BGIOSGA008021

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Revision as of 03:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008021| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008021, complete gene.| tag = OS02G03...")
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Gene Name

BGIOSGA008021

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008021, complete gene.

LocusTag

OS02G0301500

Ensembl Transcript ID

BGIOSGA008021-TA

Ensembl Protein ID

BGIOSGA008021-PA

Length

4965

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12473823..12478787

Sequence Coding Region

12473823..12477151,12478394..12478787

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12473823..12478787 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12473823..12478787 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGACGGCGGCGGCGGCGGGGCCCAGCGACGACGGACTCCGGAAGCTGGAGTACCTCTCGCTGGTCTCCAAGGTGTGCTCGGAGCTGGAGACCCACATCGGCGTCGGCGACAAGGTGCTCGCCGAGTTCATCACCGAGCTCGGCCGCGACTCCGCCTCCGTCGCCGACTTCGACACCAAGCTCAAGGCCAACGGCGCCGACCTCCCGGACTACTTCGTCCGCACCCTCCTCACCATCATCCACGCCATTCTCCCGCCGCCCTCCGACTCCCGCAACCCTAGCTCCGCGTCGCAGCCCGCCGCGGGGGGCTCCAAGTTCCCCGGCCTCTCCCGCCCCGACGACCCCGACCGCGCCCGCAACCTCCGCCTCGAGCTCGAGCGGGACGCCGAAGAGGCCGCCGCGACGGCAGCCCCCGCCCCCGCCAGGGACGACCGCGGCCGCCGCCGTGATGAGCGAGGACGGGACCGGGGTCGAGATGACCGCGGCCGCGACGACCGTGGGCGTGACCGCGACTATGAACGCGGCGGCCGTGACCATGACCGCAGCCGTGGCCGGGATCGTGACCATGGCCGTGACAGAGACCGAGATCGAGCCTGTGATGGGGATCGACAACGTGGCCGTGACTATGGCCGTGATAGAGACCAAGACAGAGATCACGATAGGGATCGTGAAGGTGAATGGCGGAGGGACCGAGATAAGGATAGGGGTAGAGACATTGACAGAGATATGGACAGGGACCATAGGCGAGGCAGGAGGTATGATGATGAGGAAGAACCAGAACAGTTTGGTGGAAGGAAAGAAGGCGCTCTTGTGAATTCCAGTGGTGAGCCAGAGTTGTACCAGGTGTACCGGGGTAGGGTGACACGGGTAATGGACACCGGTTGCTTTGTCAGGCTTGAGGATGTTCGTGGAGGACGTGAGGGTCTTGTTCACATCTCACAAATGGCAACCAGGCGAGTGGCCAATGCGAAAGAGATGGTGAAGCGTGATCAGGAGGTGTATGTTAAGGTGGTTTCCGTGAAGGGCCAGAAATTGAGTTTATCAATGAGGGACGTAGATCAGGATACAGGGAGAGATCTCCTGCCAATACAACGTGGTGGGGATGATGCACCAAGGGCGAACCCATCTGGTGGTAGTGCTAGTGGTGTTGGTGTGGGCTCTGGCAAGAGGCTGGGTCTCTCTGGGATTATGATTGCAGAGGAGGATGAGGTTGCACCTCCTTCACGTCGGCCACTTAAGCGGATGAGCTCTCCAGAGAGGTGGGAGGCGAAGCAGCTGATTGCTTCAGGTGTTCTGGATGTGAGGGATTACCCAATGTTTGATGAGGATGGGGATGGTATGTTGTACCAAGAGGAAGGGGCAGAAGAGGAGCAGGAGATTGAGCTTAATGAAGATGAACCTGCTTTCTTGCAGGGACAGAGTAGATTTTCGATTGACATGTCACCTGTTAAGATTTTCAAGAATCCAGAGGGCTCATTGAGCCGAGCAGCTGCTCTCCAAACTGCTCTCATAAAGGAGCGGCGTGAGGTTCGGGAACAGGAACAGAGAGCAATGTTGGATTCAATCCCCAAGGATCTGAATCGGCCATGGGAGGACCCTATGCCTGATACTGGGGAACGGCACCTTGCGCAGGAGCTGAGGGGTGTTGGACTTTCAGCTTATGACATGCCTGAATGGAAGAAAGAAGCCTATGGAAAGGCTCTGACATTTGGGCAAAGGTCTAAGCTTTCAATACAAGACCAGAGGCAAAGTCTTCCAATATACAAGTTGAAGAAAGAGCTGATACAAGCTGTGCATGATAACCAAGTCTTGGTTGTTATTGGAGAGACTGGTTCTGGTAAAACAACACAGGTGACACAATATTTGGCCGAAGCAGGCTACACGACCAGAGGTAAGATTGGTTGCACTCAACCTCGTCGTGTGGCTGCAATGTCTGTTGCTAAGAGAGTAGCAGAAGAATTTGGTTGTCGACTTGGAGAGGAAGTTGGTTATGCCATCCGCTTTGAGGATTGCACTGGGCCTGACACGGTAATCAAATACATGACTGATGGCATGCTTTTGCGTGAGATTCTTGTCGATGAGAACCTTTCCCAGTATTCTGTAATTATGCTTGATGAAGCGCATGAAAGGACCATACACACAGATGTTCTCTTTGGCTTGCTGAAACAGCTTATTAAGCGCAGATCTGACATGAGGCTTATTGTTACTTCTGCTACCCTGGACGCAGAGAAGTTCTCAGGGTATTTTTTCAATTGCAACATCTTCACAATTCCTGGAAGGACGTTCCCGGTAGAGATACTCTACACCAAACAACCAGAAAGTGACTATTTGGATGCAGCATTGATCACCGTGCTTCAAATACACTTGACTGAGCCAGAAGGTGATATCCTCCTTTTTTTGACTGGTCAAGAGGAGATTGATCATGCTTGTCAATGTCTTTATGAGAGGATGAAAGGGCTAGGGAAGGATGTTCCTGAGCTCATAATATTGCCTGTTTATAGTGCTCTTCCGAGTGAAATGCAGTCGAAAATCTTTGACCCAGCTCCTCCAGGGAAGAGGAAGGTTGTTGTGGCCACCAATATCGCTGAAGCTTCTCTAACCATTGACGGCATATATTATGTCGTCGATCCTGGTTTTGCCAAAATTAATGTTTATAATTCAAAACAAGGACTCGATTCATTGGTCATCACTCCAATCTCTCAAGCATCAGCGAAGCAGAGGGCAGGGCGTGCTGGGCGTACTGGCCCTGGCAAATGCTATCGTCTATACACTGAAAGTGCATACCGCAATGAAATGTCTCCCACAACAATCCCAGAAATTCAAAGGATTAACTTGGGGTCTACAGTTCTCAACATGAAGGCGATGGGAATCAATGACCTATTATCCTTTGATTTCATGGACCCTCCTGCACCTCAAGCACTTATATCTGCAATGGAGCAATTGTACAGCCTAGGTGCTCTTGATGAAGAAGGGCTCCTTACCAAACTGGGGAGGAAAATGGCTGAATTTCCACTGGATCCACCACTTTCGAAGATGCTTCTAGCCAGCGTTGACCTTGGATGCAGTGATGAGATACTAACTATTATAGCTATGATACAAACTGGGAACATTTTCTATAGGCCAAGAGAAAAACAGGCTCAGGCTGATCAAAAGAGGGCCAAGTTTTTCCAGCCAGAGGGGGATCATCTAACTCTGCTTGCTGTATATGAGGCGTGGAAGGCAAAAAACTTTTCAGGGCCCTGGTGTTTTGAGAACTTTGTTCAATCAAGATCCTTAAGGAGAGCTCAAGATGTGAGGAAGCAGCTTCTCACTATCATGGACAGATATAAATTGGATGTTGTCTCAGCTGGGAGGAACTTCACAAAAATAAGGAAAGCAATCACTGCCGGCTTCTTTTTCCACGCTGCCAGGAAGGATCCCCAGGAGGGATACAGAACCTTGGTAGAGAACCAGCCGGTGTACATACACCCGAGCAGCGCATTGTTCCAGCGGCAGCCAGACTGGGTCATCTACCACGAACTTGTAATGACGACGAAGGAGTACATGCGGGAGGTTACCGTGATCGACCCGAAGTGGCTTACTGAGCTAGCCCCGAGATTCTACAAGTCAGCAGACCCAACCAAGATGAGCAAGAGGAAGAGGCAGGAGAGGATTGAACCCCTGTACGACAGGTACCATGAGCCCAACTCCTGGCGTCTCAGCAAGCGCCGAGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAPTAAAAGPSDDGLRKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRDSASVADFDTKLKANGADLPDYFVRTLLTIIHAILPPPSDSRNPSSASQPAAGGSKFPGLSRPDDPDRARNLRLELERDAEEAAATAAPAPARDDRGRRRDERGRDRGRDDRGRDDRGRDRDYERGGRDHDRSRGRDRDHGRDRDRDRACDGDRQRGRDYGRDRDQDRDHDRDREGEWRRDRDKDRGRDIDRDMDRDHRRGRRYDDEEEPEQFGGRKEGALVNSSGEPELYQVYRGRVTRVMDTGCFVRLEDVRGGREGLVHISQMATRRVANAKEMVKRDQEVYVKVVSVKGQKLSLSMRDVDQDTGRDLLPIQRGGDDAPRANPSGGSASGVGVGSGKRLGLSGIMIAEEDEVAPPSRRPLKRMSSPERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFSIDMSPVKIFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKGLGKDVPELIILPVYSALPSEMQSKIFDPAPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKINVYNSKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGSTVLNMKAMGINDLLSFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLTELAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA</aaseq>

Gene Sequence

<dnaseqindica>1..3329#4572..4965#ATGGCGCCGACGGCGGCGGCGGCGGGGCCCAGCGACGACGGACTCCGGAAGCTGGAGTACCTCTCGCTGGTCTCCAAGGTGTGCTCGGAGCTGGAGACCCACATCGGCGTCGGCGACAAGGTGCTCGCCGAGTTCATCACCGAGCTCGGCCGCGACTCCGCCTCCGTCGCCGACTTCGACACCAAGCTCAAGGCCAACGGCGCCGACCTCCCGGACTACTTCGTCCGCACCCTCCTCACCATCATCCACGCCATTCTCCCGCCGCCCTCCGACTCCCGCAACCCTAGCTCCGCGTCGCAGCCCGCCGCGGGGGGCTCCAAGTTCCCCGGCCTCTCCCGCCCCGACGACCCCGACCGCGCCCGCAACCTCCGCCTCGAGCTCGAGCGGGACGCCGAAGAGGCCGCCGCGACGGCAGCCCCCGCCCCCGCCAGGGACGACCGCGGCCGCCGCCGTGATGAGCGAGGACGGGACCGGGGTCGAGATGACCGCGGCCGCGACGACCGTGGGCGTGACCGCGACTATGAACGCGGCGGCCGTGACCATGACCGCAGCCGTGGCCGGGATCGTGACCATGGCCGTGACAGAGACCGAGATCGAGCCTGTGATGGGGATCGACAACGTGGCCGTGACTATGGCCGTGATAGAGACCAAGACAGAGATCACGATAGGGATCGTGAAGGTGAATGGCGGAGGGACCGAGATAAGGATAGGGGTAGAGACATTGACAGAGATATGGACAGGGACCATAGGCGAGGCAGGAGGTATGATGATGAGGAAGAACCAGAACAGTTTGGTGGAAGGAAAGAAGGCGCTCTTGTGAATTCCAGTGGTGAGCCAGAGTTGTACCAGGTGTACCGGGGTAGGGTGACACGGGTAATGGACACCGGTTGCTTTGTCAGGCTTGAGGATGTTCGTGGAGGACGTGAGGGTCTTGTTCACATCTCACAAATGGCAACCAGGCGAGTGGCCAATGCGAAAGAGATGGTGAAGCGTGATCAGGAGGTGTATGTTAAGGTGGTTTCCGTGAAGGGCCAGAAATTGAGTTTATCAATGAGGGACGTAGATCAGGATACAGGGAGAGATCTCCTGCCAATACAACGTGGTGGGGATGATGCACCAAGGGCGAACCCATCTGGTGGTAGTGCTAGTGGTGTTGGTGTGGGCTCTGGCAAGAGGCTGGGTCTCTCTGGGATTATGATTGCAGAGGAGGATGAGGTTGCACCTCCTTCACGTCGGCCACTTAAGCGGATGAGCTCTCCAGAGAGGTGGGAGGCGAAGCAGCTGATTGCTTCAGGTGTTCTGGATGTGAGGGATTACCCAATGTTTGATGAGGATGGGGATGGTATGTTGTACCAAGAGGAAGGGGCAGAAGAGGAGCAGGAGATTGAGCTTAATGAAGATGAACCTGCTTTCTTGCAGGGACAGAGTAGATTTTCGATTGACATGTCACCTGTTAAGATTTTCAAGAATCCAGAGGGCTCATTGAGCCGAGCAGCTGCTCTCCAAACTGCTCTCATAAAGGAGCGGCGTGAGGTTCGGGAACAGGAACAGAGAGCAATGTTGGATTCAATCCCCAAGGATCTGAATCGGCCATGGGAGGACCCTATGCCTGATACTGGGGAACGGCACCTTGCGCAGGAGCTGAGGGGTGTTGGACTTTCAGCTTATGACATGCCTGAATGGAAGAAAGAAGCCTATGGAAAGGCTCTGACATTTGGGCAAAGGTCTAAGCTTTCAATACAAGACCAGAGGCAAAGTCTTCCAATATACAAGTTGAAGAAAGAGCTGATACAAGCTGTGCATGATAACCAAGTCTTGGTTGTTATTGGAGAGACTGGTTCTGGTAAAACAACACAGGTGACACAATATTTGGCCGAAGCAGGCTACACGACCAGAGGTAAGATTGGTTGCACTCAACCTCGTCGTGTGGCTGCAATGTCTGTTGCTAAGAGAGTAGCAGAAGAATTTGGTTGTCGACTTGGAGAGGAAGTTGGTTATGCCATCCGCTTTGAGGATTGCACTGGGCCTGACACGGTAATCAAATACATGACTGATGGCATGCTTTTGCGTGAGATTCTTGTCGATGAGAACCTTTCCCAGTATTCTGTAATTATGCTTGATGAAGCGCATGAAAGGACCATACACACAGATGTTCTCTTTGGCTTGCTGAAACAGCTTATTAAGCGCAGATCTGACATGAGGCTTATTGTTACTTCTGCTACCCTGGACGCAGAGAAGTTCTCAGGGTATTTTTTCAATTGCAACATCTTCACAATTCCTGGAAGGACGTTCCCGGTAGAGATACTCTACACCAAACAACCAGAAAGTGACTATTTGGATGCAGCATTGATCACCGTGCTTCAAATACACTTGACTGAGCCAGAAGGTGATATCCTCCTTTTTTTGACTGGTCAAGAGGAGATTGATCATGCTTGTCAATGTCTTTATGAGAGGATGAAAGGGCTAGGGAAGGATGTTCCTGAGCTCATAATATTGCCTGTTTATAGTGCTCTTCCGAGTGAAATGCAGTCGAAAATCTTTGACCCAGCTCCTCCAGGGAAGAGGAAGGTTGTTGTGGCCACCAATATCGCTGAAGCTTCTCTAACCATTGACGGCATATATTATGTCGTCGATCCTGGTTTTGCCAAAATTAATGTTTATAATTCAAAACAAGGACTCGATTCATTGGTCATCACTCCAATCTCTCAAGCATCAGCGAAGCAGAGGGCAGGGCGTGCTGGGCGTACTGGCCCTGGCAAATGCTATCGTCTATACACTGAAAGTGCATACCGCAATGAAATGTCTCCCACAACAATCCCAGAAATTCAAAGGATTAACTTGGGGTCTACAGTTCTCAACATGAAGGCGATGGGAATCAATGACCTATTATCCTTTGATTTCATGGACCCTCCTGCACCTCAAGCACTTATATCTGCAATGGAGCAATTGTACAGCCTAGGTGCTCTTGATGAAGAAGGGCTCCTTACCAAACTGGGGAGGAAAATGGCTGAATTTCCACTGGATCCACCACTTTCGAAGATGCTTCTAGCCAGCGTTGACCTTGGATGCAGTGATGAGATACTAACTATTATAGCTATGATACAAACTGGGAACATTTTCTATAGGCCAAGAGAAAAACAGGCTCAGGCTGATCAAAAGAGGGCCAAGTTTTTCCAGCCAGAGGGGGATCATCTAACTCTGCTTGCTGTATATGAGGCGTGGAAGGCAAAAAACTTTTCAGGGCCCTGGTGTTTTGAGAACTTTGTTCAATCAAGATCCTTAAGGAGAGCTCAAGATGTGAGGAAGCAGCTTCTCACTATCATGGACAGGTAACTATTTAATTTTCAGTGGTTTGAACTAAAATCCTCTGTGAAGATATATATTCTTTGACTTGTATTCTTGTTAGTTTGCCGTGTACATAGGTCAATTTCTTCCAAGCTTGGTTTGCCTTCAGATTACTCTGAGTTCCTTGCTCTCCCCATTTGATTTAGATTATTGAGCGGATTAAATCGAATATTTTGGGAAATAAACTTAGCAAATAGCTTAAAACAAGTGGTCAATGCAGTACAAGAAAGTTTTTGAGGCAATGTATTTTCTTTTGAAGCATAGAGCAAATAATCCGTTTCAATAATCCAACGTATTATCTGAAAAAGAACATTTTATATTATTGTCATCAATTGCCTGGTTTATTACGTTAGCATTCTTCATGTCTTAACCCAGTTGAGCTTTTCTGATTTTTAGTTAAAAGAAAAGCATAGTAGTCAAAAAAAGAACATGCTGCAATTACTTCGAAAAAGGGAGTAGGGAGGTGATGATAACTTGACCTACCCAAGGCCCAAGTTTAGATATTTTTTACTACAATTTATGTAGCTGGGTGTTTGTTATTTGTAAAATAATAGAAAAATAGTAATCTTTGCATATGAGTATATGTAGGTGGTCAGTTCTTCTATAATAATGTATACAAGTTCTAGATTTGAGGATAACTTGTTGCATTTATATTTTATTTTAGACTTGTAGTTTATTTAGTTGGGGCTCATTGCAAATTGAAACACCTAGGGCATATGCAATTATGCATTGCATTGTGACAAGATGTATACTAAAGACATAACCATAAAAAAAGCAAAGTATGCATGGTAATTTGTATTACACTTTATTTCAACAATATGGGAGTTAGATCTGAAACTGGGTTGCATAATTAACAGTTTGCCCCGCAGTATTTACTTGATACCATGTTATTATTCATCAGGGTTTTGCATAGTTTACAGTTTGCCCCCACAGTATTTACTTGATTGTGTGTAATTCATCAAATGGGGTTGATATATTAGTTTCTGTGGATGGACTATACTATTCGATCCCTTTGTTGTTGTTTTAGAAATAAAAATCTCAAGAGAAATTATTAGAGAATTGCTTCACTTGTTACCTGCTCTGTGATCGAGGTCTTTTGACCATTCTAGTTTTAATAGCATATTCCACCTTTTTAGATGAGCTGTTATGTCTTATGAGTTTTTCTTTTAAACGAGGGCATCTTATGAGTTCCATCGTTATACTAACGAATTCCGTGATTTTTGCAGATATAAATTGGATGTTGTCTCAGCTGGGAGGAACTTCACAAAAATAAGGAAAGCAATCACTGCCGGCTTCTTTTTCCACGCTGCCAGGAAGGATCCCCAGGAGGGATACAGAACCTTGGTAGAGAACCAGCCGGTGTACATACACCCGAGCAGCGCATTGTTCCAGCGGCAGCCAGACTGGGTCATCTACCACGAACTTGTAATGACGACGAAGGAGTACATGCGGGAGGTTACCGTGATCGACCCGAAGTGGCTTACTGAGCTAGCCCCGAGATTCTACAAGTCAGCAGACCCAACCAAGATGAGCAAGAGGAAGAGGCAGGAGAGGATTGAACCCCTGTACGACAGGTACCATGAGCCCAACTCCTGGCGTCTCAGCAAGCGCCGAGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008021