BGIOSGA007918

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Revision as of 03:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007918| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007918, complete gene.| tag = SIP7| ...")
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Gene Name

BGIOSGA007918

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007918, complete gene.

LocusTag

SIP7

Ensembl Transcript ID

BGIOSGA007918-TA

Ensembl Protein ID

BGIOSGA007918-PA

Length

3779

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10077333..10081111

Sequence Coding Region

10077333..10077800,10078935..10079054,10079609..10081111

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10077333..10081111 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10077333..10081111 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAACAACCCGCTGCTGCCCAGCCATCATCATCAGCAGCGTCGGGAGCAGGAGCAGGAGCAGCGGGCCCGGTTCTTGGCAAGGTCGCGGGGCAGGAGGGTGCCTCCACCTCCGCCGCCGCGGCGGTAGCTGCTCGTCGGGGTGAGGGTGACTGCCGCGGGGAGGAGGAGGTGCCGCTGCGGGTGCGGCTCGGGAGGGCCGCGAGGAGGCGGGCTGGGCCCTGCACGCCGTCGCCGTCGTGGAAGCTGGAGGGGGAGGAGGTGGAGGTGGCGGCGGGGGAACTGGCTCCGGTGCACCCGGCGGTGGCGCCCGCCAGGCGGAGCTCCGCGTCGGCTTCCGCCTCGGCGCGGCAGCTGGGAGCCAGCCTGTGGGAGATCCACGACGTCATGCGGGAGGGGCGCGGCGGCGGGTCGCGGAGGCGCAGGAGCGGGAGGCCGCTCGCCTCCGCCGGCGGCGAGCTGCATCAGAATTCAGGTGGCTTTGGTAGGCATATTGCAGATTCATCAACGAATCATCAGAAGTTAAATCAAGCAAGGAATTGTACAGCACAACCTTTTTCTCCTGGAAGTTACAGAAGCTCAGTTGGGGATTCCAGTATAAATCAAGCGATCAGTCCAGCTCGCTCTTTGGATATCAAGGGTAGATTCAGGGGGGCTGATTATAACCTTAAGACATCAACAGAACTCTTGAAGGTTCTAAATCGAATCTGGAGCCTGGAAGAACAACATACAGCTGATATGTCAGCGATTAATGGACTAAAATTGGAATTACAGCATGCACAGGAACACATTCAAGAACTTAAGTGTGAGAGAAGAGGATATCGCCATGATGTTGCTTCACTGGTGAGGCAACTCTCTGAGGACAAACTTGTCCGGAAAAATAAAGACAAAGAGAAGATTGCAGCAGACATTCATTCCCTGCAAGATGAACTGGAGGATGAGAGACGCCTTAGGAGACATTCTGAAGACCTCCACAGGAAGTTTGGCAAGGAGTTATCTGAGATAAAATCAGCATTTGTCAAGGCAGTTAAGGACCTTGAGAAAGAGAAGAAAACAAAGAACCTGTTAGAGGACCTTTGTGACCAATTCGCAATGGGAATCCGAGACTATGAAGAGGAAGTCAGGGCATTGAAACAAAGGCATGTAAATTACGAATACCAGTTTGATAAATCAGTGCTTCATGTATCAGAAGCATGGCTTGATGAGAGAATGCAAATGCAAAATACTGATGTCAAGGAAGACTCACTGAAGAAATCAACAATTACAGAGAGGCTAAGAAGTGAAATCGAGGCTTTTCTTCTTGCCAAAAGATCGGTTAGCTTTAAGAATAATGACAACTACATGCATGATAGTAGGCCAAATGCTCGGTTACGTCGGCAATCTCTTGAGTCTGTCCATTTTAATGGAGCCACTAGTGCTCCCCAGCTAGCTGAAGATGATGATGATGATTCTGTTGCTAGTGATTTGCGTTGCTTTGAGCTCAACATGCATGGAAGTAGCATTCAGATGCATGACCATACAGGGCCTCGCAGAAGCTACACAGGCAACATGGATGCACCTAAGAGAAGAACAGAATACTCGCATAGTGTAGTTGGTGAGAGTTCACATATGTCTGACGTGCAAATTTATTCAGAGTGTAACAAAGCAAGGTCCAGTAGCAGCAGACCATGGCATGCCACTAGAACTCAAGAAATCGACTCACAGGCCAGCGCTAGAACTGTTCCAGCAGAAGAGCAGAATGAGATCCCTTGCCCCCATATTTCTCAAGGATATCACAATGGCACAACATCGAAGAACAACCTGGGGGCTCATGCCGACTGTCTGGGGCAGGAATCCCTTGATCATTACTCGCGAGCTAGTCTATTTTGTGATGGAACTACTTCGGGGGATTTATGCAATCCACACAGTCCATCGCGACAGCTTGATTATCCGTCCGCATCATTGGGCCATGACATAGGTGAATGCTCAACAGGGCTTCTAGTAGGCATGAAGGAGAACACCCTGAAGGCAAAACTGCTTCAAGCAAGGCTTGAGGGGCGGCATGCCCGGTTGAAGGCGTCAGGAGGTTCGGTAACCAGCAGGAGAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MEQPAAAQPSSSAASGAGAGAAGPVLGKVAGQEGASTSAAAAVAARRGEGDCRGEEEVPLRVRLGRAARRRAGPCTPSPSWKLEGEEVEVAAGELAPVHPAVAPARRSSASASASARQLGASLWEIHDVMREGRGGGSRRRRSGRPLASAGGELHQNSGGFGRHIADSSTNHQKLNQARNCTAQPFSPGSYRSSVGDSSINQAISPARSLDIKGRFRGADYNLKTSTELLKVLNRIWSLEEQHTADMSAINGLKLELQHAQEHIQELKCERRGYRHDVASLVRQLSEDKLVRKNKDKEKIAADIHSLQDELEDERRLRRHSEDLHRKFGKELSEIKSAFVKAVKDLEKEKKTKNLLEDLCDQFAMGIRDYEEEVRALKQRHVNYEYQFDKSVLHVSEAWLDERMQMQNTDVKEDSLKKSTITERLRSEIEAFLLAKRSVSFKNNDNYMHDSRPNARLRRQSLESVHFNGATSAPQLAEDDDDDSVASDLRCFELNMHGSSIQMHDHTGPRRSYTGNMDAPKRRTEYSHSVVGESSHMSDVQIYSECNKARSSSSRPWHATRTQEIDSQASARTVPAEEQNEIPCPHISQGYHNGTTSKNNLGAHADCLGQESLDHYSRASLFCDGTTSGDLCNPHSPSRQLDYPSASLGHDIGECSTGLLVGMKENTLKAKLLQARLEGRHARLKASGGSVTSRRK</aaseq>

Gene Sequence

<dnaseqindica>1..468#1603..1722#2277..3779#ATGGAACAACCCGCTGCTGCCCAGCCATCATCATCAGCAGCGTCGGGAGCAGGAGCAGGAGCAGCGGGCCCGGTTCTTGGCAAGGTCGCGGGGCAGGAGGGTGCCTCCACCTCCGCCGCCGCGGCGGTAGCTGCTCGTCGGGGTGAGGGTGACTGCCGCGGGGAGGAGGAGGTGCCGCTGCGGGTGCGGCTCGGGAGGGCCGCGAGGAGGCGGGCTGGGCCCTGCACGCCGTCGCCGTCGTGGAAGCTGGAGGGGGAGGAGGTGGAGGTGGCGGCGGGGGAACTGGCTCCGGTGCACCCGGCGGTGGCGCCCGCCAGGCGGAGCTCCGCGTCGGCTTCCGCCTCGGCGCGGCAGCTGGGAGCCAGCCTGTGGGAGATCCACGACGTCATGCGGGAGGGGCGCGGCGGCGGGTCGCGGAGGCGCAGGAGCGGGAGGCCGCTCGCCTCCGCCGGCGGCGAGCTGCATCAGGTGAGGGGTTAATTAATAGGTGTCTTCCTTCGAACTAGCCCAAAACCTCCTCCTCATGTGGCAAAAGTAACATCAACTGAATTGTAATTCGTTGGCCCGCAGCAACAAGAGGAAGGAGACTGATTACTGCTAGTAGTAGATGATTTATTTACTTAAACATAGCAAATGGATGCACTAGCACTGATGAAATGTAGCCCAAAACCAAGACATTTGCAGCGCTCGATTTACTGTCTTTCCATGTTTTTGCCTGTTTCCTGGTGTGATGTTCTGCTTTTTGTTTGTTTCGACTGTTTCTTCCATTAGTAGTGGGCATTTTTTTTTGATAGTAGAGCTTGGTCGTCTTCACTAAATTGATTTTATTAATGCCGCTACTGTTCTCAACTCTCAATCCAGCATTTGCTTGCTGGCTAGTATGAACTATGGATCTGTTCTATCTGTTATTCTATCAGTACAATTTGCACTGTCAGTGCTTGAGAGTTGAGTAAAAATTGTTGCTTATTGATTGGACGGGGTTACAAGTTTTTATTAAAAGTAAACACAACCTTTCTTGAAGGTTTCGAACTGCTAACTTTGCAACCAATCTTCTGACTTGTAATGTTGTCTCAGTACTCATCTTTTGTTCTTTGAAGAATACATCAGGGTTTTACACTTTGTTCCTTGGAATTGGAAAAAAGGTGAATCCTTTTGCTTTGCAATGTACTAACTGACCAACATGCTAGTTCTTCAGTTTGCGGAATGTTCCTAGGGAGTGTGTTTGGCATGTCATGGAATGTGAGCTATTTACAACTCGTGTAATCCACATTAGGCATCATTTACGTTAAGCTGCCTTTACATGATGTTAGCTCTGTCTGTGTGCATGTTCTCCTTTCTACAATGTTTGCACACATGTTCTGTATATTAACTTTTGACCTCATATGTGGTGTTGAGATGTAATATTCAAGCATACAGCTGTTAACAATATATCAGACATATTTAAACTTTGAAGAGATTTATCTAGCAAATGCACAAAAGGTGTTTTACCATTTCCCATAGTCTTGATTGCTGAATATAATTATTGCACCATATATAGTAACACGATTATTTTTTTTTGTATTTGTTCTATGCTAAATATTTTTTCGTTACATTCAACCTCAGAATTCAGGTGGCTTTGGTAGGCATATTGCAGATTCATCAACGAATCATCAGAAGTTAAATCAAGCAAGGAATTGTACAGCACAACCTTTTTCTCCTGGAAGTTACAGAAGCTCAGTTGGGGTATGTTTGTATATATTCTTATCTGCTGTGATCCATATTCTTATCTGCTGTGATCCTCTTGGCTGCTTTAATATTTTGGTTTGTGGGCATATAACAAAATCTTATGGCACTATATGGTAATGTGTGTTAGTAGGGGTAAGATTTTCTATCTTGTGATTCTGTTGCGTTTTTCATTACACATGTTTGTGTCTGATGGAGAAGTTTTGGGAGTGTAACAGTATGCTTTATCAAGACAAGTCATTGAGTAGCCTAGCAGTCTAGCTAATGCTTCTCGACTAAAAATAATCATGAATGATTGATAGTAATTAAATAATACATTTGTGCATCGTTTTGTCTGCTCATTCTTTATTTAGATAAACAGAAGTATGAATTTATTTGCTAGGAAAAAGAAAGAACAATGAAGTCAGTCCCATAGTATTTTGCCTGCTGTCTATTGTAGATAACTTGAAACTTCTCTATATTTCTTGATGCAACTAAATATGTTTCCCAGATGTAACAACCAGCACAACAAGCACATTCTCAAAAGAATGTTTCTTTTTTCTTGTATTTTACAGGATTCCAGTATAAATCAAGCGATCAGTCCAGCTCGCTCTTTGGATATCAAGGGTAGATTCAGGGGGGCTGATTATAACCTTAAGACATCAACAGAACTCTTGAAGGTTCTAAATCGAATCTGGAGCCTGGAAGAACAACATACAGCTGATATGTCAGCGATTAATGGACTAAAATTGGAATTACAGCATGCACAGGAACACATTCAAGAACTTAAGTGTGAGAGAAGAGGATATCGCCATGATGTTGCTTCACTGGTGAGGCAACTCTCTGAGGACAAACTTGTCCGGAAAAATAAAGACAAAGAGAAGATTGCAGCAGACATTCATTCCCTGCAAGATGAACTGGAGGATGAGAGACGCCTTAGGAGACATTCTGAAGACCTCCACAGGAAGTTTGGCAAGGAGTTATCTGAGATAAAATCAGCATTTGTCAAGGCAGTTAAGGACCTTGAGAAAGAGAAGAAAACAAAGAACCTGTTAGAGGACCTTTGTGACCAATTCGCAATGGGAATCCGAGACTATGAAGAGGAAGTCAGGGCATTGAAACAAAGGCATGTAAATTACGAATACCAGTTTGATAAATCAGTGCTTCATGTATCAGAAGCATGGCTTGATGAGAGAATGCAAATGCAAAATACTGATGTCAAGGAAGACTCACTGAAGAAATCAACAATTACAGAGAGGCTAAGAAGTGAAATCGAGGCTTTTCTTCTTGCCAAAAGATCGGTTAGCTTTAAGAATAATGACAACTACATGCATGATAGTAGGCCAAATGCTCGGTTACGTCGGCAATCTCTTGAGTCTGTCCATTTTAATGGAGCCACTAGTGCTCCCCAGCTAGCTGAAGATGATGATGATGATTCTGTTGCTAGTGATTTGCGTTGCTTTGAGCTCAACATGCATGGAAGTAGCATTCAGATGCATGACCATACAGGGCCTCGCAGAAGCTACACAGGCAACATGGATGCACCTAAGAGAAGAACAGAATACTCGCATAGTGTAGTTGGTGAGAGTTCACATATGTCTGACGTGCAAATTTATTCAGAGTGTAACAAAGCAAGGTCCAGTAGCAGCAGACCATGGCATGCCACTAGAACTCAAGAAATCGACTCACAGGCCAGCGCTAGAACTGTTCCAGCAGAAGAGCAGAATGAGATCCCTTGCCCCCATATTTCTCAAGGATATCACAATGGCACAACATCGAAGAACAACCTGGGGGCTCATGCCGACTGTCTGGGGCAGGAATCCCTTGATCATTACTCGCGAGCTAGTCTATTTTGTGATGGAACTACTTCGGGGGATTTATGCAATCCACACAGTCCATCGCGACAGCTTGATTATCCGTCCGCATCATTGGGCCATGACATAGGTGAATGCTCAACAGGGCTTCTAGTAGGCATGAAGGAGAACACCCTGAAGGCAAAACTGCTTCAAGCAAGGCTTGAGGGGCGGCATGCCCGGTTGAAGGCGTCAGGAGGTTCGGTAACCAGCAGGAGAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007918