVLVPPKAELYTVHLPEGITGEELDIIKLTAQFVARNGKSFLTSLAQRESTNPQFHFIRPTHSMFTFFTKLTDTYSRVLNPVEGMPALLKDLQDGAKDLTTVLERCLNRLEWDRSQEQARQQAEDEIEQERMQMQMIDWHDFVVVETIEFADDECEGLPVPLTLEELKRRKRIEDLGEEEAAMELAEPVKDVEMEMDEEEIQLVEEGMRAARLEENEGGVQVKLAGDEEPPMRIVKNYKRPEERIPAERDPTKFVVSPITGELIPISEMEEHMRISLIDPKYKEQKERMLAKIKETTLAPDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGRTATQALSMGGEEQVDASNVPGPAPLPRPPMPLLRPPQPLPLVNVPRFQPSAMPYPPHQQPHLMQGVPHMMPTMHPPPPPPIPGQPQVLRMPGSMGPMPTNIPPPPPGQNPYMPGPPRPYSMPPPPHMPTMATMVNPIGIPQPPPPLPPQPPAEEQPPQPDEPEPKRLRTDDASLIPAEQFLAQHPGPAHISVSVPNLDEGNLRGQVLEIGVQSLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNIGPGVVINLTLRERGGRKK</aaseq>

Gene Sequence

<dnaseqindica>1..90#1353..3398#3531..3800#ATGTCCATGGTTGCGGCGACGGGGAAGAGCAGCGCGGGCGGCGGCGTCCACGGCCGCGCCGGTGATGGGGAAGAGCGGCGCGACGCAGCGGTGCGGGCGGCGGCGTCTGCGGTGGTGTCAGGCGTTGGGGCCTGGGGGAGAGCCACGCGAGCGACCGGGCGTTGAGGGCTGGCGGCGGCTTGTGTGGGATTGGGGATGGGGAATAGAGCTAGAGTTTTGATGCATATATGGGCCTTCAAGCACATATGGGCCACAAGTCCACAACGGCATGGGCTAGCTACCTCAACTTGTTAAGGCTCGCGAGCCAGCTCGAGCTAGTTCGTTATCTCTAACGAGCTAAAAGTAGGGCTGTCAAAAAAGCTCGAGGCTTGCGAGCTGCTCGAGCTTGGCTCATCCTAGACTCAATTCAAGCTCGGCTCGAGCTCCAAACGAGCCGAGCCCGAGCCTCTCCCTAAGCTCGCGAGCTTTGTCGAGCCGAGCTCGAGCTTCCAACGAGTCTAATAATATATGATTTTTATTGTTATTTAATAAATTAGGATATCAAATATGTTATTTGTATGCCTTATATTGACATCATATATTTATTTTATTCTTTTTTCCTCTTTTATTAATATGATGAACTAGAAATTAATTATTTTTTTAATTATTTTTAAAAGATTATTTTTGAAATATATATTGTTTTACTTAAAAAATCCAGCTCGGTAGTCGAGCTCGAGCTTGGTCGAGCTCGAGCCGAGCCTGTCAACAAGCTCGAACATTTTATAGGCTCGGCTCGAGCTTGTATCGAGCTCGAGCCTAGGCAGATGAGCTCGGCTCGTTGACAGCCCTAGCTAAAAGGCCAGCTCGGCTCGTTAGGAAAATAAAACGAGCCGAGCCGAGCTTGGCGCGAGTCGAGCGAGCTAACGAGGCACGAGCTTTTCATCCAGCCCTAGTCATGCCGCACTCCACAACATTTTTCTCTAATTTCCCTTTCATTCCTTCCATTTTTCCTTCTCAAAATTTGGCGGGCCACGTCGTGCCGACGGGCCGCCACCAGGCCCACGACCCCCAATCGGGCCCGTGCCGGCAAAGGCCTACCGTGCCTTAACAGGCCGGGCGGCCCGTTTGGCCCTTAGAACCGACCTGTCTCCTCCTCTCTCTTCAGTCTCTCACCGCTTCTCGCTGAGACGAGACGAGACGCGTGCGTCACAGCAGCTCACGATTCCGTCGCGCAAATCCTCCCCGATCTAAACCTAAACCCACCCCACCCCACGCCGACGAAACCCTAATCCCCCTCGCCTCCGCCGCCATGGGGGCCTGCCATCCTGCCGCTCCCGGCGCCGGACGGCGACGGCGACTCCCATCCGCAACAGCCGCCTCCCCCTCCTCCCGGCGGAGGCGCGAAGCCCGAGCCGCCGCCGACGGTGGCCACCCACACCCGCCCCCTCGGGATCATCCACCCGCCCCCCGACATCCGCGTCATCATCGAGAAGACGGCCACCTTCGTCTCCAAGAACGGCCCGGAGTTCGAGCGCCGCATCATCTCCCACAACGCCGGCAACGCCAAGTTCAACTTCCTCCAGCCCTCCGACCCCTACCACGCCTACTACCAGCACCGCGTCTCCGAGCTCGCTGCCGCTCCCCCCTCCGCCGCCGCCTCCGCCGCCGACGTGGCCCCCGAGCCCGACGAATCCGGCGCCGCGCCGCCGCCGGCCGACTCCGCTGCCGCGCCCACCGTCGATGGCGAGGCGGCGAAGGCGGACCACTCTGCCCCATTCCGCGTGCCGCCGCCCACCAAGGTGCTGGTGCCACCCAAGGCGGAGCTCTACACGGTGCATCTGCCCGAGGGGATCACCGGGGAGGAGCTGGACATCATCAAGCTGACCGCGCAGTTCGTGGCGCGCAACGGGAAGAGCTTCCTGACGAGCCTGGCGCAGCGCGAGAGCACCAACCCGCAGTTCCACTTCATCCGCCCCACGCACAGCATGTTCACCTTCTTCACGAAGCTCACCGACACCTATTCGAGGGTGCTGAACCCGGTCGAAGGCATGCCTGCCCTACTGAAGGACCTACAAGATGGGGCGAAGGACCTGACCACCGTGTTGGAGCGGTGCCTGAACCGCCTGGAGTGGGACCGGTCGCAGGAGCAAGCGAGGCAGCAGGCTGAGGATGAAATCGAACAGGAGAGGATGCAGATGCAGATGATCGATTGGCATGATTTTGTTGTTGTCGAGACGATCGAGTTTGCAGATGATGAGTGCGAGGGACTCCCTGTGCCACTTACGCTGGAGGAGTTGAAGCGTCGGAAGAGGATTGAGGACCTGGGAGAGGAGGAGGCAGCCATGGAATTGGCCGAGCCAGTGAAGGATGTTGAGATGGAGATGGACGAGGAGGAGATTCAACTTGTTGAGGAAGGAATGCGTGCAGCAAGGCTCGAGGAAAACGAAGGAGGAGTTCAAGTTAAGCTTGCTGGTGATGAGGAGCCGCCTATGAGGATTGTCAAGAACTACAAGAGGCCTGAGGAGAGAATCCCTGCGGAGAGGGACCCAACGAAATTCGTTGTCTCACCAATAACTGGGGAGCTCATTCCAATTAGTGAGATGGAGGAGCACATGCGCATCTCGCTTATTGATCCAAAATATAAGGAGCAGAAAGAGCGGATGTTGGCAAAAATTAAGGAGACAACACTTGCTCCTGATGATGAAATCTCCAGGAACATTGTGGGTCTTGCCCGTACCAGGCCAGACATCTTTGGAACAACAGAGGAAGAGGTCTCTAATGCTGTCAAGGCAGAAATTGAGAAGAAAAAGGATGAACAGCCAAAGCAGGTTATTTGGGATGGCCATTCTGGTAGCATAGGTCGTACTGCCACACAGGCTCTGTCTATGGGCGGCGAGGAACAGGTTGATGCTTCGAATGTTCCTGGTCCAGCTCCACTTCCCCGCCCTCCCATGCCATTGCTTAGACCTCCTCAGCCACTTCCACTGGTTAATGTTCCACGCTTTCAACCTAGTGCAATGCCATATCCCCCACACCAACAACCTCATCTCATGCAAGGAGTTCCACATATGATGCCTACCATGCATCCGCCTCCACCACCGCCAATACCAGGTCAGCCGCAGGTGCTTAGGATGCCAGGTTCAATGGGTCCTATGCCAACCAATATACCTCCGCCTCCACCAGGCCAAAATCCCTACATGCCTGGCCCGCCGCGTCCATACTCCATGCCTCCACCGCCGCACATGCCAACCATGGCAACCATGGTCAACCCCATTGGGATTCCTCAGCCTCCACCACCTTTGCCTCCACAACCACCTGCTGAGGAGCAGCCACCTCAACCTGATGAACCAGAACCTAAAAGGCTGAGAACAGATGACGCTTCTCTTATACCAGCAGAACAGTTCCTTGCTCAGCACCCGGTAATACTTCTTGATATATTTCTTCTCCACTTTCCTGTTTTCTACTAAACATTCTTGTTAGTCTTGTTCTTTTTGTATGCGTATATTGAATTTTAAGAATTTCCATGTGCTAATTTCTTCTCTTCCCTGCAGGGCCCTGCTCACATCTCAGTGTCTGTACCCAACCTTGATGAAGGAAACCTGCGAGGCCAAGTGTTGGAGATCGGTGTCCAATCACTCTCAGACACAGTTGGCAGTCTAAAGGAGCAGATTGCTGGAGAGTTGCAGCTCCCTGCTAATAAGCAGAAGTTGAGCGTGCGGACTAGTTTCCTCAAAGACAATCTCACTCTTGCTTACTACAACATTGGCCCTGGAGTGGTGATCAATTTAACACTGAGGGAGCGTGGTGGGAGAAAGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007873