BGIOSGA008016

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Revision as of 03:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008016| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008016, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008016

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008016, complete gene.

LocusTag

OSJNBA0030M21.14

Ensembl Transcript ID

BGIOSGA008016-TA

Ensembl Protein ID

BGIOSGA008016-PA

Length

6116

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12291975..12298090

Sequence Coding Region

12291975..12292067,12292174..12292503,12296988..12297515,12297596..12298090

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12291975..12298090 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12291975..12298090 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGAAGCACGCCGCCGCCGGCAGCGGCGGCGGGTGGCTCGCCGCCGTCAGGAAGGTCTTCCGCCCCTCCAAGGACGCCGCCGACAAGAAGGGTGGCGGCGGCGGCGATAGGGAGGAGGAGGCGGCGGCGGAGGTCCTTCTGCTGGAGCATTTCCCGGCGGGCGGGACGTCGCCGTCGGCGGAGGGGACGGGCAATGATCAGGGCGGCACGGTGGTGGGGAAAGGGGAGGGTGAGGAGGAGGACGGCGAGGACGGGTACGGCGAGGTGGAGCGCGCGAGGGCGCTGGCGGCAGCGGCGGAGGCGGCGGTGGCGGCGGCCGAGGCCGCGGCGAGGGTGGTGAGGATGTCGGCGCTCCGGCGCGCGTCGCGGGAGGAGCGCGCCGCCGTGCGCATCCAGGCATTCTACCGCGGCTACCTGGCGCGTCGAGCCCTGCGCGCGCTCCGCGGGCTGGTGCGGCTGCAGGCGCTGGTGCGCGGTCACCAGGTGCGGCGCCAGGTCCACCTCACCATGCGCTGCATGCAGGCGCTCGTCCGCGCCCAGGCCCGCGTCCGCGCCCGCCGCCTCATCACCGACCACCTCCACGCCGGCGTCGCCCCGCTCCGCCTCCCGCCCCTTCCTCCCGCCACCGCCGCCGCCACCTACAGCTCCCGGCGACGGGAAGGCGGATACTCGTGGCATCCTCTCCTCAACAATTCGTACCACGCTCAGCTCGGCGAGCGAGACGAGAGCGACGACGACGTCGACGGCGACGGCGGCAAGGTTGGCGAGCACGCGCGGCAGCAGCAGCAGCGGCAACGAGGCAACGACGTCAGGAGCAGGAGCCCTTTCCGGAGCTGGGACGGCAGCAGCCGCACCCCGGAGGAAGACAGGGCCGAGGGCGCGCGCCGGCACGACGCCGCCGCTCGCCGCGAGCGCGCGCGCGCCTACGCCTACGGCTACCAGCAGAGACAATGGCAGGAGAAGGCCGGCGGCTTCCAATGGCTGGACAGATGGATGGCAGCGCAAGCGCAGCAGCACGCGCCGGAGCCCGACAAGAGCCGCCGCAGAGCCGCCCTGACGGCCGCCGCCGACGGCACCACCATGCCCGAGAGGACGGTCGAGATGGACACGACGTCGTACCGGAGCCCGCTCAACTCGCACTCCGCCGCCGTGCAGGGCCGGCCGCCGGCTGTCCCAGGTTACATGGCGGCGACGCAGGCGGCGCGCGCCAGGGCGCGCACGGCGCCGCCGGCCACCCCGGCGCACGCCAGGAGCCGGTCCGGCGCCGTTCTCGCCGGGGACACGTCGAGCTCGGGGCAGAGCGGCAGCGGCAGCGGCGGCGGCGGCGCGCATGTACAAAAACCGTGCGCGGTGTACAGCCCGGAATCGAGAGGCACCGGCGACTGGACGCCGCCACGGCTCGCCGTCAGCAGCCGCGCCACCAGGTTGGTGTACGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MGKKHAAAGSGGGWLAAVRKVFRPSKDAADKKGGGGGDREEEAAAEVLLLEHFPAGGTSPSAEGTGNDQGGTVVGKGEGEEEDGEDGYGEVERARALAAAAEAAVAAAEAAARVVRMSALRRASREERAAVRIQAFYRGYLARRALRALRGLVRLQALVRGHQVRRQVHLTMRCMQALVRAQARVRARRLITDHLHAGVAPLRLPPLPPATAAATYSSRRREGGYSWHPLLNNSYHAQLGERDESDDDVDGDGGKVGEHARQQQQRQRGNDVRSRSPFRSWDGSSRTPEEDRAEGARRHDAAARRERARAYAYGYQQRQWQEKAGGFQWLDRWMAAQAQQHAPEPDKSRRRAALTAAADGTTMPERTVEMDTTSYRSPLNSHSAAVQGRPPAVPGYMAATQAARARARTAPPATPAHARSRSGAVLAGDTSSSGQSGSGSGGGGAHVQKPCAVYSPESRGTGDWTPPRLAVSSRATRLVYA</aaseq>

Gene Sequence

<dnaseqindica>1..93#200..529#5014..5541#5622..6116#ATGGGCAAGAAGCACGCCGCCGCCGGCAGCGGCGGCGGGTGGCTCGCCGCCGTCAGGAAGGTCTTCCGCCCCTCCAAGGACGCCGCCGACAAGGTAGCAATGGCGGTCGCGTGCGTGGTTCTCATCGTTCTTGATCGTATCGATCACGGTCACGGTTCGTGTGAGTCACTCTCGATCGTGTCTCGTGCGTGCGTTGCAGAAGGGTGGCGGCGGCGGCGATAGGGAGGAGGAGGCGGCGGCGGAGGTCCTTCTGCTGGAGCATTTCCCGGCGGGCGGGACGTCGCCGTCGGCGGAGGGGACGGGCAATGATCAGGGCGGCACGGTGGTGGGGAAAGGGGAGGGTGAGGAGGAGGACGGCGAGGACGGGTACGGCGAGGTGGAGCGCGCGAGGGCGCTGGCGGCAGCGGCGGAGGCGGCGGTGGCGGCGGCCGAGGCCGCGGCGAGGGTGGTGAGGATGTCGGCGCTCCGGCGCGCGTCGCGGGAGGAGCGCGCCGCCGTGCGCATCCAGGCATTCTACCGCGGCTACCTGGTACGTACGTATACGCGCGCCTAGCAAACCAAACCTGAAAAAAATCATGCTCTGTTTATCAGGATAATTTTGTGCAAACATGCTTTTACTATATTTATCTTTTCTAAAATAATCGTGTGCATATTTGCATCCACATCAAATCGTCAACTACACAAAAACTATATGGTAATAATTTATTGTTAAAAATGTTACCGAAGATATGGATTGTTTTAGAAAAGATAATAATTTATTGTTAAAAATGTTACCGAAGATATGGATTGTTAAAAATGTTACCGAAGATATGGATTGTTTCTGTTTCACAATATTTATTCATTAATTTGAGCCATTATTTCACATTATTTAGTGAGCGTGTGTATAGGGGGCTCACTTCACTCGCAAGTAGTGTGGGCGTGCAGAGTAGAGTTTGTGTTTGTGCGCCACTCACGTAAAAACAACCGTATGACTAAAATCGAAACAGCAGTTATTGAAACATTTTGACCTGCAGAGAGGTGGTAGTTAGTTATAGCATTTAAAAGAGGCATCTACTGTCGTTTTGTCCCAACTATTTGCTGGGGTGAGATCTTGGCAAGTGTACATGTTTTTGTTTATAGTAACAAGTTAACTGTAAAAAGTTTGAAAACGAACAGAGTACCAGTTGGATTACTGATAGAACATTTCCCCGCAAAATAAATAAATAAATAAAACGAAGGACTGCCAGTAGAACATAACTTTCACAATCAAAACACCACCAACACATTAAGTCTTTTGCGCCAGACAAAAATTCCGAAGGGAAGTACACAAGAAATCAAAAGAAAAATCATAATCAAGAATTGAGAGGCAAAAAAGGTGGTGAGTGTGTGCTCAAGTTGGTGGCAAGATCTCGTGTTAGAATCAGTGGGGGCACTTTTAAGGTGATCAGTCTTAACTCATCTAGCTTAAAACCTACAAGCGAGGTATCAGGATCGCTTACACCGCAAGGAGTGACTGATTAGATAGATCTTAGGGACCAGGGGGAAGAGGTGACTTGGGGACAAAACATGAATCAATTATTACATGTTTTCTCAGCTTGGGGGGGATTCAAAATGTTTAACACCGTTGACTTTTTAGTATATGTTTGACCGTTCATCTTATAAAAAAATTTATGAAATATATAAAACTATACGTATACATGAAAGTATATTTAACCATGAATCAAATGATATGAAAAGAATTAATAATTACTTAAATTTTTTAAATAAAATGAATGGTCAAACGCGTACTTCAAAAATCAACACTGTTAAACATTTTAAAACGAAGGGAGTATATTACATGAATCAGCACGGCTTAACGCAGTACAGAGACTACTTCTCCTACCTGTGATATTGATCATTGGTCGTCTCATATGCATATCCATCCACCTTGCTTGATTGGCACCTACCATATCAGACCATCCAGGACGGATAGTAACTGCGTTTCATGTCCGGATGCCAAACAACTGGGTACTACTTGACAGTTTCAACGTTGGACCATTGTGTATTGCTTTTTTGTGTGCAGTTTAGTGCTTGTCTTCTAGTGTAACCGCAACAAATCGTGTGCTGTAAGTCCCATGATTACAGAGGAAATAATGCATTCCGGTCAACCATATTAGCCCAAATCCAGTGCTTAAGCCACTAAACATTCCTTGTTTTCTTTATTTTACGCAAATTGGTTACACACAATATTTGTTAAGACTATGACTCCTTTGGAAAAACACAAGGCACTGCTTGATTATAATTTCAGTTTGAATTTTAGAATTTGATTCTAAAACTAATTTTTGGCAGGCCGGGTTTTCTTCGCCAATTTTATTAGCAAGCTCTATTTTTATGACTAAACAATATTCCTAAATAATTTTTAAAGAAATCAAATTTCAAAATTTTGCCTTTTTCTAGTCAAAGTAGTGACAAGCACAGCCTGTATATTTTTGTTGAATTAATTATTAAACTCTTTTGAAAAACCCTCCTTTAAAAAGACATTTTTAATTTTTTAAATCTTTATTATAATACTTCACAAATAAACCCTAGCCTAGCAAAAAGAACGAACAAATGAGCACACAAACCTCAAATGGGGAGATATTTTTGGGGATGTAGCCTAACTTGAATGTGGTTCAAATTGGGCCTCGAAACATAGTATTTCACCGAGGATTGGGATAAGCAAGAGGGGAGCGTATCCTATGCACACAGGCCCTCACGTGTACACACCGTGTACACCAACTAAAAATTATCACAAAAAATTCTAGGAAAATTCATACATATACTTTCAATAGTATTACATCTACGTGCAAAGTCGCATCTTCAAATTCATTCTACATAGAGAATAACAAAAAAGATAAAATTCTGACAAAATTGCAACCTCAAAACTGTCAGATTTTTTGTTTTTTTTGTTACAGTTAAAATATAATGAATTTGACGTTAAGATTTTAACCCTAGGTGTAATACAATTGAAAGTATGTGTATGATTTTTTTTAGATTTTTTAGTGACATTTTTTAGTTGGTGTGCACGTGTGTACACGTGAGGGCCTGTGTGCATAGGATATGTTGCCAAGCAAGAGAGAGGGATAGCAGGTTGGTCTAGGAAACACCTAGTACACGCTCAGTTACACGGGCGCCCCTGCACGGTGGGTTTCCCCCTCTGGTCTCTCCTCTGTATACGAACTTTGTATACATATGATACAAATTTTATACGTATGTATTCAAAGTATATGCATACGTGTATATATAAAGTTTATATAGTATTTGTTTACAAACTTTGTATATAGACTTATACAACTTTTATATGTATATAAATTGACACGTATATGTATACTTTTTGACATATAAATATTTTTATTAATATGCGTGTACAAAATTGTCTGTATACATATACGAATGTTCGTATGGTACATTTGTCGTGCGGTAAGACACGCGTATGCCTAGTCGCTAATTAGTGATTTTGGTTGGTCTAGTCAAGTACGCAGGAAAGTGAGAGAGGAGAGAAGGAACGAAGCAGGAGCCGACCCCGAGCCTTATTAGGGCATGTACAAAATTAGAGTCAGATGTGAGCTCTATCACCTAGAAATTATTCTCTTACAACATTTGAGGCAATATAGTATCTAACCATTAATGTATGAAAATATTTTTTTCTTTCTCTTCTTTCCTTTCTTTCAACCCCGTGCAACAAAATATTTCCTAATAAATGCTAAGAGTTGACTTTAAGATGTCATGTGTAACCATGTTTCTCTTTCCTGTTATTTCTTTCTTTCATGTCACCAAATTTACTTGTATGGTAATTTATAGAACCCACTAATAAAAATCGTTGTACATGCCCTTGACCTCTGCCATATTAGATAGATTGGAGCAATCTTAACACGCCATTTACCTTATGTGGTCCCATATCCTCTGCTATCATGACATCCTTTGCCATGCTACATGCGCATTGGCCACATTGAAAATAACAACTTGATTGAAACATAAACATAGTGTAGTATATTTTTAAATTTTTATAATAAAAAGGTTTTAAAAAGTTCTCCAGAGGTCTTAGGCTGAGTTCTTTTCTTCTAGTTACCAACTCCCTTCGATTGAGGTCTATAGGAAAGTTACTCTAAAAATGATATATCTATTTTTAAGTTTTTTAGATAATACGTTAATAAATCTTCGTGTTAATTATTTGCTTTGGTTTTCACGCGTGGCCAGGAGGCATACAGGTTGCTCTGTCTTCGAACTCAGGCCCCGTTTAGTCACAAAATTTTTTTTCCCAAAAACATCACATCGAATCTTTAGACATATGTAGGGAGTATTAAATATAGATAAAAATATAAACTAATTGCACAGTTAGGGAGGAAATCGCGAGACGAATCTTTTAAGCCTAATTAGTCCATGATTAGCTATAAGTGCTACAGTAACCCATATGTGCTAATGACGGATTAATTAGTCTCAAAAGATTCGTCTCGCGGTTTCTAGGCGAGTTATGAAATTAGTTTTCTCATTTGTGTCCAAAACCCCCTTCCGACATCCGATTAAACGTCCGATGTGACACCCAAAAATTTTCTTTTCCCTAAGGGCCTGTTTGGTACAGCTCCAACTCCTAAATATAACTCCAGGAGTTGAGTCTGGAGTGGAGTTGTGGAGCTACCTAAACCCAGCTCCACAACTCTAGTACATTTTGTGAGAGAGCTCCACCCAACTCCACTCCTAGATCTGGTGGAGCTGAAACTATTTGGCTGAGCTCCAGCTCCAGAAGGGGTGGAGCTGGAGCTGGAGCTGTACCAAACAGGCCCTAACTAAACAGGCCCTCAGCCTTATAGTAAATTCAGATATTGACAGCTCTTGCCAATAAAATCTCAATTGTTTCATTTAGTCAGTTGATAGTTTGAAGACACAATCATCAAAATGTGCCAAGCTAATTTTTCAAAGAGTTTTGCACAAATTTAGTTTTGAATGTGTATCATTTTCCTTTTTATTTTCTTATCAAGGAAAAGAAAATAAACAGTGTCTCTGATGTTGACGTGGCAGGCGCGTCGAGCCCTGCGCGCGCTCCGCGGGCTGGTGCGGCTGCAGGCGCTGGTGCGCGGTCACCAGGTGCGGCGCCAGGTCCACCTCACCATGCGCTGCATGCAGGCGCTCGTCCGCGCCCAGGCCCGCGTCCGCGCCCGCCGCCTCATCACCGACCACCTCCACGCCGGCGTCGCCCCGCTCCGCCTCCCGCCCCTTCCTCCCGCCACCGCCGCCGCCACCTACAGCTCCCGGCGACGGGAAGGCGGATACTCGTGGCATCCTCTCCTCAACAATTCGTACCACGCTCAGCTCGGCGAGCGAGACGAGAGCGACGACGACGTCGACGGCGACGGCGGCAAGGTTGGCGAGCACGCGCGGCAGCAGCAGCAGCGGCAACGAGGCAACGACGTCAGGAGCAGGAGCCCTTTCCGGAGCTGGGACGGCAGCAGCCGCACCCCGGAGGAAGACAGGGCCGAGGGCGCGCGCCGGCACGACGCCGCCGCTCGCCGCGAGCGCGCGCGCGCCTACGCCTACGGCTACCAGCAGGTGCGCGCTCCCACGCCTACCGTGGATGTCTCGACTACTAGTACTTGACGAGCAACGTTTTACTGACCATGATCTAGCAGAGACAATGGCAGGAGAAGGCCGGCGGCTTCCAATGGCTGGACAGATGGATGGCAGCGCAAGCGCAGCAGCACGCGCCGGAGCCCGACAAGAGCCGCCGCAGAGCCGCCCTGACGGCCGCCGCCGACGGCACCACCATGCCCGAGAGGACGGTCGAGATGGACACGACGTCGTACCGGAGCCCGCTCAACTCGCACTCCGCCGCCGTGCAGGGCCGGCCGCCGGCTGTCCCAGGTTACATGGCGGCGACGCAGGCGGCGCGCGCCAGGGCGCGCACGGCGCCGCCGGCCACCCCGGCGCACGCCAGGAGCCGGTCCGGCGCCGTTCTCGCCGGGGACACGTCGAGCTCGGGGCAGAGCGGCAGCGGCAGCGGCGGCGGCGGCGCGCATGTACAAAAACCGTGCGCGGTGTACAGCCCGGAATCGAGAGGCACCGGCGACTGGACGCCGCCACGGCTCGCCGTCAGCAGCCGCGCCACCAGGTTGGTGTACGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008016