BGIOSGA007908

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Revision as of 03:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007908| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007908, complete gene.| tag = P0613F0...")
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Gene Name

BGIOSGA007908

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007908, complete gene.

LocusTag

P0613F08.22

Ensembl Transcript ID

BGIOSGA007908-TA

Ensembl Protein ID

BGIOSGA007908-PA

Length

2893

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9877023..9879915

Sequence Coding Region

9877023..9877633,9877959..9878061,9878164..9878223,9878376..9878450,9878536..9878610
,9878694..9878774,9879287..9879478,9879583..9879768,9879868..9879915

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9877023..9879915 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9877023..9879915 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCACCACCACCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCGCTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCCTCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGCGTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCCCGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGTGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTTGGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGACCGAAAGAGAACCCTTAAACAGATCGATGATTTCTTCAACAAAAAGGTTGCTCCAAAGGAGCTTGTTGATGAAATAAAGGAAATCAGTCAGGCTCTGCTGCCTTCTACTGGTACCAAGAGCCAACCAGCAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAG</cdnaseq>

Protein Sequence

<aaseq>MAATTTILSSAAPTPLTAPPRARARAPAARRRRLRARDILGAALGLANGGASAALAAPLSYEETLRLSTDSGGGGGGGGEFALPDLGLGGVLDFVAQNPLVAAAGVAAVALPLVLAQVLGGASKPYGVVSAAAAYRALVEEPGAQLVDIRPPGDARQSGAPDLREAKKKAAAVPYDGEDKNGFLKKLSLRFKDPENTTLVILDKFDGNSELVAELVTANGYKAAFAVKDGAEGRRGWLSSSLPWTAPKKGFSLSDLIGDGTDGLPVTLGLAAATGLGILAYTEIETVLQFLGSAAIVQLVASKLIYAEDRKRTLKQIDDFFNKKVAPKELVDEIKEISQALLPSTGTKSQPAITEAAPATAEAAPAAATATAAPPAAPVEETSTEAAPAEPTPLSPYTNYPDLKPPSSPSPLAPAEATKNESESESAATESAPAVNSAPVAEAAPEAAPPAAPRPLSPYPNYPDLKPPSSPSPSAP</aaseq>

Gene Sequence

<dnaseqindica>1..611#937..1039#1142..1201#1354..1428#1514..1588#1672..1752#2265..2456#2561..2746#2846..2893#ATGGCCGCCACCACCACCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCGCTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCCTCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGCGTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCCCGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGTGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTGAGCACCTCAAATCTTTGCTGCTAATTGCAATGTGGTTATATTCTTAATAATCTCTCTTGTTCATCAATTCTGTATGGTCCGAGTTCATTTCAGGGAAAAAGAAACAAAAATTTTCTTTTATTTTTGCTGCAAATGGAACACAATAGCAATGTTCAGAGTTGGCTACATTTTTTTCTTTCTGAAGAAGAAGATTGAACAATATCACAAGAAATCTGTGAACAACTGTCAGACTTCAAATAATTATACCATCAAGTGTACATGATTCAATTTGTTTATTTTCTCCTCCTGAACATTTATTTAGCTTGGATATTATGCAAACCAGGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGGTATTTAACTCTTTGCACAGCTTTGTTCTCGGTTTCTCGCTGTGAGCTGACATTTACATTCGCTCAACAAAAATGTCACCATTGGCTAGTGTTCAACTGCAGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGTGAGTTATCATTATCAATATGACCTTTTGAGGATGTGTCAACTATGTTTGATTTAATTTCTTTGTATTCTAAGGTCTCGATGCAACTCTCTTGTCGATTCGAATTTGTATATATGTTGTCGAATTCTGATTATGACGTGTAAAAATACCAGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGGTTGATCAGCTTGGAAGTTTTTTTTTTTGATGTTTTGTGGAGTTGCTTCTGTGTTCTTACCGATCATGTAATATCTATGCTGTAGATAGAGACTGTGCTTCAGTTTTTGGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGTGCCTACTCTTCTGAATGAACTTCAGAGATATGAACAACGTTCCTTTTCGATGACAAGCTCTTACTGTTGTGCTGCTTACAGGACCGAAAGAGAACCCTTAAACAGATCGATGATTTCTTCAACAAAAAGGTTGCTCCAAAGGAGCTTGTTGATGAAATAAAGGTAGCCATCTATCTTACTGAATATTCAGTTTCTTTGTTTCTCACTGACTAATATTTCTTAATAGGATCAAGTTCATTCCTGGAGAGTTTAGGCATGCATGAACCTATTGTATTTAGTTTAGTAGCATTCCTAGCAGGTACACCGCTAATAAGTCTTGTAAGTAGAAACATCAAGACCAAAAAAATGTACTAAACATCAAGTTCTTTGAATTTGCATTTTTGTCAAACCAATCAAAACATAGTTAGAACTTCAGATTTATGTGGACCTCATGACCTCTGTTGCCAACTGTTCACAGTATTGTGTGATTGGTACTATTAGCAAGATGGATAAGGTGCAAAATGGATGTAACATTCAATATATTTACCTGGTTTTCCTGATGGGATTTGCAGTTTGCATTGCCAGACTCTGCTGTCCCTTTTTTCTGAACTCAGAAAACTCACATTCTTCACATAGTAAATACTCATTACAAGGTTTTGTTCTGTAAAATGGTAATACCCTCTTGCAATCTGCAGGAAATCAGTCAGGCTCTGCTGCCTTCTACTGGTACCAAGAGCCAACCAGCAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATGTAAGTCCACACCTGATATATACTCATTGCCATTCATCTCTTTCACCTGATAAATCATTCCTTGACATAGTGTTCATCACTCTGCATTTGCAAATTCTATGCAGTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATGTAAGCTAGCTACAGCTTCTCAAGCTCCATTGCCATATGAACATAAGCTGCAAACAATGCCATTGTCATCAAACCTACATTTGTGAATTTGCAATGCAGTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007908