BGIOSGA008008

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Revision as of 03:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008008, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008008, complete gene.

LocusTag

OSJNBA0073G17.1

Ensembl Transcript ID

BGIOSGA008008-TA

Ensembl Protein ID

BGIOSGA008008-PA

Length

4748

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11990569..11995316

Sequence Coding Region

11990569..11991240,11992619..11992720,11993627..11994256,11995056..11995316

Genome Context

<gbrowseImage1> name=IndicaChromosome02:11990569..11995316 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:11990569..11995316 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGACCTTTGCCTTCCCAGGGGAAAGAAGTTATGGTTGGCTCTAAAGGTGTTATTAAGAGGGATGAATTTGTGAGGATAATCACAAAGGCTCTGTATAGCCTTGGTTATGAAAAAAGCGGAGCAGTTCTTGAGGAAGAATCAGGAATAACTCTGCATTCCCCAACAGTGAATCTTTTCAGAAGGCAGGTACTTGATGGGAATTGGGATAGTGCAGTGGTTACCTTGAAGAAGGTTGGCCTTTTGGACGAAAACATTGTAAAGTCTGCTATATTTCTGATACTGGAACAAAAATTTCTTGAACTTTTGAGAAATGACAATGTCATGGGTGCTATAAGGACTTTGCAGAGTGAAATTACACCACTTGGTGTCAACAAAAAAAGAGTTCATGAACTGTCAGGCTGCATAATTTCTTCTCCACAGCATGTATTACTTGGTTTTTCGAAGCTTGGCATTGAATCTTCAAACTCACGGCTGAAGCTGCTAGAGGAATTGCAAAAGGTGCTTCCCCCAACTGTTATGGTACCAGAGAGGAGGTTAGAGAATTTGCTTGAGCAAGCACTTACTGTCCAGCGTGAAGCTTGTTATTTCCATAATTCTATTGATGGCTTGTCACTCTACACTGATCATCACTGTGGGAAGGATCAGCTACCATCTTGCACGGTGCAGGTTCTGCGTGCACACCGTGATGAAGTATGGTTTCTTCAATTTTCAAACAATGGAAAGTATTTAGCCTCAGCATCAAATGATAAATCCGCAATCATATGGAAGGTTGATGAAGATGGAGAGCTATTGCTAAAGCACACATTGACTGGTCATGACAAGCCAGTCATGATGGTTGCATGGAGCCCTGATGATTGCCAGCTTCTCACATGTGGAATGGAAGAAGTCATTCGGCGTTGGGATGTTGAATCTGGCAAATGTCTTCATGTTTATGAAAAGTCTGGCATTGGTCTGATCTCATGTGGTTGGTTTCCAGATGGAAAGCATATATTGTCTGGTCTAACTGATCATAACTTTTGCTTGTGGGATTTGGATGGTAAAGAAGTAGATTGTTGGAAAGGCCAGAGATCATCTAAAACATCTGATTTTGCCGTATCAAACGATGGCAAGCTTATAATAAGCATGAATAGAGAGTCCACCATTCGTTTATTTGATCGGGAGACAAAACAGGAGAGATTGATTGAGGAGGACAACACAATCACATCATTTTCTCTTTCAGAAGATGGTGATTTCTTGCTTGTAAACCTTATAAGTGAGGCGATTCATTTGTGGAACATAAGGAATTGCCCCATTCGAGTTAACCGGTATGCTGGTCATAAGCGCAGCCGGTTTGTGATAAGGTCTTGTTTTGGTGGATCCGAGCAGGCCTTTATTGCTAGTGGTAGTGAAGATTCACAGATCTATATATGGCATAGAGCTACTGGAGATCTTATTGAAACTCTGCCTGGTCACACCGGCACGGTCAACTGTGTGAGCTGGAATCCTGCGAATCCGCACATGCTTGCATCTGCAAGTGATGATCACACAATTCGTATATGGGGTTTAAAGAAGGCCAATCTGAAGCGCAAGGATGTTGGCAGCAGCAATGGGATCTATGCAAATGGTAATACACCCAGCAATGGTGTGGTACACCAGTGCAACGGGAACAGCAGCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MARPLPSQGKEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVLDGNWDSAVVTLKKVGLLDENIVKSAIFLILEQKFLELLRNDNVMGAIRTLQSEITPLGVNKKRVHELSGCIISSPQHVLLGFSKLGIESSNSRLKLLEELQKVLPPTVMVPERRLENLLEQALTVQREACYFHNSIDGLSLYTDHHCGKDQLPSCTVQVLRAHRDEVWFLQFSNNGKYLASASNDKSAIIWKVDEDGELLLKHTLTGHDKPVMMVAWSPDDCQLLTCGMEEVIRRWDVESGKCLHVYEKSGIGLISCGWFPDGKHILSGLTDHNFCLWDLDGKEVDCWKGQRSSKTSDFAVSNDGKLIISMNRESTIRLFDRETKQERLIEEDNTITSFSLSEDGDFLLVNLISEAIHLWNIRNCPIRVNRYAGHKRSRFVIRSCFGGSEQAFIASGSEDSQIYIWHRATGDLIETLPGHTGTVNCVSWNPANPHMLASASDDHTIRIWGLKKANLKRKDVGSSNGIYANGNTPSNGVVHQCNGNSSK</aaseq>

Gene Sequence

<dnaseqindica>1..672#2051..2152#3059..3688#4488..4748#ATGGCTAGACCTTTGCCTTCCCAGGGGAAAGAAGTTATGGTTGGCTCTAAAGGTGTTATTAAGAGGGATGAATTTGTGAGGATAATCACAAAGGCTCTGTATAGCCTTGGTTATGAAAAAAGCGGAGCAGTTCTTGAGGAAGAATCAGGAATAACTCTGCATTCCCCAACAGTGAATCTTTTCAGAAGGCAGGTACTTGATGGGAATTGGGATAGTGCAGTGGTTACCTTGAAGAAGGTTGGCCTTTTGGACGAAAACATTGTAAAGTCTGCTATATTTCTGATACTGGAACAAAAATTTCTTGAACTTTTGAGAAATGACAATGTCATGGGTGCTATAAGGACTTTGCAGAGTGAAATTACACCACTTGGTGTCAACAAAAAAAGAGTTCATGAACTGTCAGGCTGCATAATTTCTTCTCCACAGCATGTATTACTTGGTTTTTCGAAGCTTGGCATTGAATCTTCAAACTCACGGCTGAAGCTGCTAGAGGAATTGCAAAAGGTGCTTCCCCCAACTGTTATGGTACCAGAGAGGAGGTTAGAGAATTTGCTTGAGCAAGCACTTACTGTCCAGCGTGAAGCTTGTTATTTCCATAATTCTATTGATGGCTTGTCACTCTACACTGATCATCACTGTGGGAAGGATCAGCTACCATCTTGCACGGTGCAGGTAATAACTTATATAAGTGCTTATTTCAGTTTATAGTGTTATGAATGAAGGTTGTATACTTGTCTTGACTGCTTATACACCCACATAAGAATGATTTCTTGGCCTACTGCTCTGTTGTTCTGTTCAACCACTTAAAATATTTTCTTGATCCACCACTGGGCAATTTTATTTAAAACATTCCTCAAATACTGCCTTTGGCCACCATGAAGTAATTCTCAGAAGGTTGTTACTATAATGTTGTTACCAGACTAGAGAGGAGATTTTTGTTAAAAGCAGTCCAATAGCTTATTACTGAATCTTGTTACGAAAGGTCCTACAATAGATTTATTATAGCATGAATATGTTGTGTATCACTTCTAATGGCTCTGCAATACGCTTTATATAGTAATGAGCTTCTCTGTAGTCCAACTGGTTAATGCTATCTTGGGCCCTAGCGCTAACTTGTTACTGATGCAAGTGTCAAAGTTCTCTCCCTTCCCTCCCCTCCTACTAAACAAGTAAACTGCACTATTGTGAGTGCTCAAGTGCTCTGTGTTTTTGGATAGTAAAACAGAAGTTACAGAACAGTTTACATGGAAGCAGGAAAACTTCAACTTTAAAAAGTTCAGCCTGCAGTTGTAGTAGGCATGGACCAAGTTTTTCTTGCATATTCCTGAAATATATATATTTACTATTTAGATAAAGTAACATAGTTTGATGCAAAATTCAGATTTGGATCAAGAAAAGATTTGGCTTAAAATTTTTATATCAGATAGAGCAAATAAGAAATATGTGCTACTCATCTTCTCTCATTCTGGAAAACATTGCCTTTACTATAAAATTAGATGGAAACCTAGCTTTTTGCTATGGGAAATTTGCCTGACTAAACGCTAAACATGAGGTGTAAGTTGAATCCGTGTTGTGGCTAGGTGGCTGGGCTTTGGTGTGTTTTTGTGGGAAATTTGCATGGAGAAATGTAAACACAGGGCCTTTTTGGCACAGCTCCAGCTCCAGCTCCAGCTCCACATCTTCTGGAGCTGGAGCCTAGCTAAACAGTTTCAGCTCCACCTAAAATGGGAGCGGAGCTGGGTGGAGCACTCACACAAAATGAACTAGAGAGGTTTAGCTGGGTTTAGGCTGCTCCACAACTCCACTCCAAACCAAACTTCTGGAGCTAAATTTAGGAGTTAGAGCTCTACCAAACAGGCCCTAATGTGCAAGGTGGATTTGCTTTGTGGTTTTCTATAACCATGCTTTGTCATATACTCATATTTTTTACCGTTGGGTGATCAACTGCTTTTTTTTTCCCGTTAAGTTATTCGCCAAGACTTCTCTTTGCTGGCAGCTCCATATCTCAAAATTCACTGGTACTAATCGCACATTAAAATTCTTGTTGCAGGTTCTGCGTGCACACCGTGATGAAGTATGGTTTCTTCAATTTTCAAACAATGGAAAGTATTTAGCCTCAGCATCAAATGATAAATCCGCAATCATATGGAAGGTAAAAATTACGAATCTATCCATGAACATAGTGGCTTATTTGCATGGAGCTGTTTGTTTAGCAGTCCAATAGCCTGTTGTCCCTGAACTTCCCATTTTGCACCTTTGGTCAAATCATGATTTTGCACAAGTTCATTCAGGCCTGATTGGGTGGGAGGATTTGGATCCTTTCATTGAATTAAATCCGAGACATTCTTAGAACAATCCCTTCTGTACACCTCAGGTTTTGTGTCTCTGCTGTTACTTCTGTCTGAAGTGAATTCTGAAAAAAAAAAACGATCTCTGAAAATTAAGATAAAATATTGCCATTTATCTGATCATTTCATCAGTCTACTTGAGAGTTATCTCCAGCTAGCTTTATCAGCAAGGAATCTAATATAGATATTTGCCAATTTTGCCCTATGAACTTGTAGTATAACACCTTTTTCCCTAGCTTGTAACTATTGCCATGAAAGTGCATATTTTCTCATCTGGTCACAGTAGTCTGTCTTACATTCCACCTAATCTAAGTTGGTTCTTATGCATGTCATTTTCAGTTTAATTAGCTGAGCTTATAGTCATCTGGTATATCTATGCCCAAGGACATTAAATTTTTGAAACTTATTCTTCAATTTTTTTCGTCAAGTCTTCTTCACAATTCGAATCCTCATTAGATCTCTTTGCAGCAGGTTGGCATAAAATAAAATTTTAATTTCTTGGTCTCACAGTTTCTCCCCTGCAACAATGCTTTATTTTAGTGACTGAATCTCCTCTACAAGATTTTCCCTTTGTCTTATGGAAATTAGTATGTTGTATTTAATCTGTTGCAGAGAACTTCATTATATGTTTTGTTTTTGTTATTGATCATGATGTAAAGGGTCTTTTCTTGATATTCTCTTGATGCAAAGCACATGCTATCATTCCCTAGGTTGATGAAGATGGAGAGCTATTGCTAAAGCACACATTGACTGGTCATGACAAGCCAGTCATGATGGTTGCATGGAGCCCTGATGATTGCCAGCTTCTCACATGTGGAATGGAAGAAGTCATTCGGCGTTGGGATGTTGAATCTGGCAAATGTCTTCATGTTTATGAAAAGTCTGGCATTGGTCTGATCTCATGTGGTTGGTTTCCAGATGGAAAGCATATATTGTCTGGTCTAACTGATCATAACTTTTGCTTGTGGGATTTGGATGGTAAAGAAGTAGATTGTTGGAAAGGCCAGAGATCATCTAAAACATCTGATTTTGCCGTATCAAACGATGGCAAGCTTATAATAAGCATGAATAGAGAGTCCACCATTCGTTTATTTGATCGGGAGACAAAACAGGAGAGATTGATTGAGGAGGACAACACAATCACATCATTTTCTCTTTCAGAAGATGGTGATTTCTTGCTTGTAAACCTTATAAGTGAGGCGATTCATTTGTGGAACATAAGGAATTGCCCCATTCGAGTTAACCGGTATGCTGGTCATAAGCGCAGCCGGTTTGTGATAAGGTCTTGTTTTGGTGGATCCGAGCAGGCCTTTATTGCTAGTGGTAGTGAAGATTCACAGGTATGGTGATTTTGCTTGATGGCCACCTATCACTATAAAATAATGATATGGATGTTGTTAAATTTCGTTGTTACAGTGTTCTTCTATTACTTGTGCTAATGATTGGCATTCTGCATTCTAGATTTCCTCAGTATGTAAGGAAAATATAGTCATAGCATACGTAAACATCCTCAATACATTGGATTATTACACTGTATACAAAAACATCACTACATCTAGTTCACTTTTGGAACCTTGCACAGTACCGCAAATGTATTAATGTTTAGGCCTGTTCTTCAGATTTACACTGTGTTTTCTTGTTATCTAGGCATCGACCACCTCATTTTCTCCAAAATGTTATGAATGCATAAATATTGATTGCTGTTTTATCAAGTCTAATGACTTGGAACGGCTGCTGCTGATTTTATTTTTAGAATAGAGGTGACAGATGAGTTTAAAGTTTAATCCAAATAAATATGCATTATTATGTTGGGATATTTCGTCAGAATTTACTGTCTTTATACTGATAATTAGTAGTCTACCAGATAGAACCATTTAGTATTCCAGTAATGGCACCCATTATCTGATATACAAAATTAATATGGAAAAGAAGAAAGATGAAATGCTACAAATTACTTTGGATGGAGCTAGTTAAGTCTCAAAATTGTTATGGCAAACAAAGTGTGGAGCTATGTGCTGTCTAGCGTGGTCTAACCACTAGATTGTCACGCATCTTTTCCTATCATCTGCATCTATATATCTTGTCCTGTCTTCTGCAACTTCCGTAACCTCAAAATCTGGAATAATTTTCCTACTTCAGATCTATATATGGCATAGAGCTACTGGAGATCTTATTGAAACTCTGCCTGGTCACACCGGCACGGTCAACTGTGTGAGCTGGAATCCTGCGAATCCGCACATGCTTGCATCTGCAAGTGATGATCACACAATTCGTATATGGGGTTTAAAGAAGGCCAATCTGAAGCGCAAGGATGTTGGCAGCAGCAATGGGATCTATGCAAATGGTAATACACCCAGCAATGGTGTGGTACACCAGTGCAACGGGAACAGCAGCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008008