Os12g0577100

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0577100| Description = Hypothetical protein| Version = NM_001190095.1 GI:297729320 GeneID:9271153| Length = 2778 bp| Definition = Oryza sa...")
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Gene Name

Os12g0577100

Description

Hypothetical protein

Version

NM_001190095.1 GI:297729320 GeneID:9271153

Length

2778 bp

Definition

Oryza sativa Japonica Group Os12g0577100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24046149..24048926

Sequence Coding Region

24046268..24046276,24046369..24046449,24046549..24046617,24046712..24046787,24046888..24047054
,24047461..24047565,24047650..24047718,24047835..24047897,24047984..24048102
,24048205..24048691

Expression

GEO Profiles:Os12g0577100

Genome Context

<gbrowseImage1> name=NC_008405:24046149..24048926 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24046149..24048926 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaaggttaagacagctttcgttggaaatttaccagcaaatgttacagaggagtatttaagaaagctttttgaacattgtggagaggtagtacgggttgcagtctcaaggaaaggacaatatccagttggatttgtccactttgccagtcgtacagagctcgacaatgcaataaaagaaatggatggtgaaacagtgagaggacctgaccgaggggcaactttcaggatccaggtctcagttgctcggcctgtggtagagaacgataaaaagagaattcgtgaagaagtgaaaactagaagatcaaacgtatcaacagacaagccggaccattcttatggaagacgtggacatgattcatatgatcgtcaagcaaaagctccaaggctatataatgaggtgtctgatacggacccctatgaagcagctgttgtttcactaccttcagccgtcaaggaactcctacttcgtattctacgtcttagaattggcactcgatatgatatagacattcattgcataaggagtcttaatgaacttcctgaaaaggctgcagttgctgtccttaatcagtttttgatatcaggtgcagataaacacaataaaggagactatttcgcttcattaattgctaagtaccaggctgagacatttagctcagcactaagattgcagggttctacttatttgccaagaaatcctgaaatacagaacaagagattcccacatcaagattacgagtacacagcatccgggagtagtagatacagttccttaggtgattatccttcctcatcttatgtggatgatcccgcatcatctcagtcaaggaatagaaggtatgatgaatacagacctgatcttgtaagatatccagattcaagatcacggcaagaggaaatagtccgcattgaaagatatccagaaccaagatttgcacatgaaccaagacaggatactggaaggcatctcgatctagggtacgtacaagaacggaattcgaatattgagagatcagctcaagtagctttttcatctagggaaggaggatacttatctgcttcaaggtacaacacaaacatagtcccagaattcagctccaggtcatctgctgaatactctactgctcgccaacaagtaaggtttgatccattcacaggggaaccatacaagtttgatccctacaccggtgaacccatcaggccagaatcgaacccacgtcgctcaggaagcttatactga</cdnaseq>

Protein Sequence

<aaseq>MAKVKTAFVGNLPANVTEEYLRKLFEHCGEVVRVAVSRKGQYPV GFVHFASRTELDNAIKEMDGETVRGPDRGATFRIQVSVARPVVENDKKRIREEVKTRR SNVSTDKPDHSYGRRGHDSYDRQAKAPRLYNEVSDTDPYEAAVVSLPSAVKELLLRIL RLRIGTRYDIDIHCIRSLNELPEKAAVAVLNQFLISGADKHNKGDYFASLIAKYQAET FSSALRLQGSTYLPRNPEIQNKRFPHQDYEYTASGSSRYSSLGDYPSSSYVDDPASSQ SRNRRYDEYRPDLVRYPDSRSRQEEIVRIERYPEPRFAHEPRQDTGRHLDLGYVQERN SNIERSAQVAFSSREGGYLSASRYNTNIVPEFSSRSSAEYSTARQQVRFDPFTGEPYK FDPYTGEPIRPESNPRRSGSLY</aaseq>

Gene Sequence

<dnaseqindica>120..128#221..301#401..469#564..639#740..906#1313..1417#1502..1570#1687..1749#1836..1954#2057..2543#atcgatcacaggctgcagcacgcgtacttcgtattggttccagaacagattttctgcttggtggattgcatccttcaataaattgggctgagaaggagtctcatgtagatgaggacgaaatggccaaggtaatgtaaatgacaaacacttttttttattgatatagatatagatatagatattttctatcttgatatgttttcatttcgtctatatccaggttaagacagctttcgttggaaatttaccagcaaatgttacagaggagtatttaagaaagctttttgaacattgtggagaggtctgttatgcgccaatgtggcagccaaatgtgtgcgttcaccagttttatttgaaatattaaataaatctgaaaagtaaagcattaatgtttaattaggtagtacgggttgcagtctcaaggaaaggacaatatccagttggatttgtccactttgccagtcgtacagtaagtatttgtacatgttgttttaatcctattgagttttataggttgaactctcatacaagttgttgtcattatctttttttgttgatggaaggagctcgacaatgcaataaaagaaatggatggtgaaacagtgagaggacctgaccgaggggcaactttcaggatccaggcatgaataagaatgttatttctgtggagcaacttatagattcttattgcttattttacttttgtactattggatttgacatccctgtttattgcaataggtctcagttgctcggcctgtggtagagaacgataaaaagagaattcgtgaagaagtgaaaactagaagatcaaacgtatcaacagacaagccggaccattcttatggaagacgtggacatgattcatatgatcgtcaagcaaaagctccaaggctatataatgaggtactacatacgaatgataagctccttcattgtgccctgaaagggtcaaatcagagttaaccatttactctcgcacttcagtccactgttttattagtctgtgatgtcacaaggttcattctgtagttttttatcagtttgtataaactagactatgttttagtttgttctgtaggatttgttatttgtaccggtttctatgaactcaacaatttttttagttcacttcaaaagcatggcacaacctattccagcttcaaacagttgaatcagcaatttttctgtcctttgtagttctggattttatatgaatgcttagtcgaaggaataaattgcatataattcaataaggaacgccatgtttgttgacatgataacccttttctgccaattttcttttttgcaggtgtctgatacggacccctatgaagcagctgttgtttcactaccttcagccgtcaaggaactcctacttcgtattctacgtcttagaattggcactcgatatgatgtaagtaatctgtacataaggtctctacttgtgccttttttgggtgtgtaaaacatggtctgcctgtccattttactttttcagatagacattcattgcataaggagtcttaatgaacttcctgaaaaggctgcagttgctgtccttaatcaggtatggagttgtttcatgcacatgatctctgactctgagatctgacctgttctaccatatcattatgcttagctaaaaatggcattcattattctgatgattattcctgctcgcagtttttgatatcaggtgcagataaacacaataaaggagactatttcgcttcattaattgctaaggtttttactacctacctgattcaatatttcacctttttagtgtttttttgattgatgtgtacaatttgtccccttttcatttgcagtaccaggctgagacatttagctcagcactaagattgcagggttctacttatttgccaagaaatcctgaaatacagaacaagagattcccacatcaagattacgagtacacagcatccgggtaaactattttttttctaggacaatgaaaattttattttcaactgttctacatctgtgtaaactttgagcctggcaccattgatctatgttttacttgcaggagtagtagatacagttccttaggtgattatccttcctcatcttatgtggatgatcccgcatcatctcagtcaaggaatagaaggtatgatgaatacagacctgatcttgtaagatatccagattcaagatcacggcaagaggaaatagtccgcattgaaagatatccagaaccaagatttgcacatgaaccaagacaggatactggaaggcatctcgatctagggtacgtacaagaacggaattcgaatattgagagatcagctcaagtagctttttcatctagggaaggaggatacttatctgcttcaaggtacaacacaaacatagtcccagaattcagctccaggtcatctgctgaatactctactgctcgccaacaagtaaggtttgatccattcacaggggaaccatacaagtttgatccctacaccggtgaacccatcaggccagaatcgaacccacgtcgctcaggaagcttatactgactttgattgattgaagcaacagtttggatatggtagattagatttacatccctgaaccaaaaggaccatatactgctcttgcatgttgtaaacctagtgtatttgatgtgcctcagcattgtaatgttagaaatccattttcatccatgtcactggaaaactatggttgaaacaacagtaataagttctatcatttatgatggcatctgatgatatgaattagggaaaactaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0577100, RefSeq:Os12g0577100