BGIOSGA007950

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Revision as of 03:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007950| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007950, complete gene.| tag = OsI_067...")
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Gene Name

BGIOSGA007950

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007950, complete gene.

LocusTag

OsI_06712

Ensembl Transcript ID

BGIOSGA007950-TA

Ensembl Protein ID

BGIOSGA007950-PA

Length

6338

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10714836..10721173

Sequence Coding Region

10714836..10715474,10716413..10716525,10717963..10718014,10718464..10718576,10720930..10721173

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10714836..10721173 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10714836..10721173 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGTTGGTGGTCGGGAGGGCGCGTGGCGGGTGGGGATTCGGGCACGAGCGGGTCGGCGGTGGGTCGCCGGATGACGCCCGGTGGGACGCGAGGAAGAAGGAGAGAGCGGCGGAGGAGGGCGTGAGGTCGCCGGACCTGAGGAAGAAGGAGGGGTGGGACTTTGGGCAGCGTCGCGTCGGCGGCGGGTCGCCGGACGATGACAGGTGGGACCTCCGGAAGAGGACCCGAGGTTCGCCGGACGATGCCCGGTGGGACCTCCAGAAGAAGAGGAGGGAGGAAGAGGAGAGGAATGGCGGTGGGTCGCCGGAGCCGGAGCTGGGGAAGAAGAATGATGAGGAGGAGAAGAAGAAGGTGGTGGTGGTGGCGAGGGGGGAAGAAGTAGAAGAAGAGGAGGTGAAGAGGGGGAAGAAGTGGTGCGCCGGCATGCGCGTGCCGTGGGTGGAGGAGGGGCCGCACATGCTGTACGCGGGACCCAGTTTCCTCGCCGGCGCTGCACCGGATCCCAGCTCTCTCCCCATCCCCTCCTTCGGTCCTCCCAGAAGGAGGACGAGCAGCAGTGGCGGTGGTGTGGCCGTGCGCGTCGCGCTGATATTCTTGGCGGGCCTCGTGCTACGGTTACGTCAGTTGGAACGTCCTAGTTGCCACGCAGACGAAATGATGGGGAATGTAGATATTTTTCCTGATGCTGCTGCTCAGGGATCAATTGAAACCTTTAGTTTTAACGATGAACCTCCTAGTGCGGAAAGGTGTCTGTCTTCCGCGAGCTTCCGCTTCCCGCTTCTCTGCGCGCCCAGAGAGCCTAGTTGCCACGCAGACGAAATGATGGGGAATGTAGATATTTTTCCTGATGCTGCTGCTCAGGGATCAATTGAAACCTTTAGTTTTAACGATGAACCTCCTAGTGCGGAAAGGTACTGGCTATCTGTCGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTCTATTCTATTGTCATTGAAAGTCCATCCTTGCCAGTACCAGCAGGCTGCAAGGTGATCACATCATCGATACCGATAAGATCTCCACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCGCTCACCAAGTGGAAGGCGAAGAAAATGATGGATTTACCGGCATATGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAALVVGRARGGWGFGHERVGGGSPDDARWDARKKERAAEEGVRSPDLRKKEGWDFGQRRVGGGSPDDDRWDLRKRTRGSPDDARWDLQKKRREEEERNGGGSPEPELGKKNDEEEKKKVVVVARGEEVEEEEVKRGKKWCAGMRVPWVEEGPHMLYAGPSFLAGAAPDPSSLPIPSFGPPRRRTSSSGGGVAVRVALIFLAGLVLRLRQLERPSCHADEMMGNVDIFPDAAAQGSIETFSFNDEPPSAERCLSSASFRFPLLCAPREPSCHADEMMGNVDIFPDAAAQGSIETFSFNDEPPSAERYWLSVGPGDFQLSSAGCANSALYSIVIESPSLPVPAGCKVITSSIPIRSPQFAVMKSVNYLPNALTKWKAKKMMDLPAYG</aaseq>

Gene Sequence

<dnaseqindica>1..639#1578..1690#3128..3179#3629..3741#6095..6338#ATGGCGGCGTTGGTGGTCGGGAGGGCGCGTGGCGGGTGGGGATTCGGGCACGAGCGGGTCGGCGGTGGGTCGCCGGATGACGCCCGGTGGGACGCGAGGAAGAAGGAGAGAGCGGCGGAGGAGGGCGTGAGGTCGCCGGACCTGAGGAAGAAGGAGGGGTGGGACTTTGGGCAGCGTCGCGTCGGCGGCGGGTCGCCGGACGATGACAGGTGGGACCTCCGGAAGAGGACCCGAGGTTCGCCGGACGATGCCCGGTGGGACCTCCAGAAGAAGAGGAGGGAGGAAGAGGAGAGGAATGGCGGTGGGTCGCCGGAGCCGGAGCTGGGGAAGAAGAATGATGAGGAGGAGAAGAAGAAGGTGGTGGTGGTGGCGAGGGGGGAAGAAGTAGAAGAAGAGGAGGTGAAGAGGGGGAAGAAGTGGTGCGCCGGCATGCGCGTGCCGTGGGTGGAGGAGGGGCCGCACATGCTGTACGCGGGACCCAGTTTCCTCGCCGGCGCTGCACCGGATCCCAGCTCTCTCCCCATCCCCTCCTTCGGTCCTCCCAGAAGGAGGACGAGCAGCAGTGGCGGTGGTGTGGCCGTGCGCGTCGCGCTGATATTCTTGGCGGGCCTCGTGCTACGGTTACGTCAGTTGGAACGTGTACGAGTTAGTAGGCTAGCGTTGCTGTGCCTTAGCCAGTAGTAGCAGCAGCAGCTAAATAAATAATAATAATAATAATAATAATAATAATAAATAAATAAATAAATAAATAAATAAAAATAAAAAATAAAATAAATAAAAAATAAAAATTTTTGTTCTTCCTTGTCTTTTTATAGTTTAACGAGAGCTGAGACAGGGAAAAAAACACTTGTATTATGATCCATCCATTCCTGCAGTTTTGCCGCGTGTCCTGATGCCCCGGCCTTCACGTGGAGCACAGCCGTTGGCCGGGCTCACTCCATCTCCATGGTGCGGGTGGGGGAGGGTGCCGCCGCAAGCTCCAATCGGATCGGTCAGTATATTGTTACATCCACTCTCTTCCTCGTTGGGTTCTGGTCAAATTCGGAACTTGGGTTCCCATGCTGATCACCTTATCGGTTTCCTTCGCCTGCCGTCTCCTACCTTTGGTTGGTTCGAGCTGAAAAGATTTTTCAGTTTTTCTTTTCTGAACTCTTGACTCCCTGAGGTCATTTATTCTATCAGTTCTCAGTCCAAAGGTTGCACGCTTGCACTTGACGTGTAGTTTTAGAATGACGAAGAAATGGATATTATATTTAAATATAAGTGCCATGAATTCTTGTTTAGCCGCGTATTGAAGTTTTGCATCAATTCTGAAGTGTCCCACCTCCAGCGATTACTTTCAGGATGATAAGAAATGGATATTAGTGCTATGAATTCTTGTTTAGCCGTGTATTGAAGTTTTGCATCACTTCTGAAGTGTCCCACTCCCAGCGATCAATTAGTTTCAGGAATGAATGGAAGAAGTGGATATTAGTGTCATTACTTCTTCTTTAACCGCGTATTGAAGTTATGCATCAATTCTGAAATGTCCCACTCCCAGTGATCGATCTGAAGTTTTTCCTTCTTTCGTTGTTCAGCCTAGTTGCCACGCAGACGAAATGATGGGGAATGTAGATATTTTTCCTGATGCTGCTGCTCAGGGATCAATTGAAACCTTTAGTTTTAACGATGAACCTCCTAGTGCGGAAAGGTATTGTTCTATGTGCTCGTGTTGATAAACTTCCATGGCTGTTTGTTGTAGTGATTGAATCTGATGATGATCCTTAGTGACGGGCTGTTTCAATGTGAGGCCGGTTTCTTTAGTAAAAAAAAAACTGCAATTTGTAGTTCACAAGATTGTAATATTTTGTCATGTCTCCCTGTTTAGTTGGAGAACCAAAGCATGCAAAGCTTACTAAACATTACCTTTTGATCTGGTGTTGCACTGAATTAACTTGGTGCTATCCACTGTGGAACATTATTTAGCATTCCACATTATTTCGCTAATTTCTTTTCAAAAAAACATTATTTGGCTAATTCTGATGCTAAATCCTGGAGAAAACTTGGAAGTGATAGAAAACAATCCTTTAGGCAGTGTTGCCTCCAGTGGATTGTAGAGAATGATAAATTGCTTTATATGAATTAAGTACTAGTAAAAGATCACCACTGAAGAAAAGCTAGCTAATTAACTTGCAATATCCTCAATATATCCTTAATATGGATATGTGTTAAAATATAGAAGGTGCAGTGCTTACCTATATTGATAAGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGTACTTTTTCCTTTCCTTCCCTTACTCGCAGGCCACAGCCGCTGGCCCAGTCCGCCTCCTTCCCGCGGCCCACTCGCGCTCATCTCCGCTCCACGATCCCCTTCCTGCTGGGCCCACCCGTCAGCGACCTTATCCTGGCGCGGGCCCACCTGTCAGCTCCATCGTCTTCTTCCTTCCTCTTCCTCTTCCTCTTCCTCTTTCCTCTCACTCTCTCTTCCTCATCTCTCGAATCCTCTTCCTCCCACTCTCTCTCGCGCCCTTCTTCGGCGAGGCGCCGTACCCGCGCGTTCGTCGATCCATCACTTCGCCATCCCGTCCGCCTGAGCTGCCTTCGCCTAGTTCCAGTTCCGCCGCCGCCTCACCGTATTAGCACCACCTCGACGGTGGTCCGTGCCTGGTCGATCGGAGGCGTACATCAGTATAAAAGGTGGATTCTGTTTCGTTGTGGCCGCCGTTCCAGGCTCATGAAGGTAGGGAGGCGGCAGATGGCGAGGAAGACGGCGCCGGAGACAGAGAGGAGAGGAGTTCGCCGCCGGTCGAGGCTTCTCCTTCCTGACATCAGCCGTCGCCCGCGCCGGCGCGGCGCCAAGCCCTTTCTCCTCCTTCTCTGGTCGCTCGGGGGCCATATGTGTCGCTCCGTCTCCACGCCGCGCCCGTGCTCTCGGCACCTCCGACGACATCCGCCGCCGGCGAATGTAGTATTTGATTAGTACCGCCTCGCCGGTTTATGAACGCAGTTATGAATTTAAAAGGTGGATCAGCTCACACAAGTTCTCCTCGGATATTATAACGTGTTTGCTTTGTCTGTTGTGCAGGTTTGCAGGTGTCTGTCTTCCGCGAGCTTCCGCTTCCCGCTTCTCTGCGCGCCCAGAGAGGTAAGTGTGTGTGTGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTTGCACGCTGCACTTGACGTGTAGTTTTAGAATGACGAAGAAATGGATATTATATTTAAATATAAGTGCCATGAATTCTTGTTTAGCCGCGTATTGAAGTTTTGCATCAATTCTGAAGTGTCCCACCTCCAGCGATGACTTTCAGGATGATAAGAAATGGATATTAGTGCTATGAATTCTTGTTTAGCCGTGTATTGAAGTTTTGCATCAATTCTGAAGTGTCCCACTCCCAGCGATTAATTAGTTTCAGGATGATGGAGAAGTGGATATTAGTGTCATTAATTCTTCTTTAGCCGCGTATTGAAGTTATGCATCAATTCTGAAATGTCCCACTCCCAGTGATCGATCTGAAGTTTTTCCTTCTTTCGTTGTTCAGCCTAGTTGCCACGCAGACGAAATGATGGGGAATGTAGATATTTTTCCTGATGCTGCTGCTCAGGGATCAATTGAAACCTTTAGTTTTAACGATGAACCTCCTAGTGCGGAAAGGTATTGTTCTATGTGCTCGTGTTGATAAACTTCCATGGCTGTTTGTTGTAGTGATTGAATCTGATGATGATCCTTAGTGACGGGCTGTTTCAATGTGAGGCCGGTTTCTTTAGTAAAAAAAAAACTGCAATTTGTAGTTCACAAGATTGTAATATTTTGTCATGTCTCCCTGTTTAGTTGGAGAACCAAAGCATGCAAAGCTTACTAAACATTACCTTTTGATCTGGTGTTGCACTGAATTAACTTGGTGCTATCCACTGTGGAACATTATTTAGCATTCCACATTATTTCGCTAATTTCTTTTCAAAAAAACATTATTTGGCTAATTCTGATGCTAAATCCTGGAGAAAACTTGGAAGTGATAGAAAACAATCCTTTAGGCAGTGTTGCCTCCAGTGGATTGTAGAGAATGATAAATTGCTTTATATGAATTAAGTACTAGTAAAAGATCACCACTGAAGAAAAGCTAGCTAATTAACTTACAATATCCTCAATATATCCTTGATTTGGATATGTGTTAAAATATAGAAGGTTACATATATTAATAAGTGATTAGCATTCTTCACTAGGGCAGCTAGAAAAAAAAAACCTATTGATTTGATGTAGCTATTCTTTGAGTTTGATAGAACACATCCATGTAGATAGAGCTACTGTAGGTAAATAAGGGCAAAAATCATGGATTTGGGATCATCTGAATATAAGAGTTCCAATCCTCATCTATTTCAATAATTGATTTTCAGAAATGTAACTCCAGTGTCCAAACTAAAGCAGCAATATCAGGGTGTATGCTCTGGGCTAGGCTTTTGTTAAGTGAGGTTTTTGGGCAGGGCTTTTGTTAAGCAATGTTTTTAAGCTCATGTCACTTATCAAAGCTTTCTTTTAACTGCAAGATCATTTATCAGGCTTCTATTCGTTTGGGAGTAATAGAAAACAATCCTTTTGGGAGTCTTGGCAAGTGGATTGTAGGGAATGATAAATGGCTTTATATAAAATTAGTACTAGTAAAAGATTACCACTGAAGAAATAGTAGAAAACTCAGTTGCAAGTTCTGCTGTCATGTATCGTGACATCGTACCACTGCAAGTACTGTTCTTCTGTATCTTCTCCAATGGGTTTACAAAGCTATGAGTTACTCAAGAGATCTATGTTAACGGGTGTATCTATTATCAGGGTTTGTTGGATTTTGATCCTGAGAGCGTTTTTGTTGTAAACTGAGTCCCTGATCCCATGCCTTCTTGGACTTTATAGAAACATCTCCATCTATGTCCTTCTGGAATATGCAATCCAGTGGAACTAATGCAACTACAATAGAAATGTTCACCACTATGCCCTGCAATTAACTTACAATATCCTCAATATGCTCTTGATTTGGATATGTGATAAAATACAGAAGGCTCAGTGCTTACCTGTACTGGTAAGTGATTGACATTCTTCACTGGGGCATCTAGAAAAAAAAAGGAAAACGTAAGCTATTGTTTGACTCTAACTGCTTGATATGACTTCGATAGAAAAAAAGGAACTTTTTACGAATAGAGAGCAGCTGTAGATTAACAAGGAAACGACTTAGAGAGATATTTGTGATCAAAATTCATGGATTCGGGATCATCTGAATACAAGAGTTCCAATCCTCATCTATTTCAATTATTGATTATCAGAAATGTAACTCCACAATCCAAACTAAACCGATATCAGGGTGTAAGGGCTGGGCTGGGCTTTTGTTAAGTGAGATTTTTAAACTCATAGCTTTCTTTTTAACTGCAAGACCATTTATCAGGCTTCTATTAGTTATCCGCTTTAGGAACTTTTGAAACCTTTTTCATCCTTGCTGCTCGATTCCTGCAAAAGAGTTATATACTGCTTTGTTTTGGAGTACTTGTACCGCTGATTCTATAGGTTGTGAAACAAAATACTGTTATTCCTTCATATTTAAATGCTAATTTTGGTAAATTCTATTTATGCAGCACTTTGTTCTACCCTTACAAGTTTGATAATCCTATGGGGAATATGCAGGGTTTTTTTTTCCATCAATTATGAAAATAGAAGAAGAACAGATACCTGACTATCTATAACAAATTTGTAATTTTTTTCTTAGTGTGTGCAAACTTGTAAGTGAACAAGAAGATATCATTCTGTTTACTTGCTTTCCATGAAATCCTGATTCAGACACCATTGTCATCGGTATTAACTTTTGCACATTACTGGCAGGCAGCTCTATGAGTTATAGCAGCATCTTGACCGCTTCCTGAAATCTGCATTGATGGCTAAAATCAAATTACCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAAGGATCACTCAGGTACTGGCTATCTGTCGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTCTATTCTATTGTCATTGAAAGTCCATCCTTGCCAGTACCAGCAGGCTGCAAGGTGATCACATCATCGATACCGATAAGATCTCCACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCGCTCACCAAGTGGAAGGCGAAGAAAATGATGGATTTACCGGCATATGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007950