Os12g0576700

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0576700| Description = Similar to Diphosphonucleotide phosphatase 1 precursor| Version = NM_001073642.1 GI:115489245 GeneID:4352613| Length...")
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Gene Name

Os12g0576700

Description

Similar to Diphosphonucleotide phosphatase 1 precursor

Version

NM_001073642.1 GI:115489245 GeneID:4352613

Length

3746 bp

Definition

Oryza sativa Japonica Group Os12g0576700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24014326..24018071

Sequence Coding Region

24014459..24014770,24015005..24015314,24015403..24015528,24015603..24015808,24015913..24016045
,24016126..24016207,24016649..24016778,24016937..24017029,24017155..24017277
,24017399..24017465,24017554..24017645,24017748..24017909

Expression

GEO Profiles:Os12g0576700

Genome Context

<gbrowseImage1> name=NC_008405:24014326..24018071 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24014326..24018071 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaggctgtgggtggtggtcacatggctggttctttgggccgcagctgcggtgcaccccggggagcagccgctgtcgaggattgccgtcgagaggatggtccttgccgtcaacgagtcggcacatgtcagggcgtcccctttggttcttgggctgaagggtgagaccaatgaatgggtagaggtagagttcttcaatccaaacccctccaatactgactgggttggagtgttttctcctgctgattttagttctgcaatctgtgaggcttatggtgttccacagtattacccaatgctctgcacagcacctatcaagtaccaatatgcaaacttcaataataatggttatagtaagtctgggaagggcaaactgaagcttcagttgatcaaccagagggaggatttctcatttgctcttttttctggtggcctcgagaatccaaagctggttgctgtctcaaacaagatcgcatttgcgaatccgaaggcgcctgtttacccacgtttagctcaagggaagtcttggaatgaaatgacagtaacttggacaagtgggtacgattttaaagaagcagttcctttcgtcgaatggggcgcgaaagggggacaacgggtcctttctccagctggaacattaacatttgacagaaatagcatgtgtggtgcaccggcacgaactgtcggttggcgccatcctggttacattcatacaagctacttgaaagaactgtggccagattcactgtatacttacagacttggccataggttaccaaatggtactcacatctggagtaagtcatacagcttcaaagcatcaccttatcctgggcaagattccgttcagagagtagtcatatttggagacatgggaaaggcagaggcagacggttcaaatgagttcaatgacttccagccaggatcattgaacactacttaccagatcatcagagacctgaaaaacattgacatggttgtccatattggggatatttgctatgcaaatggttacttgtcgcagtgggatcagttcactgcgcagatcgagccaattgcttcgactgttccatacatgattggcatgggtaatcatgagagggattggcctggaactggttcattctatggaaaccttgactctggaggagaatgtggtgttcctgctcaaactgtattctacactcctgctgagaaccgtgcaaaattatggtatgcgacagactatggcatgttcaggttctgcattgctaatacagaagaggactggaggccagggactgagcagtacaagttcatcgagcaatgcctatcgtccgtcgacaggcagaagcagccatggctcatattccttgcgcaccgagttctcgggtactcatcctgcaccttttatgaagaagagggtacatttgaggaaccgatgggccgagaatcactacaggagctttggcagaagtacaaggttgacctcgccttctatggccatgtccacaactatgaaagaacatgcccagtctatcagaataaatgtgttgttagtggttcagatcattacagtggtcctttcaccgcgacaacacatgtggtcgttggaggtgctggtgctggtacctccgactcagaattcaccacttcaaatatcaaatggagttactacagggactttgactacggttttgtcaagctcacagctttaaatcattcatccttattgtttgagtacaagaaaagcagtgacggcaatgtgtatgatcatttcacaatctcacgtgattaccgagacatcctggcttgttcaattgacaactgtcctcggaccacactggctacctaa</cdnaseq>

Protein Sequence

<aaseq>MIRLWVVVTWLVLWAAAAVHPGEQPLSRIAVERMVLAVNESAHV RASPLVLGLKGETNEWVEVEFFNPNPSNTDWVGVFSPADFSSAICEAYGVPQYYPMLC TAPIKYQYANFNNNGYSKSGKGKLKLQLINQREDFSFALFSGGLENPKLVAVSNKIAF ANPKAPVYPRLAQGKSWNEMTVTWTSGYDFKEAVPFVEWGAKGGQRVLSPAGTLTFDR NSMCGAPARTVGWRHPGYIHTSYLKELWPDSLYTYRLGHRLPNGTHIWSKSYSFKASP YPGQDSVQRVVIFGDMGKAEADGSNEFNDFQPGSLNTTYQIIRDLKNIDMVVHIGDIC YANGYLSQWDQFTAQIEPIASTVPYMIGMGNHERDWPGTGSFYGNLDSGGECGVPAQT VFYTPAENRAKLWYATDYGMFRFCIANTEEDWRPGTEQYKFIEQCLSSVDRQKQPWLI FLAHRVLGYSSCTFYEEEGTFEEPMGRESLQELWQKYKVDLAFYGHVHNYERTCPVYQ NKCVVSGSDHYSGPFTATTHVVVGGAGAGTSDSEFTTSNIKWSYYRDFDYGFVKLTAL NHSSLLFEYKKSSDGNVYDHFTISRDYRDILACSIDNCPRTTLAT</aaseq>

Gene Sequence

<dnaseqindica>3302..3613#2758..3067#2544..2669#2264..2469#2027..2159#1865..1946#1294..1423#1043..1135#795..917#607..673#427..518#163..324#aaggagttcttgaagttgctaccttttacttggtgccttgctctctctttcttggagattgctgccgtctataaggaatttcagataggaggtggattccaggctaagttcatcactgactctggctgggtaatttttttttcaggtctctgaaggaggagtatgatcaggctgtgggtggtggtcacatggctggttctttgggccgcagctgcggtgcaccccggggagcagccgctgtcgaggattgccgtcgagaggatggtccttgccgtcaacgagtcggcacatgtcagggcgtcccctttggttcttgggctgaaggtcagctccatttctcacctactgccatgagaatctgcagttcttcagagttcagacacagtaatcgtttgctgagttggttgtgaatttctgatgctacagggtgagaccaatgaatgggtagaggtagagttcttcaatccaaacccctccaatactgactgggttggagtgttttctcctgctgattttaggtaacatgaactgaaattttcaggtgaagctgaaatttagcacaagttttgataattcttttttgtttcttgtgttggatattgtcagttctgcaatctgtgaggcttatggtgttccacagtattacccaatgctctgcacagcacctatcaaggttgccaagttttttcctgttccagttaattaagattcagatatacattttcttaaaaaaaaatcagatatagctccttgccatgattttgactttttttttggtcttcaattaatcgcagtaccaatatgcaaacttcaataataatggttatagtaagtctgggaagggcaaactgaagcttcagttgatcaaccagagggaggatttctcatttgctcttttttctggtggcctcgagaatgtaagaccaaaagaaaaaaaaagattcttctgaacttctctttctatatttattttttggaaggaaaaaacatacatttttcttttcatattctcatgactgaagataattcactcctttaatagccaaagctggttgctgtctcaaacaagatcgcatttgcgaatccgaaggcgcctgtttacccacgtttagctcaagggaagtcttggaatgaagtaagtttcccaaccaatctggaattaacatgaatgttcaagttattcagctagtcttttctaagtggaccaatggagcaagagtgtagctttcatcatacaagattgatgtctaaaaaaaattcaaaaaaaaggtgactgaattagtactgtggtagatgacagtaacttggacaagtgggtacgattttaaagaagcagttcctttcgtcgaatggggcgcgaaagggggacaacgggtcctttctccagctggaacattaacatttgacagaaatagcatgtgtggtatgtcactatatcctgttgaacatcagatagctaaagttcggtcttctctcaaaaagtaatactccctccgtttcagattataagtcattttgactttggtcaaagtcaaactgctttaagtttgaccaagtttgtaggaaaaaaataataacattttcaacccaggataaatttattaagagaatgtatttaattattgattgaaactaatttggtattataaatattactatatttatctataaacatagttaaatttgaaggagtttgactttgaccaaagttaaaacgacttataatctgaaatggagggagtagtttagaatttataatgccatcataacttaatatagtagtgtggtacgggtaacactgcatttctgttctctgaatgtcatatcaaccacttcatttcaacgattcaatctactaatgtaggtgcaccggcacgaactgtcggttggcgccatcctggttacattcatacaagctacttgaaagaactgtggccagattcactgtatgtgatctatcttgccgcctcctgaatttcgacacatccagaaattaagcagtatggtttactttgcaacatttcaggtatacttacagacttggccataggttaccaaatggtactcacatctggagtaagtcatacagcttcaaagcatcaccttatcctgggcaagattccgttcagagagtagtcatatttggagacatgggaaaggtagatattgtactatttgtatctggtgttcattaactgttgagcatggtgttctgaaaaaaaacacagtgatagtgatattctttcctgatatatttcctcaggcagaggcagacggttcaaatgagttcaatgacttccagccaggatcattgaacactacttaccagatcatcagagacctgaaaaacattgacatggttgtccatattggggatatttgctatgcaaatggttacttgtcgcagtgggatcagttcactgcgcagatcgagccaattgcttcgactgttccatacatgattggcatgtcagtatctcatttcattgcttgtgttcttccaattgttcttgtctaacaattgtaaatgggcacttctgcaggggtaatcatgagagggattggcctggaactggttcattctatggaaaccttgactctggaggagaatgtggtgttcctgctcaaactgtattctacactcctgctgagaaccgtgcaaaattatggtaattctatggctcagtgtggctacatcagttgttacaacttttgccatttctgaattttactaaaacaacttttatccttcttcaggtatgcgacagactatggcatgttcaggttctgcattgctaatacagaagaggactggaggccagggactgagcagtacaagttcatcgagcaatgcctatcgtccgtcgacaggcagaagcagccatggctcatattccttgcgcaccgagttctcgggtactcatcctgcaccttttatgaagaagagggtacatttgaggaaccgatgggccgagaatcactacaggagctttggcagaagtacaaggttgacctcgccttctatggccatgtccacaactatgaaagaacatgcccagtctatcaggtgtgtatctaattaccatttgcttcaactcaaattgcagttttgcagattgaaaagtttttattcactgtatgcacaagtttgtaggacagtaccttataatatattttgttacaaaaaacctaactgataggtagtattgtcggtaatgctacagtcaacatatagttagcacactcgacaattgcatgttacaaaattactgtactgactacaatctttgattgatttcagaataaatgtgttgttagtggttcagatcattacagtggtcctttcaccgcgacaacacatgtggtcgttggaggtgctggtgctggtacctccgactcagaattcaccacttcaaatatcaaatggagttactacagggactttgactacggttttgtcaagctcacagctttaaatcattcatccttattgtttgagtacaagaaaagcagtgacggcaatgtgtatgatcatttcacaatctcacgtgattaccgagacatcctggcttgttcaattgacaactgtcctcggaccacactggctacctaaagcatgaacagttctagacaggtttacaggtagattgattgacagggcctcaaagagcaatctagttcctgtacaaagtcttttgggactattccaataaatcataataaacacggaattttcttgactgcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0576700, RefSeq:Os12g0576700